lineage | Count |
---|---|
lineage3 | 2 |
lineage1.1.1 | 1 |
lineage4.3.3 | 4 |
lineage4.1.2.1 | 2 |
lineage2.2.1 | 9 |
lineage1.2.2.2 | 1 |
lineage3.1.1 | 1 |
lineage4.5 | 1 |
lineage4.3.2 | 1 |
lineage4.8 | 4 |
lineage9 | 1 |
La2 | 2 |
lineage1.2.1.2.1 | 1 |
lineage4.4.2 | 2 |
lineage2.2.1.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.3.4.2 | 2 |
lineage4.1.1.3 | 1 |
La1.2.BCG | 1 |
lineage1.1.3.2 | 1 |
lineage4.1.2 | 1 |
lineage4.4.1.1 | 1 |
La1.2 | 1 |
spoligotype | Count |
---|---|
None | 42 |
ID | Drug resistance | Lineage | Country iso2 | ERR4796886 | Sensitive | lineage3 | in | SRR14519760 | Other | lineage1.1.1 | None | ERR9119668 | Sensitive | lineage4.3.3 | None | ERR7911443 | MDR-TB | lineage4.3.3 | za | ERR11068951 | Sensitive | lineage4.1.2.1 | None | ERR4796660 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797122 | Sensitive | lineage1.2.2.2 | None | ERR9286137 | Sensitive | lineage3.1.1 | None | ERR11773815 | Pre-XDR-TB | lineage2.2.1 | None | SRR14519645 | Other | lineage4.5 | None | ERR11252555 | Sensitive | lineage4.3.2 | None | ERR13273023 | Sensitive | lineage4.8 | None | SRR29440608 | Sensitive | lineage9 | None | ERR4796690 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830169 | Sensitive | lineage2.2.1 | None | SRR14782807 | Sensitive | lineage4.3.3 | None | ERR11050505 | Sensitive | La2 | None | SRR14519687 | Sensitive | lineage1.2.1.2.1 | None | DRR473679 | Other | lineage2.2.1 | None | SRR24256222 | Pre-XDR-TB | lineage2.2.1 | None | SRR14519812 | Sensitive | lineage4.4.2 | None | ERR4796887 | Sensitive | lineage4.8 | in | ERR11775006 | Sensitive | lineage2.2.1.1 | None | SRR29440844 | Sensitive | lineage4.3.4.2.1 | None | SRR19303961 | Sensitive | lineage4.1.2.1 | None | ERR11082583 | Sensitive | lineage4.3.4.2 | None | ERR4796708 | Sensitive | lineage3 | in | ERR5530522 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR11049124 | Sensitive | lineage4.3.3 | None | DRR473680 | Sensitive | lineage2.2.1 | None | ERR11775009 | RR-TB | lineage4.1.1.3 | None | ERR4796947 | Pre-XDR-TB | lineage2.2.1 | in | ERR11049655 | Other | La1.2.BCG | None | ERR10430704 | Sensitive | La2 | None | ERR11775022 | RR-TB | lineage1.1.3.2 | None | SRR14520137 | Sensitive | lineage4.4.2 | None | SRR18715373 | Sensitive | lineage4.8 | None | ERR7911217 | RR-TB | lineage4.1.2 | za | SRR14520136 | Sensitive | lineage4.4.1.1 | None | SRR19304096 | Other | La1.2 | None | ERR11082168 | Sensitive | lineage4.8 | None | SRR23938602 | MDR-TB | lineage2.2.1 | None |
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