lineage | Count |
---|---|
lineage4.1.2.1 | 45 |
lineage4.1.1.3 | 30 |
lineage2.2.1 | 36 |
lineage4.6.2.2 | 2 |
lineage2.2.1;lineage3 | 1 |
lineage4.8 | 2 |
lineage4.9 | 3 |
lineage4.3.3 | 3 |
lineage4.2.2.2 | 1 |
lineage4.7 | 1 |
lineage3 | 3 |
lineage4.2.1;lineage4.3.3 | 1 |
spoligotype | Count |
---|---|
None | 128 |
ID | Drug resistance | Lineage | Country iso2 | SRR9224988 | MDR-TB | lineage4.1.2.1 | None | ERR551692 | Pre-XDR-TB | lineage4.1.1.3 | sz | ERR5864691 | MDR-TB | lineage2.2.1 | None | ERR8774390 | MDR-TB | lineage4.1.1.3 | None | SRR5153291 | MDR-TB | lineage2.2.1 | None | SRR9224956 | MDR-TB | lineage4.1.2.1 | None | ERR11488473 | MDR-TB | lineage4.1.1.3 | None | SRR29050677 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11043030 | MDR-TB | lineage2.2.1 | None | SRR16087919 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832675 | MDR-TB | lineage2.2.1 | None | SRR16088328 | XDR-TB | lineage2.2.1 | None | SRR29050898 | MDR-TB | lineage4.1.2.1 | None | SRR29050893 | MDR-TB | lineage4.1.2.1 | None | SRR6856071 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29051372 | MDR-TB | lineage4.1.2.1 | None | ERR11083163 | MDR-TB | lineage4.1.2.1 | None | ERR4872154 | Pre-XDR-TB | lineage4.6.2.2 | None | SRR29051053 | MDR-TB | lineage4.1.2.1 | None | SRR25515174 | MDR-TB | lineage2.2.1 | None | ERR4831253 | XDR-TB | lineage2.2.1 | de | SRR29051247 | MDR-TB | lineage4.1.2.1 | None | SRR13583349 | MDR-TB | lineage4.1.2.1 | None | ERR13191364 | MDR-TB | lineage2.2.1 | None | ERR11488343 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR25827376 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR11488730 | MDR-TB | lineage4.1.1.3 | None | ERR11465094 | MDR-TB | lineage4.1.1.3 | None | ERR4553673 | MDR-TB | lineage4.8 | None | SRR13583375 | MDR-TB | lineage4.1.2.1 | None | SRR29050683 | MDR-TB | lineage4.1.2.1 | None | SRR18665484 | MDR-TB | lineage4.1.2.1 | None | ERR4276886 | XDR-TB | lineage2.2.1 | None | ERR11488345 | MDR-TB | lineage4.1.1.3 | None | SRR5153255 | MDR-TB | lineage2.2.1 | None | SRR8589330 | Other | lineage4.9 | None | ERR4799788 | MDR-TB | lineage2.2.1 | None | ERR4423709 | MDR-TB | lineage4.1.1.3 | None | SRR13583521 | MDR-TB | lineage4.1.2.1 | None | ERR4812973 | Pre-XDR-TB | lineage4.3.3 | pe | ERR2145520 | MDR-TB | lineage4.2.2.2 | None | ERR11488605 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR13583508 | MDR-TB | lineage4.1.2.1 | None | ERR4813849 | Pre-XDR-TB | lineage4.7 | None | ERR9119556 | Pre-XDR-TB | lineage4.6.2.2 | None | ERR11488395 | MDR-TB | lineage4.1.1.3 | None | SRR29051493 | MDR-TB | lineage4.1.2.1 | None | ERR13290976 | MDR-TB | lineage2.2.1 | None | ERR5866333 | Pre-XDR-TB | lineage2.2.1 | None | SRR21576668 | MDR-TB | lineage2.2.1 | None | ERR13284042 | MDR-TB | lineage2.2.1 | None | SRR29050867 | MDR-TB | lineage4.1.2.1 | None | ERR5864694 | MDR-TB | lineage2.2.1 | None | SRR13583370 | MDR-TB | lineage4.1.2.1 | None | ERR11488748 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR5864690 | MDR-TB | lineage2.2.1 | None | ERR11488787 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR5864689 | MDR-TB | lineage2.2.1 | None | SRR29050722 | MDR-TB | lineage4.1.2.1 | None | ERR2510506 | MDR-TB | lineage3 | pk | ERR2510517 | Pre-XDR-TB | lineage3 | pk | ERR2516025 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR14802041 | Pre-XDR-TB | lineage4.2.1;lineage4.3.3 | None | ERR552518 | MDR-TB | lineage4.1.1.3 | sz | ERR11488514 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR5866334 | Pre-XDR-TB | lineage2.2.1 | None | SRR29051508 | MDR-TB | lineage4.1.2.1 | None | ERR11488963 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11067627 | XDR-TB | lineage2.2.1 | None | SRR29681215 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938709 | MDR-TB | lineage2.2.1 | None | SRR29050709 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488399 | MDR-TB | lineage4.1.1.3 | None | SRR13583398 | MDR-TB | lineage4.1.2.1 | None | SRR13583506 | MDR-TB | lineage4.1.2.1 | None | SRR29050633 | MDR-TB | lineage4.1.2.1 | None | SRR9224912 | MDR-TB | lineage4.1.2.1 | None | ERR2515345 | MDR-TB | lineage4.1.1.3 | za | SRR13583348 | MDR-TB | lineage4.1.2.1 | None | SRR29051504 | MDR-TB | lineage4.1.2.1 | None | SRR29274777 | MDR-TB | lineage2.2.1 | None | SRR29385431 | Pre-XDR-TB | lineage2.2.1 | None | SRR13583331 | MDR-TB | lineage4.1.2.1 | None | ERR6866935 | MDR-TB | lineage4.1.2.1 | None | ERR8665810 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812972 | Pre-XDR-TB | lineage4.3.3 | pe | ERR11488886 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29051524 | MDR-TB | lineage4.1.2.1 | None | SRR9224957 | MDR-TB | lineage4.1.2.1 | None | ERR11488922 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11488857 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29051251 | MDR-TB | lineage4.1.2.1 | None | ERR2307505 | MDR-TB | lineage2.2.1 | None | SRR13583328 | MDR-TB | lineage4.1.2.1 | None | SRR29051326 | MDR-TB | lineage4.1.2.1 | None | SRR13583441 | MDR-TB | lineage4.1.2.1 | None | SRR8589329 | Other | lineage4.9 | None | SRR8589331 | Other | lineage4.9 | None | SRR6485171 | RR-TB | lineage4.8 | None | SRR13583421 | MDR-TB | lineage4.1.2.1 | None | ERR13289388 | XDR-TB | lineage4.1.1.3 | None | SRR9224969 | MDR-TB | lineage4.1.2.1 | None | ERR5897113 | Pre-XDR-TB | lineage2.2.1 | None | SRR29050902 | MDR-TB | lineage4.1.2.1 | None | SRR13583384 | MDR-TB | lineage4.1.2.1 | None | ERR11488455 | MDR-TB | lineage4.1.1.3 | None | ERR2515474 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4812971 | Pre-XDR-TB | lineage4.3.3 | pe | SRR9224936 | MDR-TB | lineage4.1.2.1 | None | SRR29050909 | MDR-TB | lineage4.1.2.1 | None | SRR6896156 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR5864693 | MDR-TB | lineage2.2.1 | None | SRR13232490 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866332 | Pre-XDR-TB | lineage2.2.1 | None | ERR11466369 | MDR-TB | lineage4.1.1.3 | None | ERR11044658 | XDR-TB | lineage2.2.1 | None | SRR13583327 | MDR-TB | lineage4.1.2.1 | None | ERR11488548 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR9224964 | MDR-TB | lineage4.1.2.1 | None | SRR29051519 | MDR-TB | lineage4.1.2.1 | None | ERR8665875 | Pre-XDR-TB | lineage2.2.1 | None | SRR8357447 | Pre-XDR-TB | lineage2.2.1 | None | ERR550619 | Pre-XDR-TB | lineage4.1.1.3 | sz | SRR6964649 | MDR-TB | lineage3 | None | ERR11488344 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR13232703 | Pre-XDR-TB | lineage2.2.1 | None | SRR13583324 | MDR-TB | lineage4.1.2.1 | None | ERR4799492 | MDR-TB | lineage2.2.1 | in |
---|