Rv2043c - c.390_391dupGG
Drug resistance types
0 Sensitive
1 RR-TB
2 HR-TB
56 MDR-TB
63 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 3 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1 | 51 |
| lineage4.8 | 12 |
| lineage4.2.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage3 | 15 |
| lineage2.2.1.1 | 8 |
| lineage4.3.3 | 8 |
| lineage4.1 | 1 |
| lineage4.8;lineage4.1.2.1 | 1 |
| lineage3.1 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.4.2 | 2 |
| lineage3.1.2 | 4 |
| lineage4.9 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.6.2.2;lineage2.2.1.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage2.2.2 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 122 |
Geographic prevalence
Country level data for this variant is available for 104 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02381012 | MDR-TB | lineage4.4.1.1 | None | ERR3148190 | MDR-TB | lineage4.1.2.1 | mx | ERR4811536 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4831244 | Pre-XDR-TB | lineage2.2.1 | de | ERR4797868 | Pre-XDR-TB | lineage4.8 | in | ERR7911518 | MDR-TB | lineage2.2.1 | vn | ERR7911107 | MDR-TB | lineage2.2.1 | vn | ERR2864220 | MDR-TB | lineage4.2.1 | pt | ERR7911536 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2510300 | MDR-TB | lineage3 | pk | ERR1034600 | Pre-XDR-TB | lineage3 | pk | SRR23691407 | MDR-TB | lineage2.2.1 | None | ERR2516824 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR4831508 | Pre-XDR-TB | lineage3 | pk | ERR3014590 | Pre-XDR-TB | lineage4.8 | None | SRR2100131 | MDR-TB | lineage4.8 | None | ERR2510472 | MDR-TB | lineage3 | pk | ERR4830284 | HR-TB | lineage2.2.1 | vn | ERR1034653 | MDR-TB | lineage4.8 | bg | ERR3335754 | MDR-TB | lineage3 | pk | ERR1352355 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2516841 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR7911077 | MDR-TB | lineage4.3.3 | md | SAMN02419582 | MDR-TB | lineage2.2.1 | by | ERR4797893 | MDR-TB | lineage4.3.3 | in | ERR1034594 | MDR-TB | lineage3 | pk | SAMN02381009 | MDR-TB | lineage4.4.1.1 | None | SAMN02231166 | MDR-TB | lineage4.1 | ml | ERR1352353 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4796703 | MDR-TB | lineage4.8 | in | SRR5341329 | Pre-XDR-TB | lineage4.8 | in | ERR4799010 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798124 | Pre-XDR-TB | lineage2.2.1 | in | ERR2707146 | MDR-TB | lineage4.3.3 | cd | ERR4829916 | MDR-TB | lineage4.8;lineage4.1.2.1 | it | ERR4800201 | Pre-XDR-TB | lineage3.1 | in | ERR2510445 | Pre-XDR-TB | lineage3 | pk | ERR4796706 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799898 | Pre-XDR-TB | lineage1.2.2.2 | in | SAMN02419641 | MDR-TB | lineage2.2.1 | by | ERR4822608 | Pre-XDR-TB | lineage2.2.1 | de | ERR7911108 | MDR-TB | lineage2.2.1 | vn | SRR5710013 | Pre-XDR-TB | lineage4.4.2 | th | ERR229936 | MDR-TB | lineage2.2.1 | ru | ERR1034663 | MDR-TB | lineage4.8 | bg | ERR8665907 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800326 | MDR-TB | lineage2.2.1 | in | ERR4822603 | Pre-XDR-TB | lineage2.2.1 | de | SRR5341273 | MDR-TB | lineage1.2.2.2 | in | ERR2510358 | MDR-TB | lineage2.2.1 | pk | ERR1352352 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2706972 | MDR-TB | lineage4.3.3 | cd | ERR234649 | MDR-TB | lineage2.2.1 | ru | ERR067586 | HR-TB | lineage2.2.1 | ru | ERR4831641 | MDR-TB | lineage2.2.1 | vn | ERR4798417 | MDR-TB | lineage2.2.1 | in | ERR1352358 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2510423 | Pre-XDR-TB | lineage3 | pk | SAMN02419550 | MDR-TB | lineage2.2.1 | by | ERR4800084 | Pre-XDR-TB | lineage3.1.2 | in | ERR4797763 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR2510476 | RR-TB | lineage3 | pk | ERR4797035 | Pre-XDR-TB | lineage4.8 | in | ERR4796732 | Pre-XDR-TB | lineage4.9 | in | ERR4831250 | Pre-XDR-TB | lineage2.2.1 | de | ERR1035337 | MDR-TB | lineage4.1.2.1 | br | ERR4796913 | Pre-XDR-TB | lineage4.1.1.3 | in | ERR8665610 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02414968 | MDR-TB | lineage2.2.1 | se | ERR4831465 | Pre-XDR-TB | lineage4.8 | None | ERR4830401 | MDR-TB | lineage2.2.1.1 | vn | ERR8665906 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665822 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166297 | MDR-TB | lineage4.8 | ro | ERR8665838 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510599 | MDR-TB | lineage4.8 | None | ERR4830970 | Pre-XDR-TB | lineage4.2.2.2 | np | ERR2516985 | MDR-TB | lineage4.6.2.2;lineage2.2.1.1 | gb | ERR4829943 | MDR-TB | lineage3 | pk | ERR144635 | MDR-TB | lineage2.2.1 | ru | ERR1034845 | MDR-TB | lineage4.3.4.2 | pt | SRR5341227 | Pre-XDR-TB | lineage4.3.3 | in | SRR5341251 | MDR-TB | lineage2.2.1 | None | ERR2515640 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1352356 | Pre-XDR-TB | lineage2.2.1 | cn | ERR7911512 | Pre-XDR-TB | lineage2.2.1 | vn | ERR2864246 | MDR-TB | lineage4.3.4.1 | pt | ERR4831471 | Pre-XDR-TB | lineage4.8 | pk | ERR2516424 | Pre-XDR-TB | lineage4.3.4.2 | pe | SAMN02419604 | Pre-XDR-TB | lineage2.2.1 | by | ERR4799592 | Pre-XDR-TB | lineage3 | in | ERR1034586 | Pre-XDR-TB | lineage3.1.2 | pk | ERR1034602 | Pre-XDR-TB | lineage3.1.2 | pk | ERR038754 | MDR-TB | lineage4.4.1.1 | ug | SRR6824357 | Pre-XDR-TB | lineage4.4.2 | None | ERR8665993 | MDR-TB | lineage2.2.1 | None | ERR2707030 | MDR-TB | lineage4.3.3 | cd | ERR1352354 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4798635 | Pre-XDR-TB | lineage4.3.3 | in | ERR5917692 | MDR-TB | lineage2.2.1 | by | ERR4798573 | MDR-TB | lineage4.3.3 | in | SAMN02419545 | MDR-TB | lineage2.2.1 | by | ERR5917688 | MDR-TB | lineage2.2.1 | by | ERR1035169 | Pre-XDR-TB | lineage2.2.1 | sa | ERR4831613 | Pre-XDR-TB | lineage2.2.1.1 | vn | ERR7911335 | MDR-TB | lineage2.2.1 | us | ERR2517010 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR2510389 | Pre-XDR-TB | lineage3 | pk | SRR6256978 | MDR-TB | lineage2.2.2 | ru | ERR1352350 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2516239 | MDR-TB | lineage2.2.1 | be | ERR4831464 | Pre-XDR-TB | lineage1.1.2 | None | ERR2510466 | MDR-TB | lineage3 | pk | ERR1034581 | Pre-XDR-TB | lineage3.1.2 | pk | ERR1352351 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4799659 | MDR-TB | lineage2.2.1.1 | in | ERR4831439 | Pre-XDR-TB | lineage3 | None | ERR2510292 | Pre-XDR-TB | lineage3 | pk | ERR4810968 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1352357 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6257108 | MDR-TB | lineage2.2.1 | None | SRR671754 | Pre-XDR-TB | lineage2.2.1 | cn |
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