Rv1979c - p.Ala222Thr
Drug resistance types
2 Sensitive
0 RR-TB
46 HR-TB
20 MDR-TB
34 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 93 |
| lineage1.2.1.2.1 | 2 |
| lineage4.3.2;lineage4.1.2.1 | 1 |
| lineage2.2.1 | 2 |
| 1 | |
| lineage4.1 | 1 |
| lineage4 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 102 |
Geographic prevalence
Country level data for this variant is available for 52 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1034789 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR7517809 | MDR-TB | lineage4.1.2.1 | pe | ERR1034731 | HR-TB | lineage4.1.2.1 | pe | ERR3287479 | HR-TB | lineage4.1.2.1 | pe | ERR3287375 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR3287450 | MDR-TB | lineage4.1.2.1 | pe | ERR3287419 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR3287547 | HR-TB | lineage4.1.2.1 | None | ERR3287585 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR3287674 | HR-TB | lineage4.1.2.1 | pe | ERR4811854 | MDR-TB | lineage4.1.2.1 | pe | ERR3287711 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4423718 | MDR-TB | lineage4.1.2.1 | None | ERR3287820 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR3287862 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR3287871 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4423707 | HR-TB | lineage4.1.2.1 | None | ERR4811743 | HR-TB | lineage4.1.2.1 | pe | ERR4812386 | HR-TB | lineage4.1.2.1 | pe | ERR4811881 | HR-TB | lineage4.1.2.1 | pe | ERR4811906 | HR-TB | lineage4.1.2.1 | pe | ERR4812102 | HR-TB | lineage4.1.2.1 | None | ERR4812220 | HR-TB | lineage4.1.2.1 | pe | ERR4812360 | HR-TB | lineage4.1.2.1 | pe | ERR4812441 | HR-TB | lineage4.1.2.1 | pe | ERR6866799 | MDR-TB | lineage4.1.2.1 | None | ERR4812446 | HR-TB | lineage4.1.2.1 | pe | ERR6879045 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR6866809 | HR-TB | lineage4.1.2.1 | None | ERR751391 | HR-TB | lineage4.1.2.1 | pe | ERR751364 | HR-TB | lineage4.1.2.1 | pe | ERR9125304 | Sensitive | lineage1.2.1.2.1 | None | ERR751479 | HR-TB | lineage4.1.2.1 | pe | ERR751532 | HR-TB | lineage4.1.2.1 | pe | ERR775333 | HR-TB | lineage4.1.2.1 | pe | ERR775376 | MDR-TB | lineage4.1.2.1 | pe | ERR779866 | HR-TB | lineage4.1.2.1 | pe | ERR775334 | HR-TB | lineage4.1.2.1 | pe | ERR9029869 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR10808369 | MDR-TB | lineage4.1.2.1 | None | SRR10808353 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR10808539 | MDR-TB | lineage4.1.2.1 | None | SRR10808391 | MDR-TB | lineage4.1.2.1 | None | SRR10808476 | HR-TB | lineage4.1.2.1 | None | SRR10808409 | HR-TB | lineage4.1.2.1 | None | SRR10808514 | HR-TB | lineage4.1.2.1 | None | SRR10808626 | MDR-TB | lineage4.1.2.1 | None | SRR13870372 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4812773 | HR-TB | lineage4.1.2.1 | None | SRR13870394 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR13870413 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR16058290 | Sensitive | lineage1.2.1.2.1 | None | ERR4812769 | HR-TB | lineage4.3.2;lineage4.1.2.1 | pe | SRR13870385 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR15217982 | HR-TB | lineage4.1.2.1 | None | ERR9806918 | MDR-TB | lineage2.2.1 | None | ERR4813717 | MDR-TB | lineage4.1.2.1 | None | ERR4812927 | HR-TB | lineage4.1.2.1 | pe | ERR4812869 | Pre-XDR-TB | None | ERR4813077 | HR-TB | lineage4.1.2.1 | pe | ERR4812926 | HR-TB | lineage4.1.2.1 | pe | ERR4812943 | HR-TB | lineage4.1.2.1 | pe | ERR4812952 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813095 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813096 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813124 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813104 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4813117 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813126 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813133 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813132 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813387 | MDR-TB | lineage4.1.2.1 | pe | ERR4813177 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813202 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813205 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4813230 | HR-TB | lineage4.1 | None | ERR4813176 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813200 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813378 | MDR-TB | lineage4.1.2.1 | pe | ERR2184472 | MDR-TB | lineage4.1.2.1 | pe | ERR4813430 | HR-TB | lineage4.1.2.1 | pe | ERR4813557 | HR-TB | lineage4.1.2.1 | None | ERR4813625 | HR-TB | lineage4.1.2.1 | None | SRR3732591 | MDR-TB | lineage4.1.2.1 | None | SRR3732595 | HR-TB | lineage4 | None | ERR2184253 | MDR-TB | lineage4.1.2.1 | pe | ERR2184273 | MDR-TB | lineage4.1.2.1 | None | ERR2184286 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4813635 | HR-TB | lineage4.1.2.1 | None | ERR2184236 | HR-TB | lineage4.1.2.1 | pe | ERR2184393 | MDR-TB | lineage4.1.2.1 | pe | ERR2510149 | HR-TB | lineage4.1.2.1 | pe | ERR2184494 | HR-TB | lineage4.1.2.1 | pe | ERR2184528 | HR-TB | lineage4.1.2.1 | pe | ERR2510236 | HR-TB | lineage4.1.2.1 | pe | ERR2510161 | HR-TB | lineage4.1.2.1 | pe | ERR2510209 | HR-TB | lineage4.1.2.1 | pe | ERR2516623 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR2516431 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR2516738 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR5535697 | HR-TB | lineage4.1.2 | None | ERR4831554 | MDR-TB | lineage2.2.1 | None |
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