Rv2043c - p.Leu159Arg
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
1 HR-TB
44 MDR-TB
45 Pre-XDR-TB
2 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 50 |
| lineage1.1.1.1 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage2.2.2 | 13 |
| lineage4.2.1 | 10 |
| lineage2.2.1;lineage3 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage3 | 2 |
| lineage4.2.2 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2.1 | 1 |
| lineage4 | 1 |
| lineage6 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 93 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR24710152 | Pre-XDR-TB | lineage2.2.1 | None | SRR5073854 | MDR-TB | lineage2.2.1 | vn | SRR12062516 | Pre-XDR-TB | lineage2.2.1 | None | SRR12062517 | Pre-XDR-TB | lineage2.2.1 | None | SRR26937048 | HR-TB | lineage1.1.1.1 | None | ERR5865697 | MDR-TB | lineage2.2.1 | None | SRR12062524 | MDR-TB | lineage2.2.1 | None | SRR26937135 | MDR-TB | lineage2.2.1 | None | ERR11081292 | MDR-TB | lineage1.2.1.2.1 | None | ERR13194019 | Pre-XDR-TB | lineage2.2.2 | None | SRR26936961 | Pre-XDR-TB | lineage2.2.1 | None | ERR4832043 | MDR-TB | lineage2.2.1 | None | ERR13194094 | Pre-XDR-TB | lineage2.2.2 | None | SRR23340143 | Pre-XDR-TB | lineage4.2.1 | None | SRR18715464 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040158 | MDR-TB | lineage2.2.1 | None | SRR12142415 | MDR-TB | lineage2.2.1 | None | ERR8665737 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827856 | MDR-TB | lineage2.2.1;lineage3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274206 | MDR-TB | lineage4.1.2.1 | None | ERR8665708 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290932 | MDR-TB | lineage4.4.2 | None | ERR2510496 | Pre-XDR-TB | lineage3 | pk | ERR2510529 | MDR-TB | lineage3 | pk | ERR4797908 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797297 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827504 | MDR-TB | lineage2.2.1;lineage3 | None | SRR12062523 | MDR-TB | lineage2.2.1 | None | ERR4831936 | MDR-TB | lineage2.2.1 | vn | ERR8665676 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665590 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911042 | MDR-TB | lineage2.2.1 | md | ERR4832012 | MDR-TB | lineage2.2.1 | vn | ERR552158 | Pre-XDR-TB | lineage2.2.2 | None | SRR10040257 | MDR-TB | lineage2.2.1 | None | ERR2512878 | MDR-TB | lineage4.2.1 | gb | ERR2512440 | MDR-TB | lineage4.2.1 | gb | SRR25207350 | MDR-TB | lineage4.2.2 | None | ERR4423626 | Pre-XDR-TB | lineage4.6.2.2 | None | ERR8665709 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665736 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256131 | Pre-XDR-TB | lineage2.2.1 | None | ERR13194009 | Pre-XDR-TB | lineage2.2.2 | None | ERR552157 | Pre-XDR-TB | lineage2.2.2 | None | SRR6256976 | Pre-XDR-TB | lineage4.2.1 | ru | SRR16088478 | MDR-TB | lineage4.2.1 | None | ERR5865698 | MDR-TB | lineage2.2.1 | None | ERR8774243 | Pre-XDR-TB | lineage4.6.2.2 | None | ERR13245559 | Pre-XDR-TB | lineage2.2.2 | None | ERR13194076 | Pre-XDR-TB | lineage2.2.2 | None | ERR8665675 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232734 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798632 | MDR-TB | lineage2.2.1 | None | SRR25827738 | Pre-XDR-TB | lineage2.2.1 | None | ERR13193980 | XDR-TB | lineage2.2.2 | None | SRR998857 | Pre-XDR-TB | lineage4.2.1 | None | ERR2307737 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420278 | Pre-XDR-TB | lineage2.2.1 | None | SRR7068967 | MDR-TB | lineage4.2.1 | None | ERR13194001 | Pre-XDR-TB | lineage2.2.2 | None | SRR29681384 | Pre-XDR-TB | lineage2.2.1 | None | ERR13194018 | Pre-XDR-TB | lineage2.2.2 | None | SRR10040266 | MDR-TB | lineage2.2.2 | None | ERR13245251 | Pre-XDR-TB | lineage2.2.2 | None | SRR29055618 | MDR-TB | lineage4.3.4.2.1 | None | ERR13266502 | MDR-TB | lineage2.2.1 | None | SRR6964492 | MDR-TB | lineage1.1.2 | None | SRR25207321 | MDR-TB | lineage2.2.1 | None | SRR7069713 | MDR-TB | lineage4.2.1 | None | ERR4796528 | Pre-XDR-TB | lineage2.2.1 | in | ERR13284012 | MDR-TB | lineage1.2.1.2.1 | None | ERR8665608 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645950 | Pre-XDR-TB | lineage4.2.1 | None | ERR13245229 | Pre-XDR-TB | lineage2.2.2 | None | ERR11083020 | MDR-TB | lineage2.2.1 | None | SRR28706551 | MDR-TB | lineage2.2.1 | None | SRR25827489 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3.1.2.1 | None | SRR28393600 | Pre-XDR-TB | lineage4 | None | ERR4811333 | MDR-TB | lineage4.2.2 | cn | ERR4831919 | MDR-TB | lineage2.2.1 | None | ERR4831918 | MDR-TB | lineage2.2.1 | None | ERR4831979 | MDR-TB | lineage2.2.1 | vn | ERR3806631 | MDR-TB | lineage6 | None | ERR2513608 | MDR-TB | lineage4.2.1 | gb | SRR13232704 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035100 | Pre-XDR-TB | lineage2.2.1.1 | vn | SRR25827452 | MDR-TB | lineage1.1.2;lineage2.2.1;lineage4.2.2.2 | None | ERR13284606 | MDR-TB | lineage2.2.1 | None | SRR10040254 | Pre-XDR-TB | lineage2.2.1 | None | DRR184610 | RR-TB | lineage2.2.1 | vn | SRR5065596 | MDR-TB | lineage2.2.1 | vn | SRR5065588 | MDR-TB | lineage2.2.1 | vn |
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