lineage | Count |
---|---|
lineage2.2.1.1 | 5 |
lineage2.2.1 | 14 |
lineage4.5 | 4 |
lineage4.4.1.1 | 9 |
lineage4.3.2 | 5 |
lineage4.8 | 2 |
lineage2.2.2 | 2 |
lineage4.3.3 | 1 |
lineage3.1.1 | 1 |
lineage2.2.1;lineage4.8 | 1 |
lineage4.1.2.1 | 1 |
lineage1.1.2 | 1 |
lineage4.1.1.3 | 2 |
spoligotype | Count |
---|---|
None | 48 |
ID | Drug resistance | Lineage | Country iso2 | SRR27069456 | MDR-TB | lineage2.2.1.1 | None | ERR2515224 | XDR-TB | lineage2.2.1 | za | SRR10306017 | MDR-TB | lineage4.5 | None | ERR11043525 | MDR-TB | lineage4.4.1.1 | None | ERR1035350 | MDR-TB | lineage4.3.2 | br | SRR24709914 | MDR-TB | lineage2.2.1 | None | ERR5866329 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277167 | MDR-TB | lineage2.2.1.1 | None | SRR5486904 | MDR-TB | lineage4.4.1.1 | None | SRR11662535 | MDR-TB | lineage2.2.1 | None | ERR4830065 | MDR-TB | lineage4.8 | None | SRR25515020 | Pre-XDR-TB | lineage2.2.2 | None | SRR7341652 | MDR-TB | lineage4.4.1.1 | ro | ERR4828822 | MDR-TB | lineage2.2.1.1 | None | ERR3794476 | MDR-TB | lineage2.2.1 | None | ERR2199786 | MDR-TB | lineage2.2.1 | de | ERR2179647 | MDR-TB | lineage4.5 | None | SRR24256033 | Pre-XDR-TB | lineage4.3.3 | None | ERR5866330 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706693 | MDR-TB | lineage4.8 | None | SRR27069378 | MDR-TB | lineage2.2.1.1 | None | SRR28646117 | MDR-TB | lineage4.4.1.1 | None | SRR10525336 | MDR-TB | lineage4.4.1.1 | None | SRR9738538 | MDR-TB | lineage4.4.1.1 | None | SRR21277654 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR3639733 | MDR-TB | lineage4.4.1.1 | None | SRR6824591 | MDR-TB | lineage4.5 | cn | SRR7341699 | MDR-TB | lineage4.4.1.1 | ro | ERR2864227 | MDR-TB | lineage4.3.2 | pt | SRR25515777 | Pre-XDR-TB | lineage2.2.2 | None | ERR4796734 | Pre-XDR-TB | lineage2.2.1 | in | ERR1035277 | Pre-XDR-TB | lineage4.3.2 | br | ERR3077994 | MDR-TB | lineage3.1.1 | None | SRR7341681 | MDR-TB | lineage4.4.1.1 | None | SRR28706579 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830055 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR10680095 | MDR-TB | lineage4.1.2.1 | None | SRR15014666 | Pre-XDR-TB | lineage1.1.2 | None | ERR12118030 | MDR-TB | lineage4.1.1.3 | None | ERR5866331 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035344 | MDR-TB | lineage4.3.2 | br | SRR1723934 | MDR-TB | lineage4.5 | None | ERR4830957 | Pre-XDR-TB | lineage2.2.1 | np | SRR15315834 | MDR-TB | lineage2.2.1 | None | ERR4796875 | MDR-TB | lineage2.2.1 | in | ERR040115 | MDR-TB | lineage4.1.1.3 | ug | SRR6257017 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813799 | MDR-TB | lineage4.3.2 | br |
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