lineage | Count |
---|---|
lineage4 | 6 |
lineage2.2.1 | 76 |
lineage2.2.1;lineage4.3.3 | 1 |
lineage4.8 | 5 |
lineage4.2.1 | 2 |
lineage4.1.2 | 1 |
lineage4.9 | 1 |
lineage4.3.4.1 | 1 |
lineage1.1.2 | 1 |
lineage4.2.1.1 | 1 |
lineage4.1.1 | 1 |
lineage3.1.2.1 | 1 |
lineage2.2.1;lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 98 |
ID | Drug resistance | Lineage | Country iso2 | SRR28393317 | MDR-TB | lineage4 | None | SRR18714848 | MDR-TB | lineage2.2.1 | None | ERR4872343 | Pre-XDR-TB | lineage2.2.1 | None | SRR7652970 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153617 | Pre-XDR-TB | lineage2.2.1 | None | SRR7653080 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR5153086 | Pre-XDR-TB | lineage2.2.1 | None | SRR10397225 | Pre-XDR-TB | lineage2.2.1 | None | ERR108477 | MDR-TB | lineage2.2.1 | ru | SRR27107291 | MDR-TB | lineage4.8 | None | SRR14782602 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380092 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287819 | MDR-TB | lineage4 | pe | ERR7911309 | MDR-TB | lineage2.2.1 | vn | ERR775389 | MDR-TB | lineage4 | pe | ERR845936 | MDR-TB | lineage4 | pe | ERR4828917 | MDR-TB | lineage2.2.1 | None | ERR11068477 | MDR-TB | lineage2.2.1 | None | ERR4818594 | MDR-TB | lineage2.2.1 | gb | ERR11067750 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802067 | MDR-TB | lineage2.2.1 | None | ERR3287493 | Pre-XDR-TB | lineage2.2.1 | pe | ERR11798580 | MDR-TB | lineage2.2.1 | None | SRR27107266 | MDR-TB | lineage4.8 | None | ERR11798582 | Pre-XDR-TB | lineage2.2.1 | None | ERR553238 | MDR-TB | lineage2.2.1 | de | SRR27107250 | MDR-TB | lineage4.8 | None | ERR117454 | Pre-XDR-TB | lineage2.2.1 | ru | SRR10379912 | Pre-XDR-TB | lineage4.2.1 | None | ERR9907673 | MDR-TB | lineage4.1.2 | None | SRR28351374 | XDR-TB | lineage2.2.1 | None | SRR28393789 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773839 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351399 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351499 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351620 | MDR-TB | lineage2.2.1 | None | SRR29681437 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645947 | MDR-TB | lineage2.2.1 | None | ERR4024807 | MDR-TB | lineage2.2.1 | None | ERR5865967 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801666 | MDR-TB | lineage2.2.1 | None | SRR14807523 | HR-TB | lineage4.2.1 | None | ERR7911744 | Pre-XDR-TB | lineage2.2.1 | us | ERR4872293 | XDR-TB | lineage2.2.1 | None | SRR8791297 | MDR-TB | lineage4.9 | None | SRR5153078 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798584 | MDR-TB | lineage2.2.1 | None | SRR6356952 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802065 | MDR-TB | lineage2.2.1 | None | ERR4872313 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911421 | Pre-XDR-TB | lineage2.2.1 | us | ERR11798583 | MDR-TB | lineage2.2.1 | None | SRR27107260 | MDR-TB | lineage4.8 | None | SRR7755755 | MDR-TB | lineage2.2.1 | None | SRR14782599 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034831 | MDR-TB | lineage4.3.4.1 | pt | ERR4872264 | XDR-TB | lineage2.2.1 | None | ERR4813173 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4810947 | Pre-XDR-TB | lineage2.2.1 | cn | SRR7781512 | MDR-TB | lineage2.2.1 | None | SRR28498708 | XDR-TB | lineage2.2.1 | None | SRR28498658 | MDR-TB | lineage2.2.1 | None | SRR28393420 | MDR-TB | lineage4 | None | SRR29772629 | MDR-TB | lineage1.1.2 | None | SRR14782333 | HR-TB | lineage2.2.1 | None | ERR5865852 | Pre-XDR-TB | lineage2.2.1 | None | SRR6356990 | Pre-XDR-TB | lineage2.2.1 | None | SRR12416826 | MDR-TB | lineage2.2.1 | None | SRR18715118 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR14802068 | MDR-TB | lineage2.2.1 | None | SRR6807751 | MDR-TB | lineage2.2.1 | None | ERR5865300 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911220 | MDR-TB | lineage2.2.1 | md | SRR7755721 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707214 | MDR-TB | lineage4.1.1 | cd | SRR14782420 | HR-TB | lineage2.2.1 | None | SRR25207372 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798581 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510862 | MDR-TB | lineage2.2.1 | it | ERR8774585 | Pre-XDR-TB | lineage2.2.1 | None | ERR108421 | MDR-TB | lineage2.2.1 | ru | SRR27107289 | MDR-TB | lineage4.8 | None | SRR24710033 | MDR-TB | lineage2.2.1 | None | ERR4799166 | MDR-TB | lineage3.1.2.1 | in | SRR10379973 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645888 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510171 | MDR-TB | lineage4 | pe | SRR14782601 | Pre-XDR-TB | lineage2.2.1 | None | SRR7516391 | Pre-XDR-TB | lineage2.2.1 | None | ERR552398 | MDR-TB | lineage2.2.1 | None | SRR6807750 | MDR-TB | lineage2.2.1 | None | ERR6865904 | MDR-TB | lineage2.2.1 | None | SRR23310877 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865301 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068214 | MDR-TB | lineage2.2.1 | None | ERR10762311 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR4828829 | MDR-TB | lineage2.2.1 | None | ERR5865851 | Pre-XDR-TB | lineage2.2.1 | None |
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