| lineage | Count |
|---|---|
| lineage4.1.1.3 | 13 |
| lineage2.2.1 | 56 |
| lineage1.2.2.2 | 2 |
| lineage4.3.3 | 21 |
| lineage4.8 | 17 |
| lineage2.2.1.1 | 10 |
| lineage4.1.2.1 | 2 |
| lineage1.1.2 | 3 |
| lineage4.3.4.2.1 | 8 |
| lineage2.2.1;lineage4.3.3 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.2.1 | 1 |
| lineage3 | 3 |
| lineage4.3.4.2 | 4 |
| lineage2.2.1.1;lineage4.8 | 1 |
| lineage4.4.2 | 1 |
| lineage2.2.1;lineage4.8 | 2 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | 2 |
| lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage6.1.1 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3;lineage4 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.2.1;lineage4.3.3 | 1 |
| lineage4.3 | 1 |
| spoligotype | Count |
|---|---|
| None | 156 |
| ID | Drug resistance | Lineage | Country iso2 | ERR7911375 | MDR-TB | lineage4.1.1.3 | pe | ERR7911174 | Pre-XDR-TB | lineage2.2.1 | vn | ERR4553781 | MDR-TB | lineage1.2.2.2 | None | ERR5864546 | MDR-TB | lineage2.2.1 | None | ERR5865226 | MDR-TB | lineage2.2.1 | None | ERR3794473 | MDR-TB | lineage2.2.1 | None | SRR16168839 | XDR-TB | lineage2.2.1 | None | ERR10867788 | MDR-TB | lineage4.3.3 | None | ERR5864547 | MDR-TB | lineage2.2.1 | None | SRR25827799 | XDR-TB | lineage4.8 | None | SRR28351576 | MDR-TB | lineage4.8 | None | ERR4797669 | Pre-XDR-TB | lineage4.8 | in | ERR4799754 | Pre-XDR-TB | lineage4.8 | in | SRR1163078 | MDR-TB | lineage2.2.1 | None | ERR4797301 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR23691350 | MDR-TB | lineage2.2.1 | None | SRR5153595 | MDR-TB | lineage2.2.1 | None | SRR24710169 | MDR-TB | lineage2.2.1 | None | ERR5864548 | MDR-TB | lineage2.2.1 | None | ERR11043721 | MDR-TB | lineage4.1.2.1 | None | ERR4827546 | Pre-XDR-TB | lineage2.2.1 | None | SRR26937122 | MDR-TB | lineage2.2.1 | None | ERR3794458 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864542 | MDR-TB | lineage2.2.1 | None | ERR7902773 | MDR-TB | lineage1.1.2 | None | ERR5865228 | MDR-TB | lineage2.2.1 | None | ERR13290513 | MDR-TB | lineage2.2.1 | None | SRR28858599 | Pre-XDR-TB | lineage2.2.1 | None | ERR10869501 | MDR-TB | lineage4.3.3 | None | SRR1049624 | MDR-TB | lineage4.3.4.2.1 | None | SAMN02381010 | MDR-TB | lineage4.3.4.2.1 | None | ERR13285041 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR24256134 | MDR-TB | lineage2.2.1 | None | ERR13285873 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743368 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR13266840 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16087940 | MDR-TB | lineage4.2.1 | None | ERR13284462 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510476 | RR-TB | lineage3 | pk | SRR29230772 | MDR-TB | lineage4.3.4.2 | None | SRR27069422 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800290 | XDR-TB | lineage2.2.1.1;lineage4.8 | in | ERR4798833 | Pre-XDR-TB | lineage4.8 | in | ERR10869436 | MDR-TB | lineage4.3.3 | None | SRR10040497 | MDR-TB | lineage4.4.2 | None | SRR12420471 | MDR-TB | lineage2.2.1 | None | ERR4796946 | MDR-TB | lineage4.8 | in | SRR1049625 | MDR-TB | lineage4.3.4.2.1 | None | ERR4800367 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | in | SRR29017238 | MDR-TB | lineage1.2.2.2 | None | SRR25827402 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | None | SAMN02414936 | MDR-TB | lineage2.2.1 | se | ERR11068718 | MDR-TB | lineage4.3.3 | None | SRR11972336 | MDR-TB | lineage2.2.1 | None | ERR4813052 | MDR-TB | lineage4.1.1.3 | None | SRR2024926 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2706995 | MDR-TB | lineage4.3.4.2 | cd | ERR2707192 | MDR-TB | lineage4.3.4.2 | cd | SRR25827874 | MDR-TB | lineage4.8 | None | SRR11972286 | MDR-TB | lineage2.2.1 | None | ERR038744 | MDR-TB | lineage4.3.4.2.1 | ug | ERR4819327 | MDR-TB | lineage4.3.3 | gb | SRR26937078 | HR-TB | lineage2.2.1 | None | SRR25827648 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29539622 | Pre-XDR-TB | lineage2.2.1 | None | SRR30182407 | MDR-TB | lineage4.1.1.3 | None | ERR7975634 | Pre-XDR-TB | lineage4.3.3 | None | SRR3105753 | MDR-TB | lineage3 | None | SRR1163478 | MDR-TB | lineage2.2.1 | None | SRR16370636 | Pre-XDR-TB | lineage2.2.1 | None | ERR10877893 | MDR-TB | lineage4.3.3 | None | ERR4797902 | XDR-TB | lineage2.2.1.1 | in | ERR4799245 | XDR-TB | lineage2.2.1.1 | in | ERR5864550 | MDR-TB | lineage2.2.1 | None | ERR4800353 | XDR-TB | lineage2.2.1.1 | in | ERR4796864 | Pre-XDR-TB | lineage4.8 | in | ERR4817820 | MDR-TB | lineage4.3.3 | gb | ERR4821059 | MDR-TB | lineage4.3.3 | gb | ERR10869439 | MDR-TB | lineage4.3.3 | None | ERR10867701 | MDR-TB | lineage4.3.3 | None | ERR4799475 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1146290 | MDR-TB | lineage2.2.1 | None | ERR5864543 | MDR-TB | lineage2.2.1 | None | ERR13290510 | MDR-TB | lineage2.2.1 | None | SRR12420737 | MDR-TB | lineage2.2.1 | None | ERR5864545 | MDR-TB | lineage2.2.1 | None | ERR11068745 | MDR-TB | lineage4.3.3 | None | SRR26159038 | MDR-TB | lineage4.9 | None | ERR5864544 | MDR-TB | lineage2.2.1 | None | DRR130186 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291084 | MDR-TB | lineage4.5 | None | SRR12420647 | MDR-TB | lineage2.2.1 | None | ERR13267126 | Pre-XDR-TB | lineage4.8 | None | SRR25827780 | XDR-TB | lineage2.2.1;lineage4.8 | None | SRR28393381 | MDR-TB | lineage4.1.1.3 | None | SRR7069386 | MDR-TB | lineage4.3.3 | None | SRR7068911 | MDR-TB | lineage4.3.3 | None | SRR17406769 | Pre-XDR-TB | lineage4.8 | None | SRR7898217 | MDR-TB | lineage1.1.2 | None | SRR29539016 | HR-TB | lineage2.2.1 | None | SRR25827610 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13261476 | MDR-TB | lineage4.8 | None | ERR4797483 | Pre-XDR-TB | lineage4.8 | in | SRR1144762 | MDR-TB | lineage2.2.1 | None | ERR4799867 | Pre-XDR-TB | lineage4.8 | in | SRR8651663 | Pre-XDR-TB | lineage2.2.1 | cn | ERR439972 | MDR-TB | lineage6.1.1 | None | SRR27069448 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25827427 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1;lineage3;lineage4 | None | ERR4813453 | MDR-TB | lineage4.1.1.3 | pe | SRR28498714 | Pre-XDR-TB | lineage2.2.1 | None | SRR22461702 | MDR-TB | lineage4.1.1.3 | None | ERR1023415 | MDR-TB | lineage2.2.1 | None | ERR7910867 | MDR-TB | lineage4.1.1.3 | pe | ERR4813459 | MDR-TB | lineage4.1.1.3 | pe | ERR4831461 | MDR-TB | lineage3 | None | SRR28046126 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2516905 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR2516715 | MDR-TB | lineage4.2.2.1 | nl | ERR10869162 | MDR-TB | lineage4.3.3 | None | SRR16088199 | MDR-TB | lineage2.2.1 | None | ERR13266943 | Pre-XDR-TB | lineage4.8 | None | ERR987706 | MDR-TB | lineage4.3.4.2.1 | None | ERR5865227 | MDR-TB | lineage2.2.1 | None | ERR9286064 | MDR-TB | lineage1.1.2 | None | SRR5217439 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11662472 | MDR-TB | lineage2.2.1 | None | SRR7535045 | MDR-TB | lineage4.3.4.2.1 | None | SRR25827345 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | None | SRR1140750 | MDR-TB | lineage4.3.4.2.1 | None | ERR4800625 | Pre-XDR-TB | lineage4.8 | None | SRR24256172 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762328 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832026 | MDR-TB | lineage2.2.1 | None | ERR2517075 | MDR-TB | lineage4.3.3 | gb | SRR28045706 | Pre-XDR-TB | lineage4.8 | None | SRR6797542 | MDR-TB | lineage2.2.1 | None | ERR7911344 | MDR-TB | lineage4.1.1.3 | pe | ERR10877888 | MDR-TB | lineage4.3.3 | None | ERR10877882 | MDR-TB | lineage4.2.1;lineage4.3.3 | None | ERR13290511 | MDR-TB | lineage2.2.1 | None | ERR13284935 | MDR-TB | lineage4.1.2.1 | None | ERR5864549 | MDR-TB | lineage2.2.1 | None | SRR7069510 | MDR-TB | lineage4.3.3 | None | SRR6832418 | MDR-TB | lineage2.2.1 | None | ERR10877870 | Pre-XDR-TB | lineage4.3.3 | None | SRR16088124 | MDR-TB | lineage2.2.1 | None | SRR25827315 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11081123 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR1062898 | MDR-TB | lineage4.3.4.2.1 | None | ERR1034672 | MDR-TB | lineage4.3 | co | ERR4799182 | Pre-XDR-TB | lineage4.8 | in | ERR4799431 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR29230995 | MDR-TB | lineage4.3.4.2 | None | ERR2514503 | MDR-TB | lineage4.3.3 | None | ERR10877887 | Pre-XDR-TB | lineage4.3.3 | None |
|---|