Rv2043c - p.Asp8Glu
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
3 HR-TB
51 MDR-TB
45 Pre-XDR-TB
4 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 1 |
| lineage2.2.1 | 79 |
| lineage4.2.1.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.1.1 | 2 |
| lineage4.8 | 5 |
| lineage1.1.2 | 1 |
| lineage2.2.1;lineage4.2.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4 | 6 |
| lineage4.1.2 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 103 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8791297 | MDR-TB | lineage4.9 | None | SRR12416826 | MDR-TB | lineage2.2.1 | None | ERR11068214 | MDR-TB | lineage2.2.1 | None | SRR18715118 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR14782602 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802068 | MDR-TB | lineage2.2.1 | None | ERR5865967 | Pre-XDR-TB | lineage2.2.1 | None | SRR10379912 | Pre-XDR-TB | lineage4.2.1 | None | ERR13260655 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207372 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872293 | XDR-TB | lineage2.2.1 | None | SRR28239686 | MDR-TB | lineage2.2.1 | None | SRR5153078 | Pre-XDR-TB | lineage2.2.1 | None | SRR6356952 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774585 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231822 | MDR-TB | lineage4.1.1 | None | SRR14782420 | HR-TB | lineage2.2.1 | None | SRR27107289 | MDR-TB | lineage4.8 | None | ERR11773839 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710033 | MDR-TB | lineage2.2.1 | None | SRR23310877 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153617 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782601 | Pre-XDR-TB | lineage2.2.1 | None | SRR7516391 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772629 | MDR-TB | lineage1.1.2 | None | ERR10762311 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR11798580 | MDR-TB | lineage2.2.1 | None | SRR29681437 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872264 | XDR-TB | lineage2.2.1 | None | ERR4872343 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799166 | MDR-TB | lineage3.1.2.1 | in | ERR11067750 | Pre-XDR-TB | lineage2.2.1 | None | SRR10397225 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393317 | MDR-TB | lineage4 | None | ERR13284429 | MDR-TB | lineage2.2.1 | None | ERR9907673 | MDR-TB | lineage4.1.2 | None | ERR5865851 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287819 | MDR-TB | lineage4 | pe | SRR28351374 | XDR-TB | lineage2.2.1 | None | SRR28498708 | XDR-TB | lineage2.2.1 | None | ERR3287493 | Pre-XDR-TB | lineage2.2.1 | pe | SRR28498658 | MDR-TB | lineage2.2.1 | None | ERR7911220 | MDR-TB | lineage2.2.1 | md | SRR28351499 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351620 | MDR-TB | lineage2.2.1 | None | ERR4828917 | MDR-TB | lineage2.2.1 | None | ERR7911309 | MDR-TB | lineage2.2.1 | vn | ERR4828829 | MDR-TB | lineage2.2.1 | None | ERR2707214 | MDR-TB | lineage4.1.1 | cd | ERR7911744 | Pre-XDR-TB | lineage2.2.1 | us | ERR775389 | MDR-TB | lineage4 | pe | SRR28351399 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380092 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798582 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802065 | MDR-TB | lineage2.2.1 | None | ERR553238 | MDR-TB | lineage2.2.1 | de | ERR117454 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4818594 | MDR-TB | lineage2.2.1 | gb | SRR27107260 | MDR-TB | lineage4.8 | None | SRR18714848 | MDR-TB | lineage2.2.1 | None | ERR5865852 | Pre-XDR-TB | lineage2.2.1 | None | SRR6807751 | MDR-TB | lineage2.2.1 | None | ERR2510862 | MDR-TB | lineage2.2.1 | it | SRR5153086 | Pre-XDR-TB | lineage2.2.1 | None | ERR6865904 | MDR-TB | lineage2.2.1 | None | SRR7653080 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR7755721 | Pre-XDR-TB | lineage2.2.1 | None | SRR7652970 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798583 | MDR-TB | lineage2.2.1 | None | ERR108421 | MDR-TB | lineage2.2.1 | ru | SRR7755755 | MDR-TB | lineage2.2.1 | None | SRR14782599 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645888 | Pre-XDR-TB | lineage2.2.1 | None | ERR552398 | MDR-TB | lineage2.2.1 | None | SRR27107266 | MDR-TB | lineage4.8 | None | SRR6807750 | MDR-TB | lineage2.2.1 | None | ERR108477 | MDR-TB | lineage2.2.1 | ru | ERR5865301 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801666 | MDR-TB | lineage2.2.1 | None | SRR27107250 | MDR-TB | lineage4.8 | None | SRR7781512 | MDR-TB | lineage2.2.1 | None | ERR13285851 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR14802067 | MDR-TB | lineage2.2.1 | None | SRR28393789 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393420 | MDR-TB | lineage4 | None | ERR4810947 | Pre-XDR-TB | lineage2.2.1 | cn | ERR7911421 | Pre-XDR-TB | lineage2.2.1 | us | ERR11798581 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813173 | Pre-XDR-TB | lineage2.2.1 | pe | ERR845936 | MDR-TB | lineage4 | pe | SRR27107291 | MDR-TB | lineage4.8 | None | ERR2510171 | MDR-TB | lineage4 | pe | ERR11068477 | MDR-TB | lineage2.2.1 | None | SRR7645947 | MDR-TB | lineage2.2.1 | None | ERR1034831 | MDR-TB | lineage4.3.4.1 | pt | SRR14807523 | HR-TB | lineage4.2.1 | None | SRR10379973 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872313 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865300 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798584 | MDR-TB | lineage2.2.1 | None | ERR4024807 | MDR-TB | lineage2.2.1 | None | SRR14782333 | HR-TB | lineage2.2.1 | None | SRR6356990 | Pre-XDR-TB | lineage2.2.1 | None |
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