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SRA data
Rv1979c
- c.-593C>T
Drug resistance types
41 Sensitive
2 RR-TB
4 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.8
26
lineage4.1.2.1
17
lineage2.2.1;lineage4.3.3;lineage4.8
2
lineage1.2.2.1
1
lineage2.2.1
1
lineage4.5
1
Showing 1 to 6 of 6 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
48
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR026475
Sensitive
lineage4.8
nl
ERR029201
Sensitive
lineage4.8
nl
ERR11044440
HR-TB
lineage4.1.2.1
None
ERR11044584
Sensitive
lineage4.8
None
ERR11067372
HR-TB
lineage4.8
None
ERR11081424
Sensitive
lineage4.1.2.1
None
ERR11252427
Sensitive
lineage1.2.2.1
None
ERR12268378
Sensitive
lineage4.1.2.1
None
ERR12268401
Sensitive
lineage4.8
None
ERR13262253
Sensitive
lineage4.8
None
Showing 1 to 10 of 48 entries
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