Rv2043c - c.390_391dupGG
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
4 RR-TB
11 HR-TB
256 MDR-TB
188 Pre-XDR-TB
29 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 42 |
| lineage1.2.2.2 | 6 |
| lineage2.2.1 | 241 |
| lineage4.4.1.1 | 14 |
| lineage4.8 | 20 |
| lineage4.3.3 | 43 |
| lineage4.2.1.1 | 4 |
| lineage4.2.1 | 8 |
| lineage4.9 | 8 |
| lineage4.4.2 | 4 |
| lineage1.2.1.2 | 1 |
| lineage4.1.2.1 | 10 |
| lineage2.2.2 | 7 |
| lineage4.3.4.2 | 7 |
| lineage3.1.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1.1 | 13 |
| lineage4.6.2.2 | 3 |
| lineage2.2.1;lineage3 | 4 |
| lineage3.1 | 6 |
| lineage1.2.2.2;lineage2.2.1 | 1 |
| lineage3.1.2 | 10 |
| lineage4.1.1.3 | 9 |
| lineage4.2.1;lineage4.8 | 1 |
| lineage4.1 | 4 |
| lineage4.1.2.1;lineage4.3.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.2 | 3 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2.1;lineage4.8 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4 | 1 |
| lineage4.3 | 1 |
| lineage4.5 | 1 |
| lineage1.1.3.3;lineage2.2.1;lineage3 | 1 |
| lineage1.1.3.3 | 1 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.2.1.1;lineage4.6.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.6.1.2 | 1 |
| lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 491 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3105731 | Pre-XDR-TB | lineage3 | None | SRR29017175 | MDR-TB | lineage1.2.2.2 | None | SRR13232567 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681409 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049630 | MDR-TB | lineage4.4.1.1 | None | ERR3014590 | Pre-XDR-TB | lineage4.8 | None | SRR29231317 | MDR-TB | lineage4.3.3 | None | ERR4553880 | Pre-XDR-TB | lineage4.8 | None | SRR29231728 | MDR-TB | lineage4.3.3 | None | SRR6257003 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284173 | MDR-TB | lineage2.2.1 | None | SRR1140751 | MDR-TB | lineage4.4.1.1 | None | ERR13290597 | MDR-TB | lineage2.2.1 | None | SRR1163219 | MDR-TB | lineage2.2.1 | None | ERR5866015 | MDR-TB | lineage4.2.1.1 | None | ERR4827934 | MDR-TB | lineage4.2.1 | None | SRR10040201 | MDR-TB | lineage2.2.1 | None | ERR5865126 | MDR-TB | lineage4.3.3 | None | SRR29017650 | Pre-XDR-TB | lineage4.9 | None | SRR13232572 | Pre-XDR-TB | lineage2.2.1 | None | SRR16087947 | MDR-TB | lineage4.3.3 | None | SRR29055936 | MDR-TB | lineage2.2.1 | None | ERR13267078 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069465 | MDR-TB | lineage4.4.2 | None | ERR13291100 | Pre-XDR-TB | lineage1.2.1.2 | None | ERR8665634 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872329 | Pre-XDR-TB | lineage4.2.1 | None | SRR12420278 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017442 | Pre-XDR-TB | lineage4.8 | None | ERR13285165 | MDR-TB | lineage4.1.2.1 | None | SRR20632786 | MDR-TB | lineage2.2.1 | None | ERR5864996 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172250 | Pre-XDR-TB | lineage2.2.1 | None | ERR13243560 | MDR-TB | lineage2.2.2 | None | SRR28044902 | MDR-TB | lineage4.3.4.2 | None | SRR20632774 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827833 | MDR-TB | lineage2.2.1 | None | ERR5865125 | MDR-TB | lineage4.3.3 | None | ERR11488795 | RR-TB | lineage3.1.1 | None | SRR10040368 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR1163037 | MDR-TB | lineage2.2.1 | None | SRR30182434 | MDR-TB | lineage2.2.1 | None | ERR8774357 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119422 | MDR-TB | lineage2.2.1.1 | None | SRR1163303 | MDR-TB | lineage2.2.1 | None | SRR10397185 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002973 | XDR-TB | lineage2.2.1 | None | ERR072082 | MDR-TB | lineage4.8 | None | SRR29289376 | MDR-TB | lineage3 | None | SRR29051306 | Pre-XDR-TB | lineage4.3.3 | None | ERR8665503 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829996 | MDR-TB | lineage4.6.2.2 | None | SRR11972450 | MDR-TB | lineage2.2.1 | None | SRR25827461 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR10465872 | Pre-XDR-TB | lineage2.2.1 | None | SRR29289126 | XDR-TB | lineage3 | None | ERR2510292 | Pre-XDR-TB | lineage3 | pk | ERR4831471 | Pre-XDR-TB | lineage4.8 | pk | ERR4831508 | Pre-XDR-TB | lineage3 | pk | SRR14088365 | XDR-TB | lineage3 | None | SRR24114357 | HR-TB | lineage3.1 | None | ERR4799902 | MDR-TB | lineage1.2.2.2;lineage2.2.1 | None | SRR29289161 | Other | lineage3 | None | SRR29289267 | MDR-TB | lineage3 | None | ERR5865877 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665552 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798635 | Pre-XDR-TB | lineage4.3.3 | in | ERR4798124 | Pre-XDR-TB | lineage2.2.1 | in | SRR29539834 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864991 | MDR-TB | lineage2.2.1 | None | ERR13260663 | Pre-XDR-TB | lineage4.3.3 | None | SRR29772613 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4799659 | MDR-TB | lineage2.2.1.1 | in | SRR28240002 | XDR-TB | lineage4.3.3 | None | ERR4799010 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800084 | Pre-XDR-TB | lineage3.1.2 | in | SRR1165394 | MDR-TB | lineage2.2.1 | None | ERR4797763 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR13266556 | Pre-XDR-TB | lineage3.1.2 | None | SRR13232491 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797035 | Pre-XDR-TB | lineage4.8 | in | SRR958495 | MDR-TB | lineage2.2.1 | None | ERR4800201 | Pre-XDR-TB | lineage3.1 | in | ERR11775736 | MDR-TB | lineage4.3.3 | None | SRR4423137 | Pre-XDR-TB | lineage4.9 | None | ERR552766 | MDR-TB | lineage2.2.1 | None | ERR4896323 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4553668 | Pre-XDR-TB | lineage4.9 | None | SRR14782762 | HR-TB | lineage4.2.1;lineage4.8 | None | SRR1166297 | MDR-TB | lineage4.8 | ro | ERR1664663 | MDR-TB | lineage4.2.1 | None | ERR1664643 | MDR-TB | lineage4.2.1 | None | ERR1664653 | MDR-TB | lineage4.2.1 | None | ERR1035169 | Pre-XDR-TB | lineage2.2.1 | sa | ERR4553866 | Pre-XDR-TB | lineage4.8 | None | ERR4796732 | Pre-XDR-TB | lineage4.9 | in | ERR4831250 | Pre-XDR-TB | lineage2.2.1 | de | ERR5864990 | MDR-TB | lineage2.2.1 | None | ERR4831244 | Pre-XDR-TB | lineage2.2.1 | de | ERR7911107 | MDR-TB | lineage2.2.1 | vn | ERR4831439 | Pre-XDR-TB | lineage3 | None | ERR4831613 | Pre-XDR-TB | lineage2.2.1.1 | vn | ERR7911536 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4831641 | MDR-TB | lineage2.2.1 | vn | ERR8665610 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707030 | MDR-TB | lineage4.3.3 | cd | ERR2707146 | MDR-TB | lineage4.3.3 | cd | ERR4811536 | Pre-XDR-TB | lineage2.2.1 | cn | ERR7911512 | Pre-XDR-TB | lineage2.2.1 | vn | ERR7911518 | MDR-TB | lineage2.2.1 | vn | ERR8665906 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665907 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831465 | Pre-XDR-TB | lineage4.8 | None | ERR4830401 | MDR-TB | lineage2.2.1.1 | vn | ERR8665822 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865124 | MDR-TB | lineage4.3.3 | None | SRR20969367 | MDR-TB | lineage2.2.1 | None | ERR1034594 | MDR-TB | lineage3 | pk | ERR5865721 | MDR-TB | lineage2.2.1 | None | ERR5865876 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040153 | MDR-TB | lineage2.2.1 | None | ERR4831503 | Pre-XDR-TB | lineage3 | None | SRR1162691 | MDR-TB | lineage4.1 | None | SRR1180958 | MDR-TB | lineage2.2.1 | None | SRR1181158 | MDR-TB | lineage2.2.1 | None | SRR2100131 | MDR-TB | lineage4.8 | None | ERR2864220 | MDR-TB | lineage4.2.1 | pt | ERR229936 | MDR-TB | lineage2.2.1 | ru | ERR234649 | MDR-TB | lineage2.2.1 | ru | ERR144635 | MDR-TB | lineage2.2.1 | ru | ERR067586 | HR-TB | lineage2.2.1 | ru | SRR5341273 | MDR-TB | lineage1.2.2.2 | in | SRR5341329 | Pre-XDR-TB | lineage4.8 | in | ERR1352356 | XDR-TB | lineage2.2.1 | cn | ERR1352358 | XDR-TB | lineage2.2.1 | cn | ERR1352353 | XDR-TB | lineage2.2.1 | cn | SRR5152896 | MDR-TB | lineage2.2.1 | None | SRR12142427 | MDR-TB | lineage2.2.2 | None | SRR5341227 | Pre-XDR-TB | lineage4.3.3 | in | SRR6832126 | MDR-TB | lineage4.3.3 | None | SAMN02419550 | MDR-TB | lineage2.2.1 | by | SAMN02419545 | MDR-TB | lineage2.2.1 | by | SRR25827349 | Pre-XDR-TB | lineage2.2.1 | None | SRR26400032 | MDR-TB | lineage2.2.1.1 | None | ERR13290596 | MDR-TB | lineage2.2.1 | None | SRR29016887 | Pre-XDR-TB | lineage4.9 | None | SAMN02086224 | MDR-TB | lineage2.2.1 | None | SRR1049629 | MDR-TB | lineage4.4.1.1 | None | ERR9027230 | MDR-TB | lineage4.1.2.1;lineage4.3.3 | None | ERR5865641 | MDR-TB | lineage4.3.3 | None | SRR3105737 | MDR-TB | lineage1.2.2.2 | None | SRR14270083 | MDR-TB | lineage2.2.1 | None | ERR8665504 | Pre-XDR-TB | lineage2.2.1 | None | ERR9907698 | MDR-TB | lineage4.3.4.2 | None | SRR28044397 | XDR-TB | lineage3 | None | SRR18714889 | MDR-TB | lineage2.2.1 | None | SRR1140729 | MDR-TB | lineage4.4.1.1 | None | ERR688034 | Pre-XDR-TB | lineage3.1.2 | None | SRR14782739 | MDR-TB | lineage2.2.1 | None | ERR11050020 | MDR-TB | lineage4.2.1.1 | None | SRR20969899 | MDR-TB | lineage2.2.1 | None | SRR25207105 | MDR-TB | lineage2.2.1 | None | SRR5153234 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153808 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119279 | HR-TB | lineage2.2.1 | None | SRR29017073 | Pre-XDR-TB | lineage3.1 | None | ERR1352354 | XDR-TB | lineage2.2.1 | cn | SRR13423549 | Pre-XDR-TB | lineage2.2.1 | None | SRR7653612 | HR-TB | lineage2.2.1 | None | ERR5864369 | MDR-TB | lineage2.2.1 | None | ERR4553881 | MDR-TB | lineage1.1.3.1 | None | SRR29772826 | MDR-TB | lineage4.1.2.1 | None | ERR8665651 | MDR-TB | lineage2.2.1 | None | SRR24256023 | MDR-TB | lineage2.2.1 | None | SRR24799244 | MDR-TB | lineage2.2.1 | None | ERR5864997 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035337 | MDR-TB | lineage4.1.2.1 | br | SRR20969756 | MDR-TB | lineage2.2.1 | None | ERR4813604 | Pre-XDR-TB | lineage4.3.3 | None | SRR28498577 | MDR-TB | lineage2.2.1 | None | ERR9806954 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR25207018 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR13232489 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062902 | MDR-TB | lineage4.4.1.1 | None | SRR12142420 | MDR-TB | lineage2.2.2 | None | SRR1162971 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285741 | Pre-XDR-TB | lineage4.2.1 | None | ERR5866239 | MDR-TB | lineage2.2.1 | None | SRR13232575 | Pre-XDR-TB | lineage2.2.1 | None | ERR5897080 | Pre-XDR-TB | lineage3 | None | ERR5979460 | MDR-TB | lineage3 | None | ERR11811378 | MDR-TB | lineage2.2.1 | None | SRR29289422 | MDR-TB | lineage3 | None | SRR6824357 | Pre-XDR-TB | lineage4.4.2 | None | DRR130199 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510445 | Pre-XDR-TB | lineage3 | pk | ERR2510423 | Pre-XDR-TB | lineage3 | pk | ERR2510476 | RR-TB | lineage3 | pk | ERR2510466 | MDR-TB | lineage3 | pk | SRR29289162 | Other | lineage3 | None | SRR29289212 | Other | lineage3 | None | SRR21276922 | MDR-TB | lineage2.2.1 | None | SRR29289277 | Pre-XDR-TB | lineage3 | None | ERR2510472 | MDR-TB | lineage3 | pk | SRR10500315 | Pre-XDR-TB | lineage1.1.2 | None | SRR29051546 | HR-TB | lineage4.3.3 | None | ERR13266683 | MDR-TB | lineage2.2.1 | None | SRR29289362 | Pre-XDR-TB | lineage3 | None | SRR29289382 | XDR-TB | lineage3 | None | SRR13232570 | Pre-XDR-TB | lineage2.2.1 | None | SRR7653084 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796913 | Pre-XDR-TB | lineage4.1.1.3 | in | ERR4796706 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798573 | MDR-TB | lineage4.3.3 | in | SRR13232668 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799898 | MDR-TB | lineage1.2.2.2 | in | ERR5864988 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864994 | MDR-TB | lineage2.2.1 | None | ERR11068969 | MDR-TB | lineage2.2.1 | None | ERR4797868 | Pre-XDR-TB | lineage4.8 | in | ERR4797893 | MDR-TB | lineage4.3.3 | in | ERR4800326 | MDR-TB | lineage2.2.1 | in | ERR4798417 | MDR-TB | lineage2.2.1 | in | ERR3148190 | MDR-TB | lineage4.1.2.1 | mx | ERR13290883 | Pre-XDR-TB | lineage3.1.2 | None | SRR26936983 | MDR-TB | lineage2.2.1 | None | ERR4553650 | Pre-XDR-TB | lineage4.9 | None | ERR5866587 | MDR-TB | lineage2.2.1 | None | SRR10040302 | MDR-TB | lineage2.2.1 | None | ERR3838815 | MDR-TB | lineage4.3.4.2 | None | ERR5897087 | Pre-XDR-TB | lineage3 | None | SAMN02414968 | MDR-TB | lineage2.2.1 | se | SRR4423142 | Pre-XDR-TB | lineage4.9 | None | SRR671754 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13195616 | Pre-XDR-TB | lineage2.2.2 | None | SRR21887696 | MDR-TB | lineage2.2.2 | None | ERR8665690 | Pre-XDR-TB | lineage2.2.1 | None | ERR2864246 | MDR-TB | lineage4.3.4.1 | pt | ERR4810968 | Pre-XDR-TB | lineage2.2.1 | cn | SRR16370536 | MDR-TB | lineage2.2.1 | None | ERR12916923 | XDR-TB | lineage4.3.3 | None | SRR10040235 | MDR-TB | lineage2.2.1 | None | SRR28393632 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR11241400 | Pre-XDR-TB | lineage4.3.3 | None | SRR1159175 | MDR-TB | lineage2.2.1 | None | SRR28393820 | MDR-TB | lineage4.1.2.1;lineage4.4.1.1 | None | ERR11776010 | MDR-TB | lineage4.7 | None | ERR5866014 | MDR-TB | lineage4.2.1.1 | None | SRR28351416 | Pre-XDR-TB | lineage4.3.3 | None | ERR12916928 | XDR-TB | lineage4.3.3 | None | ERR7911108 | MDR-TB | lineage2.2.1 | vn | ERR4822603 | Pre-XDR-TB | lineage2.2.1 | de | ERR4822608 | Pre-XDR-TB | lineage2.2.1 | de | ERR8665838 | Pre-XDR-TB | lineage2.2.1 | None | ERR2706972 | MDR-TB | lineage4.3.3 | cd | ERR7911335 | MDR-TB | lineage2.2.1 | us | ERR4829916 | MDR-TB | lineage4.1.2.1;lineage4.8 | it | ERR7911077 | MDR-TB | lineage4.3.3 | md | ERR4830970 | Pre-XDR-TB | lineage4.2.2.2 | np | ERR4553976 | Pre-XDR-TB | lineage3.1 | None | ERR688013 | Pre-XDR-TB | lineage3.1.2 | None | ERR8665652 | MDR-TB | lineage2.2.1 | None | SRR1049623 | MDR-TB | lineage4.4.1.1 | None | SRR1169113 | MDR-TB | lineage2.2.1 | None | SRR1167079 | MDR-TB | lineage2.2.1 | None | SRR6256968 | MDR-TB | lineage2.2.1 | None | ERR3639699 | MDR-TB | lineage2.2.1 | None | ERR2510599 | MDR-TB | lineage4.8 | None | SRR13423551 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370502 | MDR-TB | lineage2.2.1 | None | ERR2517010 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR2516841 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR2516824 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR2516424 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR2515640 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR5710013 | Pre-XDR-TB | lineage4.4.2 | th | SRR18665458 | MDR-TB | lineage4.1.1.3 | None | SRR20632798 | MDR-TB | lineage2.2.1 | None | ERR12118056 | Pre-XDR-TB | lineage4.3.3 | None | ERR5866238 | MDR-TB | lineage2.2.1 | None | DRR130200 | Pre-XDR-TB | lineage4 | None | ERR5866586 | HR-TB | lineage2.2.1 | None | SAMN02419604 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419582 | MDR-TB | lineage2.2.1 | by | SAMN02419641 | MDR-TB | lineage2.2.1 | by | SRR16088543 | XDR-TB | lineage2.2.1 | None | SRR28393312 | Pre-XDR-TB | lineage2.2.1 | None | SRR13449605 | HR-TB | lineage4.3.3 | None | SRR6831806 | MDR-TB | lineage2.2.1 | None | SRR924716 | MDR-TB | lineage2.2.1 | None | ERR7911133 | MDR-TB | lineage2.2.1 | None | ERR11488780 | MDR-TB | lineage4.4.1.1 | None | SRR26937068 | MDR-TB | lineage2.2.1 | None | ERR13191364 | MDR-TB | lineage2.2.1 | None | ERR13284081 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034581 | Pre-XDR-TB | lineage3.1.2 | pk | SRR15316388 | MDR-TB | lineage2.2.1 | None | ERR11488641 | MDR-TB | lineage4.4.1.1 | None | ERR9993075 | XDR-TB | lineage2.2.1 | None | ERR9993245 | MDR-TB | lineage2.2.1 | None | SRR1181157 | MDR-TB | lineage2.2.1 | None | ERR3273194 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR1103591 | MDR-TB | lineage4.1 | None | ERR8773892 | MDR-TB | lineage4.3 | None | ERR5865123 | MDR-TB | lineage4.3.3 | None | ERR5865722 | MDR-TB | lineage2.2.1 | None | ERR5865640 | MDR-TB | lineage4.3.3 | None | SRR28046042 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516239 | MDR-TB | lineage2.2.1 | be | ERR9993100 | XDR-TB | lineage3 | None | SRR14801498 | MDR-TB | lineage4.3.3 | None | ERR5917688 | MDR-TB | lineage2.2.1 | by | SRR10040170 | MDR-TB | lineage2.2.1 | None | SRR28045640 | Pre-XDR-TB | lineage2.2.1 | None | SRR28046043 | Pre-XDR-TB | lineage2.2.1 | None | ERR12916915 | XDR-TB | lineage4.3.3 | None | ERR1034663 | MDR-TB | lineage4.8 | bg | ERR9807036 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR5864995 | MDR-TB | lineage2.2.1 | None | ERR1034586 | Pre-XDR-TB | lineage3.1.2 | pk | SRR24255900 | MDR-TB | lineage2.2.1 | None | SRR1181151 | MDR-TB | lineage2.2.1 | None | ERR13266817 | Pre-XDR-TB | lineage3.1 | None | SRR29772575 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13285004 | MDR-TB | lineage4.1.2.1 | None | ERR13266846 | Pre-XDR-TB | lineage3 | None | SRR29093367 | MDR-TB | lineage4.5 | None | SRR29051259 | MDR-TB | lineage4.3.3 | None | ERR2307499 | MDR-TB | lineage2.2.1 | None | SRR28046100 | Pre-XDR-TB | lineage2.2.1 | None | ERR12916913 | XDR-TB | lineage4.3.3 | None | SRR13355777 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827629 | Pre-XDR-TB | lineage1.1.3.3;lineage2.2.1;lineage3 | None | SRR22424813 | Pre-XDR-TB | lineage3.1.2 | None | ERR688026 | MDR-TB | lineage3 | None | ERR4829943 | MDR-TB | lineage3 | pk | ERR7737713 | MDR-TB | lineage2.2.1 | None | ERR4830284 | HR-TB | lineage2.2.1 | vn | ERR11081547 | MDR-TB | lineage4.1.2.1 | None | ERR8665551 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162481 | MDR-TB | lineage4.1 | None | ERR7737760 | MDR-TB | lineage2.2.1.1 | None | ERR2307778 | MDR-TB | lineage2.2.1 | None | SRR21887688 | MDR-TB | lineage2.2.1 | None | SRR28351370 | MDR-TB | lineage4.3.3 | None | ERR4872186 | MDR-TB | lineage4.6.2.2 | None | ERR4553754 | MDR-TB | lineage1.2.2.2 | None | ERR5864989 | Pre-XDR-TB | lineage2.2.1 | None | ERR1352352 | XDR-TB | lineage2.2.1 | cn | SRR10380020 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049622 | MDR-TB | lineage4.4.1.1 | None | SRR18715276 | Pre-XDR-TB | lineage4.3.3 | None | ERR13261241 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR11662329 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255887 | MDR-TB | lineage2.2.1 | None | ERR13261989 | MDR-TB | lineage2.2.1 | None | SRR25827458 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR8025595 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR28394304 | MDR-TB | lineage4.1.2.1 | None | SRR29772465 | Pre-XDR-TB | lineage1.1.2 | None | SRR13232488 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800099 | MDR-TB | lineage3 | None | SRR29231794 | MDR-TB | lineage4.3.3 | None | ERR5865853 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307518 | MDR-TB | lineage2.2.1 | None | SRR29539268 | MDR-TB | lineage2.2.1 | None | SRR29539765 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276874 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969468 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02381009 | MDR-TB | lineage4.4.1.1 | None | SRR1184039 | MDR-TB | lineage2.2.1 | None | SRR15368758 | MDR-TB | lineage2.2.1 | None | ERR8665691 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539062 | Pre-XDR-TB | lineage2.2.1 | None | ERR11080938 | MDR-TB | lineage4.1.2.1 | None | SRR29017614 | Pre-XDR-TB | lineage4.8 | None | SRR25827621 | MDR-TB | lineage1.1.3.3 | None | ERR13260026 | MDR-TB | lineage2.2.1 | None | SRR26399937 | HR-TB | lineage2.2.1 | None | SAMN02381012 | MDR-TB | lineage4.4.1.1 | None | ERR8665839 | MDR-TB | lineage2.2.1 | None | SRR25827616 | Pre-XDR-TB | lineage3 | None | ERR13290595 | MDR-TB | lineage2.2.1 | None | SRR25827407 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR13232737 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864993 | MDR-TB | lineage2.2.1 | None | SRR9028488 | MDR-TB | lineage3 | None | SRR30182645 | MDR-TB | lineage2.2.1 | None | SRR23310868 | XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR11638839 | XDR-TB | lineage3 | None | SRR15368955 | MDR-TB | lineage2.2.1 | None | SRR11567813 | Pre-XDR-TB | lineage2.2.2 | None | ERR6662372 | MDR-TB | lineage2.2.1 | None | SRR5341251 | MDR-TB | lineage2.2.1 | None | ERR688032 | Pre-XDR-TB | lineage3 | None | SRR25534517 | Pre-XDR-TB | lineage2.2.1 | None | SRR6485099 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119584 | MDR-TB | lineage4.6.2.2 | None | ERR13261379 | Pre-XDR-TB | lineage3.1.2.1 | None | SRR22757398 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040470 | Pre-XDR-TB | lineage2.2.1 | None | ERR11811359 | MDR-TB | lineage2.2.1 | None | SRR7517738 | MDR-TB | lineage2.2.1 | None | ERR9993026 | XDR-TB | lineage3 | None | SRR1159338 | MDR-TB | lineage2.2.1 | None | ERR16022266 | Pre-XDR-TB | lineage3 | None | SRR1166916 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510300 | MDR-TB | lineage3 | pk | ERR2510389 | Pre-XDR-TB | lineage3 | pk | ERR3335754 | MDR-TB | lineage3 | pk | ERR13276218 | XDR-TB | lineage2.2.1 | None | ERR2510358 | MDR-TB | lineage2.2.1 | pk | ERR1352350 | XDR-TB | lineage2.2.1 | cn | ERR7737715 | MDR-TB | lineage2.2.1.1 | None | ERR4799592 | Pre-XDR-TB | lineage3 | in | SRR20969478 | MDR-TB | lineage2.2.1 | None | ERR4796703 | MDR-TB | lineage4.8 | in | SRR6257108 | MDR-TB | lineage2.2.1 | None | SRR6511607 | MDR-TB | lineage4.3.4.1 | None | SRR25207165 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02231166 | MDR-TB | lineage4.1 | ml | SRR1169063 | Pre-XDR-TB | lineage2.2.1 | None | SRR23861991 | MDR-TB | lineage4.3.3 | None | SRR28394262 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR27069377 | MDR-TB | lineage2.2.1 | None | SRR10040200 | MDR-TB | lineage2.2.1 | None | ERR1034600 | Pre-XDR-TB | lineage3 | pk | ERR8665993 | MDR-TB | lineage2.2.1 | None | ERR4831464 | Pre-XDR-TB | lineage1.1.2 | None | ERR2307416 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516985 | MDR-TB | lineage2.2.1.1;lineage4.6.2.2 | gb | ERR1034845 | MDR-TB | lineage4.3.4.2 | pt | ERR2307452 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159369 | MDR-TB | lineage2.2.1 | None | ERR1352351 | XDR-TB | lineage2.2.1 | cn | ERR1352355 | XDR-TB | lineage2.2.1 | cn | ERR1352357 | XDR-TB | lineage2.2.1 | cn | ERR1034602 | Pre-XDR-TB | lineage3.1.2 | pk | ERR038754 | MDR-TB | lineage4.4.1.1 | ug | SRR6256978 | MDR-TB | lineage2.2.2 | ru | SRR20969472 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762255 | Pre-XDR-TB | lineage4.2.1 | None | ERR13284541 | RR-TB | lineage4.8 | None | SRR23691407 | MDR-TB | lineage2.2.1 | None | SRR29772435 | MDR-TB | lineage1.2.2.2 | None | SRR29681247 | MDR-TB | lineage2.2.1 | None | SRR1158890 | MDR-TB | lineage2.2.1 | None | SRR1172345 | MDR-TB | lineage2.2.1 | None | SRR20969362 | MDR-TB | lineage2.2.1 | None | SRR10397193 | MDR-TB | lineage4.3.3 | None | ERR12916927 | XDR-TB | lineage4.3.3 | None | ERR4799551 | Pre-XDR-TB | lineage3.1 | None | SRR1062897 | MDR-TB | lineage4.4.1.1 | None | ERR1034653 | MDR-TB | lineage4.8 | bg | SRR21277250 | MDR-TB | lineage2.2.1 | None | SRR9613542 | MDR-TB | lineage4.1.2 | None | SRR28351162 | MDR-TB | lineage2.2.1 | None | SRR5535857 | MDR-TB | lineage4.6.1.2 | None | ERR2307592 | MDR-TB | lineage2.2.1 | None | SRR1163031 | MDR-TB | lineage2.2.1 | None | ERR7737775 | MDR-TB | lineage2.2.1 | None | ERR5917692 | MDR-TB | lineage2.2.1 | by | ERR8665633 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159204 | MDR-TB | lineage2.2.1 | None | ERR9993114 | XDR-TB | lineage4.1.1.3 | None | ERR4553637 | Pre-XDR-TB | lineage4.9 | None | SRR5153257 | MDR-TB | lineage4.2.1.1 | None | ERR11488613 | MDR-TB | lineage4.4.1.1 | None | ERR5864992 | MDR-TB | lineage2.2.1 | None | SRR6485055 | HR-TB | lineage4.8 | None | SRR1162504 | MDR-TB | lineage2.2.1 | None | SRR1181125 | MDR-TB | lineage2.2.1 | None | ERR11044180 | XDR-TB | lineage2.2.1 | None | ERR2307555 | MDR-TB | lineage2.2.1 | None | ERR13276210 | Pre-XDR-TB | lineage2.2.1 | None | ERR688018 | Pre-XDR-TB | lineage3.1.2 | None | SRR11828962 | MDR-TB | lineage2.1 | None | SRR22251917 | MDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR8774578 | MDR-TB | lineage2.2.1 | None | SRR27069389 | MDR-TB | lineage4.4.2 | None | SRR29539652 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864368 | MDR-TB | lineage2.2.1 | None | SRR30182762 | MDR-TB | lineage2.2.1 | None | SRR6458436 | Pre-XDR-TB | lineage4.3.3 | None | SRR9224918 | MDR-TB | lineage4.3.3 | None | ERR11083032 | RR-TB | lineage4.8 | None | ERR5866240 | MDR-TB | lineage2.2.1 | None | SRR6458396 | Pre-XDR-TB | lineage4.3.3 | None | SRR29539355 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865854 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
