Rv1979c - c.-8682_*660del


Drug resistance types
0 Sensitive 2 RR-TB 273 HR-TB 5 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 114 Other
lineage Counts
lineage Count
La1.2.BCG 394
spoligotype Counts
spoligotype Count
None 394
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR29053017 HR-TB La1.2.BCG None
ERR13264774 HR-TB La1.2.BCG None
ERR13292142 HR-TB La1.2.BCG None
SRR29356726 HR-TB La1.2.BCG None
SRR17592374 HR-TB La1.2.BCG None
SRR18911455 HR-TB La1.2.BCG None
ERR766230 Other La1.2.BCG None
ERR13291881 HR-TB La1.2.BCG None
SRR7983756 Other La1.2.BCG None
ERR13291264 HR-TB La1.2.BCG None
SRR28858627 HR-TB La1.2.BCG None
ERR4819826 HR-TB La1.2.BCG None
ERR4820186 HR-TB La1.2.BCG None
SRR7069595 Other La1.2.BCG None
SRR7069803 Other La1.2.BCG None
SRR29053151 HR-TB La1.2.BCG None
SRR5485728 Other La1.2.BCG None
SRR6046018 Other La1.2.BCG None
SRR7069945 HR-TB La1.2.BCG None
SRR7086713 HR-TB La1.2.BCG None
SRR9596060 HR-TB La1.2.BCG None
SRR29356648 HR-TB La1.2.BCG None
SRR16089905 HR-TB La1.2.BCG None
SRR29053554 HR-TB La1.2.BCG None
ERR11068638 HR-TB La1.2.BCG None
SRR29053501 HR-TB La1.2.BCG None
SRR28868363 HR-TB La1.2.BCG None
SRR28859795 HR-TB La1.2.BCG None
SRR13180304 Other La1.2.BCG None
SRR6045637 Other La1.2.BCG None
ERR766246 Other La1.2.BCG None
ERR4821698 Other La1.2.BCG None
ERR766226 Other La1.2.BCG None
SRR29356637 HR-TB La1.2.BCG None
ERR13285482 HR-TB La1.2.BCG None
SRR27450158 Other La1.2.BCG None
SRR8886988 Other La1.2.BCG None
SRR29341496 HR-TB La1.2.BCG None
ERR13292407 HR-TB La1.2.BCG None
ERR13292272 HR-TB La1.2.BCG None
ERR766257 HR-TB La1.2.BCG None
ERR13285494 HR-TB La1.2.BCG None
SRR16058141 HR-TB La1.2.BCG None
ERR766270 Other La1.2.BCG None
SRR29053494 HR-TB La1.2.BCG None
SRR28868774 HR-TB La1.2.BCG None
ERR11068388 Other La1.2.BCG None
SRR1166866 Other La1.2.BCG None
ERR13291916 HR-TB La1.2.BCG None
SRR7086711 HR-TB La1.2.BCG None
SRR9596063 Other La1.2.BCG None
SRR7221299 HR-TB La1.2.BCG None
SRR7070034 Other La1.2.BCG None
SRR28859748 HR-TB La1.2.BCG None
ERR11044379 HR-TB La1.2.BCG None
SRR16058264 HR-TB La1.2.BCG None
SRR27450601 HR-TB La1.2.BCG None
SRR27450620 HR-TB La1.2.BCG None
ERR9125581 HR-TB La1.2.BCG None
ERR4821440 HR-TB La1.2.BCG None
SRR28859744 HR-TB La1.2.BCG None
SRR28858511 HR-TB La1.2.BCG None
SRR8102332 HR-TB La1.2.BCG None
ERR13285634 HR-TB La1.2.BCG None
ERR13285653 HR-TB La1.2.BCG None
SRR15676439 HR-TB La1.2.BCG None
SRR13180318 Other La1.2.BCG None
SRR27450605 HR-TB La1.2.BCG None
SRR29056296 HR-TB La1.2.BCG None
SRR9596069 RR-TB La1.2.BCG None
SRR7070076 Other La1.2.BCG None
SRR29053411 HR-TB La1.2.BCG None
SAMN02414848 HR-TB La1.2.BCG se
SRR7221303 Other La1.2.BCG None
ERR13291985 HR-TB La1.2.BCG None
SRR14782465 Other La1.2.BCG None
SRR1167144 HR-TB La1.2.BCG None
SRR13399335 HR-TB La1.2.BCG None
SRR27450603 HR-TB La1.2.BCG None
ERR13291374 HR-TB La1.2.BCG None
SRR9596061 HR-TB La1.2.BCG None
SRR29053624 HR-TB La1.2.BCG None
SRR7070062 MDR-TB La1.2.BCG None
SRR29050624 HR-TB La1.2.BCG None
ERR2514832 HR-TB La1.2.BCG None
SRR14782268 Other La1.2.BCG None
ERR766248 Other La1.2.BCG None
ERR400388 HR-TB La1.2.BCG None
SRR7069581 Other La1.2.BCG None
ERR4195591 HR-TB La1.2.BCG None
ERR4819451 HR-TB La1.2.BCG None
ERR4821547 Other La1.2.BCG None
ERR766260 Other La1.2.BCG None
SRR16100722 HR-TB La1.2.BCG None
SRR28409343 Other La1.2.BCG None
ERR4820009 Other La1.2.BCG gb
ERR4818051 HR-TB La1.2.BCG None
SRR17592387 HR-TB La1.2.BCG None
ERR11050992 HR-TB La1.2.BCG None
ERR11044748 HR-TB La1.2.BCG None
SRR13399333 HR-TB La1.2.BCG None
ERR11067586 HR-TB La1.2.BCG None
SRR7070164 HR-TB La1.2.BCG None
ERR11050679 HR-TB La1.2.BCG None
ERR4819463 HR-TB La1.2.BCG None
SRR28858615 HR-TB La1.2.BCG None
SRR27450272 HR-TB La1.2.BCG None
ERR13285525 HR-TB La1.2.BCG None
ERR766217 HR-TB La1.2.BCG None
ERR766239 HR-TB La1.2.BCG None
ERR766256 HR-TB La1.2.BCG None
ERR766261 HR-TB La1.2.BCG None
ERR4816090 HR-TB La1.2.BCG None
ERR4822113 HR-TB La1.2.BCG None
SRR9596062 HR-TB La1.2.BCG None
SRR28868737 HR-TB La1.2.BCG None
SRR13399341 HR-TB La1.2.BCG None
SRR28409494 HR-TB La1.2.BCG None
SRR17592386 HR-TB La1.2.BCG None
SRR13180347 Other La1.2.BCG None
SRR27450621 Other La1.2.BCG None
SRR6045990 HR-TB La1.2.BCG None
SRR10232121 Other La1.2.BCG None
SRR13180244 HR-TB La1.2.BCG None
SRR9596070 Other La1.2.BCG None
SRR13399336 Other La1.2.BCG None
SRR7070400 HR-TB La1.2.BCG None
ERR4816886 Other La1.2.BCG None
ERR4818639 HR-TB La1.2.BCG None
ERR11067938 HR-TB La1.2.BCG None
ERR11067380 Other La1.2.BCG None
SRR27450379 Other La1.2.BCG None
SRR16089681 Other La1.2.BCG None
ERR766245 Other La1.2.BCG None
SRR14801882 Other La1.2.BCG None
SRR13399332 HR-TB La1.2.BCG None
SRR14782719 HR-TB La1.2.BCG None
SRR15676435 Other La1.2.BCG None
ERR387001 Other La1.2.BCG None
SRR7086718 HR-TB La1.2.BCG None
ERR4820780 MDR-TB La1.2.BCG gb
ERR11050474 HR-TB La1.2.BCG None
ERR11067503 HR-TB La1.2.BCG None
ERR11068110 HR-TB La1.2.BCG None
SRR9596064 HR-TB La1.2.BCG None
SRR7086717 Other La1.2.BCG None
ERR766221 HR-TB La1.2.BCG None
ERR766240 HR-TB La1.2.BCG None
ERR13285663 HR-TB La1.2.BCG None
ERR13291192 HR-TB La1.2.BCG None
ERR11044175 Other La1.2.BCG None
ERR9125787 Other La1.2.BCG None
SRR7070247 HR-TB La1.2.BCG None
SRR29055492 HR-TB La1.2.BCG None
SRR14781940 Other La1.2.BCG None
SRR16058167 Other La1.2.BCG None
ERR4821117 Other La1.2.BCG None
SRR28868584 HR-TB La1.2.BCG None
SRR7221302 HR-TB La1.2.BCG None
ERR13285578 HR-TB La1.2.BCG None
SRR29053082 HR-TB La1.2.BCG None
SRR29052893 HR-TB La1.2.BCG None
SRR13180234 HR-TB La1.2.BCG None
SRR13180278 HR-TB La1.2.BCG None
ERR9125703 HR-TB La1.2.BCG None
SRR28868899 HR-TB La1.2.BCG None
SRR29051177 HR-TB La1.2.BCG None
SRR13399340 HR-TB La1.2.BCG None
SRR29052999 HR-TB La1.2.BCG None
ERR11043503 Other La1.2.BCG None
SRR1915478 Other La1.2.BCG None
SRR1735567 Other La1.2.BCG None
ERR4821255 Other La1.2.BCG None
ERR11049842 Other La1.2.BCG None
SRR29053016 HR-TB La1.2.BCG None
SRR13180373 HR-TB La1.2.BCG None
SRR29341494 HR-TB La1.2.BCG None
ERR9899661 Other La1.2.BCG None
SRR10997355 HR-TB La1.2.BCG None
SRR17592375 HR-TB La1.2.BCG None
ERR4817646 Other La1.2.BCG None
SRR6046156 HR-TB La1.2.BCG None
SRR29356616 HR-TB La1.2.BCG None
SRR10997357 HR-TB La1.2.BCG None
SRR7086712 HR-TB La1.2.BCG None
SRR18911229 Other La1.2.BCG None
SRR1735707 HR-TB La1.2.BCG None
ERR757417 HR-TB La1.2.BCG None
ERR766214 HR-TB La1.2.BCG None
SRR27450273 HR-TB La1.2.BCG None
SRR28409549 HR-TB La1.2.BCG None
SRR14782003 Other La1.2.BCG None
SRR27450474 Other La1.2.BCG None
SRR28409495 HR-TB La1.2.BCG None
SRR7069083 Other La1.2.BCG None
ERR13285488 HR-TB La1.2.BCG None
SRR29055405 HR-TB La1.2.BCG None
SRR1162747 HR-TB La1.2.BCG None
ERR551427 HR-TB La1.2.BCG None
SRR17592380 HR-TB La1.2.BCG None
ERR4821748 Other La1.2.BCG None
SRR29055396 HR-TB La1.2.BCG None
ERR9121663 HR-TB La1.2.BCG None
ERR766263 Other La1.2.BCG None
SRR29055424 HR-TB La1.2.BCG None
SRR7069887 Other La1.2.BCG None
SRR28858729 HR-TB La1.2.BCG None
SRR29053365 HR-TB La1.2.BCG None
ERR13285408 HR-TB La1.2.BCG None
SRR1915485 Other La1.2.BCG None
SRR28868612 HR-TB La1.2.BCG None
SRR8234778 HR-TB La1.2.BCG None
SRR18897169 Other La1.2.BCG None
SRR14802224 Other La1.2.BCG None
SRR9596056 MDR-TB La1.2.BCG None
SRR28868704 HR-TB La1.2.BCG None
SRR14802226 Other La1.2.BCG None
SRR7221300 HR-TB La1.2.BCG None
ERR228166 HR-TB La1.2.BCG None
ERR11049744 HR-TB La1.2.BCG None
SRR6046614 Other La1.2.BCG None
SRR14782351 HR-TB La1.2.BCG None
SRR28046229 Other La1.2.BCG None
SRR27450425 HR-TB La1.2.BCG None
SRR28409452 HR-TB La1.2.BCG None
ERR11049843 HR-TB La1.2.BCG None
ERR212052 HR-TB La1.2.BCG mw
SRR10997354 HR-TB La1.2.BCG None
SRR13399338 HR-TB La1.2.BCG None
ERR11049787 HR-TB La1.2.BCG None
ERR4818908 HR-TB La1.2.BCG None
SRR18897163 HR-TB La1.2.BCG None
SRR7221304 HR-TB La1.2.BCG None
ERR4816055 HR-TB La1.2.BCG None
ERR9811808 HR-TB La1.2.BCG None
SRR15676436 HR-TB La1.2.BCG None
SRR6045068 HR-TB La1.2.BCG None
SRR14781838 HR-TB La1.2.BCG None
SRR17592384 HR-TB La1.2.BCG None
SRR7069678 MDR-TB La1.2.BCG None
ERR4814591 HR-TB La1.2.BCG None
SRR28409394 HR-TB La1.2.BCG None
SRR13399330 HR-TB La1.2.BCG None
SRR7069317 HR-TB La1.2.BCG None
ERR11049331 HR-TB La1.2.BCG None
SRR17592381 HR-TB La1.2.BCG None
SRR17592385 HR-TB La1.2.BCG None
ERR13291673 HR-TB La1.2.BCG None
ERR766262 HR-TB La1.2.BCG None
SRR15676437 HR-TB La1.2.BCG None
ERR4822100 Other La1.2.BCG None
SRR7069801 HR-TB La1.2.BCG None
SRR13180379 Other La1.2.BCG None
SRR13767788 HR-TB La1.2.BCG None
SRR27450472 HR-TB La1.2.BCG None
ERR766215 Other La1.2.BCG None
SRR7070364 HR-TB La1.2.BCG None
SRR14782713 Other La1.2.BCG None
SRR7070225 Other La1.2.BCG None
ERR766242 Other La1.2.BCG None
SRR28409508 HR-TB La1.2.BCG None
ERR4817396 RR-TB La1.2.BCG None
SRR17592369 HR-TB La1.2.BCG None
SRR9596058 Other La1.2.BCG None
ERR9125558 Other La1.2.BCG None
SRR7221301 HR-TB La1.2.BCG None
SRR7086715 HR-TB La1.2.BCG None
SRR7496578 Other La1.2.BCG None
SRR5875882 Other La1.2.BCG None
ERR2815610 Other La1.2.BCG None
SRR16058482 Other La1.2.BCG None
ERR11049026 HR-TB La1.2.BCG None
SRR13180338 HR-TB La1.2.BCG None
SRR29052895 HR-TB La1.2.BCG None
ERR11067543 HR-TB La1.2.BCG None
SRR15676433 HR-TB La1.2.BCG None
SRR29053030 HR-TB La1.2.BCG None
SRR7070098 Other La1.2.BCG None
SRR13180287 Other La1.2.BCG None
ERR13291941 HR-TB La1.2.BCG None
SRR1915483 HR-TB La1.2.BCG None
SRR17592368 Other La1.2.BCG None
SRR7070360 HR-TB La1.2.BCG None
SRR28868566 HR-TB La1.2.BCG None
ERR4814840 HR-TB La1.2.BCG None
SRR29055741 HR-TB La1.2.BCG None
SRR13399342 HR-TB La1.2.BCG None
SRR9596059 HR-TB La1.2.BCG None
SRR28868376 HR-TB La1.2.BCG None
SRR29052793 HR-TB La1.2.BCG None
SRR28858407 HR-TB La1.2.BCG None
ERR13285622 HR-TB La1.2.BCG None
ERR9125888 Other La1.2.BCG None
SRR9596057 Other La1.2.BCG None
ERR766243 HR-TB La1.2.BCG None
SRR7070115 HR-TB La1.2.BCG None
SRR7086714 HR-TB La1.2.BCG None
SRR17592378 Other La1.2.BCG None
SRR14782824 Other La1.2.BCG None
SRR16097556 HR-TB La1.2.BCG None
SRR8234774 HR-TB La1.2.BCG None
SRR7069456 HR-TB La1.2.BCG None
SRR29356836 HR-TB La1.2.BCG None
SRR29341497 HR-TB La1.2.BCG None
SRR28858666 HR-TB La1.2.BCG None
ERR234151 HR-TB La1.2.BCG None
ERR766241 Other La1.2.BCG None
ERR13285675 HR-TB La1.2.BCG None
SRR28409351 HR-TB La1.2.BCG None
SRR10997356 Other La1.2.BCG None
SRR1915484 Other La1.2.BCG None
SRR28858692 HR-TB La1.2.BCG None
ERR5102809 HR-TB La1.2.BCG None
ERR766238 Other La1.2.BCG None
ERR9125853 Other La1.2.BCG None
SRR29356837 HR-TB La1.2.BCG None
SRR28858473 HR-TB La1.2.BCG None
SRR21878054 HR-TB La1.2.BCG None
SRR17592383 HR-TB La1.2.BCG None
ERR13285585 HR-TB La1.2.BCG None
SRR29053000 HR-TB La1.2.BCG None
SRR16089408 HR-TB La1.2.BCG None
SRR16089543 Other La1.2.BCG None
SRR13399331 Other La1.2.BCG None
ERR13292155 HR-TB La1.2.BCG None
ERR11049655 Other La1.2.BCG None
SRR1165461 HR-TB La1.2.BCG None
SRR7983754 HR-TB La1.2.BCG None
ERR11049622 Other La1.2.BCG None
SRR10232122 HR-TB La1.2.BCG None
ERR2815602 Other La1.2.BCG None
SRR13180228 HR-TB La1.2.BCG None
ERR11050420 HR-TB La1.2.BCG None
ERR11067742 HR-TB La1.2.BCG None
SRR27450608 Other La1.2.BCG None
SRR27450170 HR-TB La1.2.BCG None
SRR1915487 Other La1.2.BCG None
SRR29055376 HR-TB La1.2.BCG None
SRR13399334 HR-TB La1.2.BCG None
ERR766258 Other La1.2.BCG None
ERR4816052 Other La1.2.BCG None
SRR28375406 Other La1.2.BCG None
SRR9596066 HR-TB La1.2.BCG None
SRR9596067 HR-TB La1.2.BCG None
SRR28409560 Other La1.2.BCG None
SRR28409558 Other La1.2.BCG None
SRR7069368 HR-TB La1.2.BCG None
SRR7069868 HR-TB La1.2.BCG None
SRR17592379 HR-TB La1.2.BCG None
SRR9596065 HR-TB La1.2.BCG None
SRR7070106 MDR-TB La1.2.BCG None
SRR13180348 HR-TB La1.2.BCG None
SRR16089542 HR-TB La1.2.BCG None
SRR29056236 HR-TB La1.2.BCG None
SRR3675315 HR-TB La1.2.BCG None
ERR766247 HR-TB La1.2.BCG None
ERR13285620 HR-TB La1.2.BCG None
SRR17592376 HR-TB La1.2.BCG None
SRR17592377 HR-TB La1.2.BCG None
ERR11067904 HR-TB La1.2.BCG None
ERR13291325 HR-TB La1.2.BCG None
ERR13285341 HR-TB La1.2.BCG None
SRR17592382 HR-TB La1.2.BCG None
SRR7068937 HR-TB La1.2.BCG None
SRR27450471 HR-TB La1.2.BCG None
SRR27450475 HR-TB La1.2.BCG None
ERR766228 Other La1.2.BCG None
ERR11049990 Other La1.2.BCG None
SRR8668953 Other La1.2.BCG None
ERR4829499 HR-TB La1.2.BCG None
SRR16058128 HR-TB La1.2.BCG None
SRR3647355 Other La1.2.BCG None
ERR766222 Other La1.2.BCG None
SRR28859875 HR-TB La1.2.BCG None
ERR766259 Other La1.2.BCG None
SRR10379919 HR-TB La1.2.BCG None
SRR21878053 Other La1.2.BCG None
ERR13285681 HR-TB La1.2.BCG None
SRR27450271 Other La1.2.BCG None
SRR16058186 Other La1.2.BCG None
ERR4820706 HR-TB La1.2.BCG None
SRR9596068 HR-TB La1.2.BCG None
ERR766218 HR-TB La1.2.BCG None
ERR766223 HR-TB La1.2.BCG None
SRR1915486 HR-TB La1.2.BCG None
SRR13180255 HR-TB La1.2.BCG None
ERR1035141 HR-TB La1.2.BCG sa
SRR7069775 HR-TB La1.2.BCG None
SRR7069799 HR-TB La1.2.BCG None
SRR7086716 HR-TB La1.2.BCG None
SRR29052828 HR-TB La1.2.BCG None
SRR8886989 HR-TB La1.2.BCG None
SRR16278275 Other La1.2.BCG None
ERR766244 HR-TB La1.2.BCG None