Rv2043c - p.Gly97Ser
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
1 HR-TB
47 MDR-TB
43 Pre-XDR-TB
3 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 58 |
| lineage1.1.2 | 3 |
| lineage4.8 | 6 |
| lineage2.2.2 | 6 |
| lineage4.2.1.1 | 2 |
| lineage4.3.3 | 6 |
| lineage4.1.2.1 | 3 |
| lineage6.2.3 | 1 |
| lineage4.6.1.2 | 3 |
| lineage4.2.1 | 4 |
| lineage4.1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage3 | 2 |
| lineage1.1.3.3 | 2 |
| lineage2.2.1;lineage4.2.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 105 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29539670 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772737 | MDR-TB | lineage1.1.2 | None | ERR1161621 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539563 | Pre-XDR-TB | lineage2.2.1 | None | ERR688043 | Pre-XDR-TB | lineage4.8 | pk | SRR6964604 | Pre-XDR-TB | lineage4.8 | None | SRR1158923 | MDR-TB | lineage2.2.1 | None | ERR5865223 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887706 | Pre-XDR-TB | lineage2.2.2 | None | ERR5865224 | Pre-XDR-TB | lineage2.2.1 | None | SRR23340038 | XDR-TB | lineage4.2.1.1 | None | ERR2307689 | Pre-XDR-TB | lineage2.2.1 | None | SRR28394043 | Pre-XDR-TB | lineage4.3.3 | None | ERR4822314 | MDR-TB | lineage2.2.1 | de | SRR6397748 | MDR-TB | lineage2.2.1 | ca | ERR8665877 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516492 | Pre-XDR-TB | lineage4.3.3 | pe | ERR2516455 | Pre-XDR-TB | lineage4.3.3 | pe | ERR2516619 | Pre-XDR-TB | lineage4.3.3 | pe | ERR2516570 | Pre-XDR-TB | lineage4.3.3 | pe | ERR2510133 | MDR-TB | lineage4.1.2.1 | pe | SRR6824499 | Pre-XDR-TB | lineage2.2.1 | cn | ERR10679993 | MDR-TB | lineage6.2.3 | None | SRR10397139 | MDR-TB | lineage2.2.1 | None | SRR1181107 | MDR-TB | lineage2.2.1 | None | SRR28394010 | MDR-TB | lineage4.3.3 | None | SRR8360304 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257024 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969884 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307635 | MDR-TB | lineage2.2.1 | None | SRR1162533 | MDR-TB | lineage2.2.1 | None | SRR15315900 | Other | lineage2.2.1 | None | ERR11082336 | MDR-TB | lineage4.6.1.2 | None | ERR13285845 | Pre-XDR-TB | lineage4.2.1 | None | ERR13284449 | MDR-TB | lineage4.6.1.2 | None | SRR1181311 | MDR-TB | lineage2.2.1 | None | ERR10762304 | Pre-XDR-TB | lineage4.2.1 | None | ERR4831103 | Pre-XDR-TB | lineage2.2.1 | None | ERR13110306 | Other | lineage4.1.1 | None | ERR4872327 | Pre-XDR-TB | lineage4.2.1 | None | SRR26112015 | Other | lineage1.1.2 | None | SRR23340030 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR29017036 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048851 | Pre-XDR-TB | lineage2.2.2 | None | SRR29051499 | MDR-TB | lineage4.3.4.1 | None | ERR4276908 | MDR-TB | lineage2.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR11488607 | MDR-TB | lineage4.1.1.3 | None | SRR14807563 | MDR-TB | lineage2.2.1 | None | SRR29017655 | MDR-TB | lineage3 | None | SRR25207265 | Pre-XDR-TB | lineage2.2.1 | None | ERR16022309 | MDR-TB | lineage1.1.3.3 | None | ERR16022323 | XDR-TB | lineage4.8 | None | SRR1166163 | MDR-TB | lineage4.1.2.1 | ro | SRR6397399 | MDR-TB | lineage2.2.1 | ca | SRR18715333 | MDR-TB | lineage2.2.1;lineage4.2.1.1 | None | ERR5865755 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832398 | MDR-TB | lineage2.2.1 | None | ERR1034611 | Pre-XDR-TB | lineage4.8 | pk | ERR779876 | MDR-TB | lineage4.1.2.1 | pe | ERR5897103 | XDR-TB | lineage4.8 | None | SRR6797659 | Other | lineage1.1.3.3 | None | ERR144608 | MDR-TB | lineage2.2.1 | ru | ERR234688 | Pre-XDR-TB | lineage2.2.1 | ru | ERR553351 | MDR-TB | lineage2.2.1 | None | SAMN02419580 | MDR-TB | lineage2.2.1 | by | SRR27450407 | RR-TB | lineage2.2.1.1 | None | SRR28045245 | Pre-XDR-TB | lineage2.2.1 | None | SRR23311013 | HR-TB | lineage4.2.1 | None | ERR4553595 | MDR-TB | lineage3 | None | SRR24256097 | MDR-TB | lineage2.2.1 | None | ERR2307677 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865961 | MDR-TB | lineage2.2.1 | None | SRR1013551 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013552 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048850 | Pre-XDR-TB | lineage2.2.2 | None | ERR13284026 | MDR-TB | lineage2.2.1 | None | SRR24256364 | MDR-TB | lineage2.2.1 | None | SRR26112016 | Other | lineage1.1.2 | None | SRR18715108 | MDR-TB | lineage2.2.1 | None | ERR13244332 | MDR-TB | lineage2.2.1 | None | ERR11080966 | MDR-TB | lineage4.6.1.2 | None | SRR13423613 | Pre-XDR-TB | lineage4.4.2 | None | SRR6785549 | MDR-TB | lineage2.2.1 | None | SAMN02360555 | Pre-XDR-TB | lineage2.2.2 | kr | SRR15315911 | Other | lineage2.2.1 | None | ERR7911089 | MDR-TB | lineage2.2.1 | md | ERR133873 | Pre-XDR-TB | lineage2.2.1 | ru | SRR5709912 | Pre-XDR-TB | lineage2.2.1 | th | ERR11488608 | MDR-TB | lineage4.1.1.3 | None | SRR15315896 | Other | lineage2.2.1 | None | SRR13583500 | MDR-TB | lineage4.3.4.1 | None | ERR2307758 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807574 | MDR-TB | lineage2.2.1 | None | ERR5865225 | Pre-XDR-TB | lineage2.2.1 | None | SRR15315894 | Other | lineage2.2.1 | None | SRR6257080 | MDR-TB | lineage4.8 | None | SRR8365892 | MDR-TB | lineage2.2.1 | None | ERR5865756 | Pre-XDR-TB | lineage2.2.1 | None | SRR15315901 | Other | lineage2.2.1 | None | SRR21276912 | Other | lineage2.2.1 | None | SRR29772589 | MDR-TB | lineage1.1.3 | None | SRR29539190 | MDR-TB | lineage2.2.1 | None | ERR4553987 | MDR-TB | lineage2.2.1 | None | ERR13290922 | Pre-XDR-TB | lineage2.2.1 | None |
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