Rv1979c - c.338delT
Drug resistance types
17 Sensitive
0 RR-TB
2 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2 | 1 |
| lineage3 | 5 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1 | 3 |
| lineage2.2 | 1 |
| lineage4.8 | 5 |
| lineage1.1.1.1 | 2 |
| lineage4;lineage3 | 1 |
| lineage4.1.2.1 | 2 |
| lineage2.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 26 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3561988 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4818286 | Sensitive | lineage3 | gb | ERR11465585 | Sensitive | lineage4.3.4.1 | None | SRR12199418 | Sensitive | lineage2.2.1 | None | SRR11972449 | MDR-TB | lineage2.2 | None | SRR13591449 | Sensitive | lineage4.8 | None | ERR11068824 | Sensitive | lineage4.8 | None | SRR15316295 | Sensitive | lineage2.2.1 | None | DRR261102 | Sensitive | lineage1.1.1.1 | None | ERR1950067 | Sensitive | lineage4.8 | None | SRR1723494 | Other | lineage2.2.1 | cn | ERR4817513 | Sensitive | lineage4;lineage3 | None | ERR2512964 | Sensitive | lineage4.1.2.1 | None | ERR2229398 | Sensitive | lineage4.8 | None | DRR184885 | MDR-TB | lineage1.1.1.1 | vn | ERR11049718 | HR-TB | lineage3 | None | SAMEA2534464 | HR-TB | lineage2.2.2 | kr | SRR4035711 | Sensitive | lineage4.1.2 | None | ERR2513491 | Sensitive | lineage3 | None | ERR025424 | Sensitive | lineage4.1.2.1 | nl | ERR2515154 | Other | lineage4.1.1.3 | None | ERR4829552 | Sensitive | lineage4.8 | it | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4798299 | Sensitive | lineage3 | in | ERR4817231 | Sensitive | lineage3 | gb | SRR6896433 | Other | lineage4.1.1.3 | None |
|---|
