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SRA data
Rv2043c
- c.390_391dupGG
Drug resistance types
0 Sensitive
4 RR-TB
11 HR-TB
256 MDR-TB
187 Pre-XDR-TB
29 XDR-TB
3 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
241
lineage4.3.3
43
lineage3
41
lineage4.8
20
lineage4.4.1.1
14
lineage2.2.1.1
13
lineage4.1.2.1
10
lineage3.1.2
10
lineage4.1.1.3
9
lineage4.9
8
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
490
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR130199
Pre-XDR-TB
lineage2.2.1
None
DRR130200
Pre-XDR-TB
lineage4
None
ERR038754
MDR-TB
lineage4.4.1.1
ug
ERR067586
HR-TB
lineage2.2.1
ru
ERR072082
MDR-TB
lineage4.8
None
ERR1034581
Pre-XDR-TB
lineage3.1.2
pk
ERR1034586
Pre-XDR-TB
lineage3.1.2
pk
ERR1034594
MDR-TB
lineage3
pk
ERR1034600
Pre-XDR-TB
lineage3
pk
ERR1034602
Pre-XDR-TB
lineage3.1.2
pk
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