lineage | Count |
---|---|
lineage4.3.4.2 | 4 |
lineage2.2.1 | 22 |
lineage4.3.3 | 9 |
lineage2.2.1;lineage4.3.3 | 1 |
lineage4.4.1.1 | 1 |
lineage4.1.2.1 | 2 |
lineage2.2.2 | 1 |
lineage4.1.3 | 1 |
lineage4.5 | 1 |
lineage5.1.4 | 2 |
lineage1.1.1 | 1 |
lineage4.3.3;lineage4.6.1.2 | 1 |
lineage4.1.1 | 2 |
lineage4.8 | 1 |
lineage2.2.1.1 | 1 |
lineage4.2.1 | 1 |
lineage1.2.2.2 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 53 |
ID | Drug resistance | Lineage | Country iso2 | ERR4553669 | MDR-TB | lineage4.3.4.2 | None | ERR752199 | Pre-XDR-TB | lineage2.2.1 | th | ERR2510838 | Pre-XDR-TB | lineage2.2.1 | it | SRR24709919 | MDR-TB | lineage2.2.1 | None | SRR24256149 | Pre-XDR-TB | lineage4.3.3 | None | ERR2510845 | Pre-XDR-TB | lineage2.2.1 | it | ERR2516648 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | pe | ERR11776020 | MDR-TB | lineage4.4.1.1 | None | SRR13232455 | MDR-TB | lineage2.2.1 | None | ERR3148042 | MDR-TB | lineage4.1.2.1 | None | SAMN02053746 | MDR-TB | lineage4.3.3 | za | SRR833106 | MDR-TB | lineage4.3.3 | None | ERR5865552 | MDR-TB | lineage2.2.1 | None | SRR21277696 | Other | lineage2.2.1 | None | ERR9027236 | MDR-TB | lineage4.3.3 | None | SRR3082123 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119745 | MDR-TB | lineage2.2.2 | None | SRR26937138 | Pre-XDR-TB | lineage2.2.1 | None | ERR9027229 | MDR-TB | lineage4.3.3 | None | SAMN02231181 | MDR-TB | lineage4.1.3 | ml | SRR6824363 | RR-TB | lineage2.2.1 | cn | SRR6832773 | Pre-XDR-TB | lineage4.3.3 | None | SRR20969955 | Other | lineage4.5 | None | SRR28394258 | Pre-XDR-TB | lineage2.2.1 | None | ERR702408 | MDR-TB | lineage5.1.4 | gh | SRR18715039 | MDR-TB | lineage2.2.1 | None | SRR3085358 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811335 | Pre-XDR-TB | lineage2.2.1 | cn | SRR11662532 | MDR-TB | lineage1.1.1 | None | SRR833037 | MDR-TB | lineage4.3.3 | None | ERR2706966 | MDR-TB | lineage4.3.3;lineage4.6.1.2 | cd | ERR3287712 | Pre-XDR-TB | lineage4.1.1 | pe | ERR4799610 | MDR-TB | lineage4.8 | in | ERR4812743 | MDR-TB | lineage4.1.1 | pe | ERR4810795 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175205 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR5153719 | Pre-XDR-TB | lineage4.2.1 | None | ERR4553728 | MDR-TB | lineage4.3.4.2 | None | ERR9027256 | MDR-TB | lineage4.3.3 | None | ERR137265 | MDR-TB | lineage2.2.1 | ru | SRR3085325 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799883 | Pre-XDR-TB | lineage1.2.2.2 | in | ERR10225449 | MDR-TB | lineage3 | None | ERR5865470 | MDR-TB | lineage2.2.1 | None | SRR11662634 | MDR-TB | lineage2.2.1 | None | ERR751314 | MDR-TB | lineage5.1.4 | gh | ERR4553844 | MDR-TB | lineage4.3.4.2 | None | ERR5865471 | MDR-TB | lineage2.2.1 | None | ERR2707212 | MDR-TB | lineage4.3.3 | cd | SRR3086407 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911300 | MDR-TB | lineage2.2.1 | vn | SRR1166086 | MDR-TB | lineage4.1.2.1 | ro | ERR4813048 | Pre-XDR-TB | lineage4.3.4.2 | pe |
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