lineage | Count |
---|---|
lineage2.2.1 | 23 |
lineage4.3.3 | 12 |
lineage4.8 | 1 |
lineage2.2.1;lineage4.3.3 | 1 |
lineage4.3.4.2 | 6 |
lineage4.1.3 | 1 |
lineage4.1.1 | 3 |
lineage4.1.2.1 | 3 |
lineage4.5 | 1 |
lineage1.2.2.2 | 1 |
lineage4.3.3;lineage4.6.1.2 | 2 |
lineage2.2.2 | 2 |
lineage5.1.4 | 2 |
lineage3 | 1 |
lineage1.1.1 | 1 |
lineage4.2.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 63 |
ID | Drug resistance | Lineage | Country iso2 | SRR21277696 | Other | lineage2.2.1 | None | ERR4810795 | Pre-XDR-TB | lineage2.2.1 | None | ERR9027236 | MDR-TB | lineage4.3.3 | None | SRR3082123 | Pre-XDR-TB | lineage2.2.1 | None | ERR752199 | Pre-XDR-TB | lineage2.2.1 | th | SRR28394258 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799610 | MDR-TB | lineage4.8 | in | ERR2516648 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | pe | SRR29016873 | MDR-TB | lineage4.3.4.2 | None | SRR3086407 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085325 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02231181 | MDR-TB | lineage4.1.3 | ml | ERR4553844 | MDR-TB | lineage4.3.4.2 | None | ERR4812743 | MDR-TB | lineage4.1.1 | pe | ERR13286034 | Pre-XDR-TB | lineage4.3.3 | None | ERR3148042 | MDR-TB | lineage4.1.2.1 | None | SRR20969955 | Other | lineage4.5 | None | SRR833037 | MDR-TB | lineage4.3.3 | None | ERR2510838 | Pre-XDR-TB | lineage2.2.1 | it | SRR11662634 | MDR-TB | lineage2.2.1 | None | SRR26937138 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813048 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR5865552 | MDR-TB | lineage2.2.1 | None | ERR9027229 | MDR-TB | lineage4.3.3 | None | ERR4799883 | Pre-XDR-TB | lineage1.2.2.2 | in | SRR24256149 | Pre-XDR-TB | lineage4.3.3 | None | SRR24709919 | MDR-TB | lineage2.2.1 | None | ERR2510845 | Pre-XDR-TB | lineage2.2.1 | it | SRR29231684 | MDR-TB | lineage4.3.3;lineage4.6.1.2 | None | ERR13260667 | Pre-XDR-TB | lineage4.1.1 | None | SRR28119748 | MDR-TB | lineage2.2.2 | None | SRR833106 | MDR-TB | lineage4.3.3 | None | SRR29539018 | HR-TB | lineage2.2.1 | None | ERR702408 | MDR-TB | lineage5.1.4 | gh | ERR10225449 | MDR-TB | lineage3 | None | ERR5865470 | MDR-TB | lineage2.2.1 | None | ERR751314 | MDR-TB | lineage5.1.4 | gh | ERR2706966 | MDR-TB | lineage4.3.3;lineage4.6.1.2 | cd | ERR5865471 | MDR-TB | lineage2.2.1 | None | SRR11662532 | MDR-TB | lineage1.1.1 | None | ERR3287712 | Pre-XDR-TB | lineage4.1.1 | pe | SRR13232455 | MDR-TB | lineage2.2.1 | None | ERR4553728 | MDR-TB | lineage4.3.4.2 | None | SRR28119745 | MDR-TB | lineage2.2.2 | None | ERR4553669 | MDR-TB | lineage4.3.4.2 | None | SRR5153719 | Pre-XDR-TB | lineage4.2.1 | None | ERR13285093 | MDR-TB | lineage4.1.2.1 | None | ERR7911300 | MDR-TB | lineage2.2.1 | vn | ERR9027256 | MDR-TB | lineage4.3.3 | None | SRR22175205 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11776020 | MDR-TB | lineage4.4.1.1 | None | SRR6832773 | Pre-XDR-TB | lineage4.3.3 | None | ERR13093934 | Pre-XDR-TB | lineage4.3.3 | None | SRR18715039 | MDR-TB | lineage2.2.1 | None | SRR6824363 | RR-TB | lineage2.2.1 | cn | SRR3085358 | Pre-XDR-TB | lineage2.2.1 | None | ERR137265 | MDR-TB | lineage2.2.1 | ru | SRR29056141 | MDR-TB | lineage4.3.3 | None | SRR29017022 | MDR-TB | lineage4.3.4.2 | None | SAMN02053746 | MDR-TB | lineage4.3.3 | za | ERR4811335 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2707212 | MDR-TB | lineage4.3.3 | cd | SRR1166086 | MDR-TB | lineage4.1.2.1 | ro |
---|