Rv2043c - p.Asp8Gly
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
3 HR-TB
53 MDR-TB
57 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.4 | 2 |
| lineage2.2.1 | 101 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4.2 | 4 |
| lineage4.2.2.2 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 115 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29055722 | MDR-TB | lineage4.1.4 | None | ERR13281458 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818641 | MDR-TB | lineage2.2.1;lineage4 | dj | SRR23340153 | MDR-TB | lineage2.2.1 | None | ERR2677441 | Pre-XDR-TB | lineage2.2.1 | de | ERR1213926 | HR-TB | lineage4.1.2.1 | ma | ERR11044323 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081089 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255895 | MDR-TB | lineage2.2.1 | None | ERR2510798 | Pre-XDR-TB | lineage2.2.1 | it | ERR386881 | MDR-TB | lineage2.2.1 | None | ERR11043768 | MDR-TB | lineage2.2.1 | None | ERR11082872 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829894 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068882 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044470 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082474 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774331 | MDR-TB | lineage2.2.1 | None | SRR21674638 | MDR-TB | lineage4.1.4 | None | ERR4423499 | MDR-TB | lineage2.2.1 | None | ERR13290640 | MDR-TB | lineage2.2.1 | None | ERR13283983 | MDR-TB | lineage2.2.1 | None | ERR2307720 | MDR-TB | lineage2.2.1 | None | SRR29231792 | MDR-TB | lineage4.3.4.2 | None | ERR4828810 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276893 | Pre-XDR-TB | lineage2.2.1 | None | ERR278522 | MDR-TB | lineage2.2.1 | None | SRR8380894 | MDR-TB | lineage2.2.1 | in | SRR22048546 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082014 | MDR-TB | lineage2.2.1 | None | ERR13276340 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068878 | MDR-TB | lineage2.2.1 | None | ERR13276402 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082559 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284032 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284037 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068842 | Pre-XDR-TB | lineage2.2.1 | None | SRR28858581 | MDR-TB | lineage2.2.1 | None | ERR4797145 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR11082340 | Pre-XDR-TB | lineage2.2.1 | None | SRR17658005 | HR-TB | lineage4.1.2.1 | None | ERR13284027 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02414980 | MDR-TB | lineage2.2.1 | se | SRR671728 | RR-TB | lineage2.2.1 | cn | SRR16088348 | MDR-TB | lineage2.2.1 | None | ERR3132178 | HR-TB | lineage4.1.2.1 | None | ERR4822306 | Pre-XDR-TB | lineage2.2.1 | de | ERR2706989 | MDR-TB | lineage4.3.4.2 | cd | ERR2707209 | MDR-TB | lineage4.3.4.2 | cd | ERR4828795 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665805 | MDR-TB | lineage2.2.1 | None | SRR21576641 | MDR-TB | lineage4.5 | None | SRR22048485 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516875 | MDR-TB | lineage2.2.1 | gb | ERR2517005 | MDR-TB | lineage2.2.1 | gb | ERR2517015 | MDR-TB | lineage2.2.1 | gb | ERR2516605 | MDR-TB | lineage4.1.1.3 | pe | ERR2512979 | MDR-TB | lineage2.2.1 | gb | SRR25207046 | MDR-TB | lineage2.2.1 | None | ERR13276143 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276168 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043785 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162843 | MDR-TB | lineage2.2.1 | None | ERR11043262 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516213 | Pre-XDR-TB | lineage2.2.1 | be | ERR11068879 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284069 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082906 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276285 | Pre-XDR-TB | lineage2.2.1 | None | ERR13278946 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255894 | MDR-TB | lineage2.2.1 | None | ERR11082550 | Pre-XDR-TB | lineage2.2.1 | None | SRR29230992 | MDR-TB | lineage4.3.4.2 | None | ERR13276351 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276327 | MDR-TB | lineage2.2.1 | None | SRR7131187 | Pre-XDR-TB | lineage2.2.1 | None | ERR13281468 | MDR-TB | lineage2.2.1 | None | ERR11043559 | MDR-TB | lineage2.2.1 | None | ERR11068387 | MDR-TB | lineage2.2.1 | None | SRR23340075 | MDR-TB | lineage2.2.1 | None | ERR11043760 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165480 | MDR-TB | lineage2.2.1 | None | ERR13290639 | MDR-TB | lineage2.2.1 | None | ERR13281469 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082202 | Pre-XDR-TB | lineage2.2.1 | None | SRR23340028 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043600 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830881 | XDR-TB | lineage2.2.1 | None | ERR4423498 | MDR-TB | lineage2.2.1 | None | SRR3082082 | MDR-TB | lineage2.2.1;lineage4 | None | ERR2307701 | MDR-TB | lineage2.2.1 | None | ERR11082204 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380020 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131232 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830880 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715216 | MDR-TB | lineage2.2.1 | None | ERR387011 | MDR-TB | lineage2.2.1 | None | ERR13276399 | Pre-XDR-TB | lineage2.2.1 | None | ERR270630 | MDR-TB | lineage2.2.1 | None | SRR24256182 | MDR-TB | lineage2.2.1 | None | SRR1163032 | MDR-TB | lineage2.2.1 | None | ERR11043954 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290638 | MDR-TB | lineage2.2.1 | None | ERR13290641 | MDR-TB | lineage2.2.1 | None | ERR13276125 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774330 | MDR-TB | lineage2.2.1 | None | ERR4828789 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829050 | Pre-XDR-TB | lineage2.2.1 | it | ERR4828991 | Pre-XDR-TB | lineage2.2.1 | None | SRR30673599 | Pre-XDR-TB | lineage2.2.1 | None | SRR2100909 | MDR-TB | lineage2.2.1 | None | ERR2677386 | Pre-XDR-TB | lineage2.2.1 | de | ERR2677389 | Pre-XDR-TB | lineage2.2.1 | de | ERR4819358 | Pre-XDR-TB | lineage2.2.1 | gb | SRR1165595 | MDR-TB | lineage2.2.1 | None |
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