Rv2043c - c.192_193insA
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
95 MDR-TB
31 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.1 | 73 |
| lineage4.3.3 | 4 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage4.1.1.3 | 11 |
| lineage4.2.1 | 3 |
| lineage4.3.4.2 | 2 |
| lineage2.2.2 | 10 |
| lineage2.2.1 | 6 |
| lineage6.3.3 | 1 |
| lineage2.2.1;lineage3.1.2 | 1 |
| lineage4.4.1.1 | 4 |
| lineage1.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.5 | 3 |
| lineage4.1.2.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.8 | 2 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 127 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR7737849 | MDR-TB | lineage3.1.1 | None | SRR29539154 | MDR-TB | lineage4.3.3 | None | SRR14801892 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR7737914 | MDR-TB | lineage3.1.1 | None | ERR6362324 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR7737701 | MDR-TB | lineage3.1.1 | None | SRR29094055 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093848 | MDR-TB | lineage3.1.1 | None | ERR7737779 | MDR-TB | lineage3.1.1 | None | ERR7737916 | MDR-TB | lineage3.1.1 | None | ERR7737901 | MDR-TB | lineage3.1.1 | None | ERR7737742 | MDR-TB | lineage3.1.1 | None | SRR29096353 | MDR-TB | lineage3.1.1 | None | ERR7737821 | MDR-TB | lineage3.1.1 | None | ERR7737829 | MDR-TB | lineage3.1.1 | None | SRR7645791 | MDR-TB | lineage4.2.1 | None | ERR11044605 | MDR-TB | lineage3.1.1 | None | ERR275182 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR29093285 | MDR-TB | lineage3.1.1 | None | SRR29096894 | MDR-TB | lineage3.1.1 | None | ERR7737835 | MDR-TB | lineage3.1.1 | None | SRR29093652 | MDR-TB | lineage3.1.1 | None | SRR29093782 | MDR-TB | lineage3.1.1 | None | SRR29096486 | MDR-TB | lineage3.1.1 | None | ERR7737891 | MDR-TB | lineage3.1.1 | None | SAMN02360559 | Pre-XDR-TB | lineage2.2.2 | kr | ERR551236 | MDR-TB | lineage2.2.1 | None | ERR4810998 | Pre-XDR-TB | lineage2.2.1 | cn | ERR3287867 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR3287883 | MDR-TB | lineage4.1.1.3 | pe | ERR7737884 | MDR-TB | lineage3.1.1 | None | ERR4830816 | Pre-XDR-TB | lineage3.1.1 | et | ERR7911046 | MDR-TB | lineage4.2.1 | md | SRR2075823 | Pre-XDR-TB | lineage2.2.2 | None | ERR551070 | HR-TB | lineage6.3.3 | None | ERR4819373 | MDR-TB | lineage3.1.1 | gb | SRR2075822 | Pre-XDR-TB | lineage2.2.2 | None | ERR7737935 | MDR-TB | lineage3.1.1 | None | ERR7737863 | MDR-TB | lineage3.1.1 | None | ERR6362916 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR2075818 | Pre-XDR-TB | lineage2.2.2 | None | SRR29093707 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4797638 | Pre-XDR-TB | lineage2.2.1;lineage3.1.2 | in | ERR9907672 | MDR-TB | lineage4.4.1.1 | None | ERR7737825 | MDR-TB | lineage3.1.1 | None | ERR3077943 | MDR-TB | lineage1.1.2 | None | ERR7737794 | MDR-TB | lineage3.1.1 | None | ERR7737687 | MDR-TB | lineage3.1.1 | None | SRR1013560 | Pre-XDR-TB | lineage2.2.2 | None | SRR2075817 | Pre-XDR-TB | lineage2.2.2 | None | ERR2145520 | MDR-TB | lineage4.2.2.2 | None | ERR2245421 | MDR-TB | lineage3.1.1 | no | SRR14781993 | MDR-TB | lineage4.2.1 | None | ERR7737810 | MDR-TB | lineage3.1.1 | None | SRR29096512 | MDR-TB | lineage3.1.1 | None | ERR7737754 | MDR-TB | lineage3.1.1 | None | SRR29093523 | MDR-TB | lineage3.1.1 | None | SRR29096586 | MDR-TB | lineage3.1.1 | None | ERR7737668 | MDR-TB | lineage3.1.1 | None | SRR24255993 | MDR-TB | lineage4.3.3 | None | SRR25207217 | Pre-XDR-TB | lineage2.2.1 | None | ERR551235 | MDR-TB | lineage2.2.1 | None | SRR29093660 | MDR-TB | lineage3.1.1 | None | ERR9119869 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1048859 | Pre-XDR-TB | lineage2.2.2 | None | SRR30182619 | MDR-TB | lineage4.4.2 | None | ERR9907773 | MDR-TB | lineage4.4.1.1 | None | SRR30180476 | MDR-TB | lineage4.5 | None | SRR29093798 | MDR-TB | lineage3.1.1 | None | SRR29094056 | MDR-TB | lineage3.1.1 | None | ERR7737694 | MDR-TB | lineage3.1.1 | None | ERR7737908 | MDR-TB | lineage3.1.1 | None | SRR29093751 | MDR-TB | lineage3.1.1 | None | ERR9907800 | MDR-TB | lineage4.4.1.1 | None | SRR29093273 | MDR-TB | lineage3.1.1 | None | SRR29053129 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093265 | MDR-TB | lineage3.1.1 | None | ERR1035361 | MDR-TB | lineage4.1.2.1 | br | ERR7737861 | MDR-TB | lineage3.1.1 | None | SRR29093648 | MDR-TB | lineage3.1.1 | None | SRR29096341 | MDR-TB | lineage3.1.1 | None | SRR21279460 | MDR-TB | lineage4.5 | None | SRR2075820 | Pre-XDR-TB | lineage2.2.2 | None | SRR29096556 | MDR-TB | lineage3.1.1 | None | ERR7737870 | MDR-TB | lineage3.1.1 | None | ERR4797854 | MDR-TB | lineage3.1.2 | in | SRR16370418 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR28394237 | MDR-TB | lineage4.1.1.3 | None | SRR28393385 | MDR-TB | lineage4.3.3 | None | ERR4830817 | Pre-XDR-TB | lineage3.1.1 | et | ERR4830811 | MDR-TB | lineage3.1.1 | et | ERR4830836 | MDR-TB | lineage3.1.1 | et | ERR4830790 | Pre-XDR-TB | lineage3.1.1 | et | ERR4830800 | MDR-TB | lineage3.1.1 | et | ERR4830818 | Pre-XDR-TB | lineage3.1.1 | et | ERR4830823 | Pre-XDR-TB | lineage3.1.1 | et | SRR1013559 | Pre-XDR-TB | lineage2.2.2 | None | ERR2510701 | MDR-TB | lineage3.1.1 | it | ERR9907674 | MDR-TB | lineage4.4.1.1 | None | SAMEA2533795 | MDR-TB | lineage2.2.1 | None | ERR2851369 | MDR-TB | lineage3.1.1 | lb | ERR2516908 | MDR-TB | lineage3.1.1 | gb | ERR2517003 | MDR-TB | lineage3.1.1 | gb | ERR2516634 | MDR-TB | lineage3.1.1 | nl | SRR21747055 | MDR-TB | lineage4.5 | None | ERR1035192 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR7737744 | MDR-TB | lineage3.1.1 | None | ERR7737899 | MDR-TB | lineage3.1.1 | None | SRR29096605 | MDR-TB | lineage3.1.1 | None | SRR29093331 | MDR-TB | lineage3.1.1 | None | SRR29093544 | MDR-TB | lineage3.1.1 | None | SRR3105730 | MDR-TB | lineage4.8 | None | ERR7737632 | MDR-TB | lineage3.1.1 | None | ERR7737695 | MDR-TB | lineage3.1.1 | None | SRR10869220 | MDR-TB | lineage2.2.1.1 | None | ERR7737915 | MDR-TB | lineage3.1.1 | None | ERR13259959 | MDR-TB | lineage4.8 | None | SRR1048858 | Pre-XDR-TB | lineage2.2.2 | None | ERR4830786 | Pre-XDR-TB | lineage3.1.1 | et | ERR4830788 | Pre-XDR-TB | lineage3.1.1 | et | SRR18714826 | MDR-TB | lineage4.3.3 | None | ERR7737834 | MDR-TB | lineage3.1.1 | None | ERR7737773 | MDR-TB | lineage3.1.1 | None | ERR7737635 | MDR-TB | lineage3.1.1 | None | ERR7737689 | MDR-TB | lineage3.1.1 | None | ERR4813094 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11798600 | MDR-TB | lineage2.2.1 | None |
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