lineage | Count |
---|---|
lineage4.2.1 | 4 |
lineage2.2.1 | 6 |
lineage3 | 9 |
lineage4.1.3 | 1 |
lineage4 | 7 |
lineage4.2.2 | 2 |
lineage1.1.2 | 4 |
lineage4.3.3 | 1 |
lineage4.3.4.1 | 1 |
lineage2.2.2 | 1 |
lineage4.9 | 2 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 39 |
ID | Drug resistance | Lineage | Country iso2 | SAMN02584616 | Pre-XDR-TB | lineage4.2.1 | md | SRR1723675_SRR1723674 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510457 | Pre-XDR-TB | lineage3 | None | ERR2679269 | MDR-TB | lineage4.1.3 | None | SAMN02360567 | HR-TB | lineage4 | kr | ERR4798568 | Pre-XDR-TB | lineage4.2.2 | in | ERR2510557 | Pre-XDR-TB | lineage1.1.2 | pk | ERR4811562 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4829007 | Pre-XDR-TB | lineage2.2.1 | it | ERR4800090 | Pre-XDR-TB | lineage4.2.2 | in | ERR3287467 | Pre-XDR-TB | lineage4.3.3 | pe | ERR2510553 | Pre-XDR-TB | lineage1.1.2 | pk | SRR1013609 | HR-TB | lineage4 | None | ERR2510554 | Pre-XDR-TB | lineage1.1.2 | pk | ERR9907756 | MDR-TB | lineage4.3.4.1 | None | SRR1013575 | HR-TB | lineage4 | None | SRR1013576 | HR-TB | lineage4 | None | ERR9992981 | XDR-TB | lineage2.2.2 | None | SRR1048882 | HR-TB | lineage4 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048881 | HR-TB | lineage4 | None | SRR1169018 | Pre-XDR-TB | lineage4.2.1 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1166146 | Pre-XDR-TB | lineage4.2.1 | None | SRR15276981 | Pre-XDR-TB | lineage3 | None | SRR15276984 | Pre-XDR-TB | lineage3 | None | SRR15276983 | Pre-XDR-TB | lineage3 | None | SRR15276985 | Pre-XDR-TB | lineage3 | None | SRR15276982 | Pre-XDR-TB | lineage3 | None | SRR15276987 | Pre-XDR-TB | lineage3 | None | SRR15276986 | Pre-XDR-TB | lineage3 | None | ERR11082353 | Pre-XDR-TB | lineage4.2.1 | None | SRR20139557 | MDR-TB | lineage4.8 | None | SRR3105776 | Pre-XDR-TB | lineage1.1.2 | None | SRR25206877 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207057 | MDR-TB | lineage2.2.1 | None | SRR5341321 | Pre-XDR-TB | lineage3 | in | SRR6824370 | Pre-XDR-TB | lineage2.2.1 | cn |
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