lineage | Count |
---|---|
lineage1.1.3.1 | 3 |
lineage2.2.1 | 44 |
3 | |
lineage1.1.2 | 5 |
lineage2.2 | 1 |
lineage4.8;lineage2.2.1 | 2 |
lineage3 | 6 |
lineage4.1.2.1 | 10 |
lineage4.2.1;lineage2.2.1 | 1 |
lineage4.1.2.1;lineage4.1.1 | 2 |
lineage4.8 | 1 |
lineage2.2.2 | 2 |
lineage4.2.2 | 1 |
lineage4.3.3 | 1 |
lineage3.1.2 | 1 |
spoligotype | Count |
---|---|
None | 83 |
ID | Drug resistance | Lineage | Country iso2 | ERR2516763 | MDR-TB | lineage1.1.3.1 | gb | ERR4827895 | MDR-TB | lineage2.2.1 | None | SRR5485574 | MDR-TB | None | ERR2516881 | MDR-TB | lineage1.1.3.1 | gb | SRR8380866 | Pre-XDR-TB | lineage1.1.2 | in | ERR2516833 | MDR-TB | lineage1.1.3.1 | gb | SRR23339949 | MDR-TB | lineage2.2 | None | ERR4822596 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822594 | Pre-XDR-TB | lineage4.8;lineage2.2.1 | tm | ERR4822586 | Pre-XDR-TB | lineage4.8;lineage2.2.1 | tm | ERR4827923 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830603 | MDR-TB | lineage2.2.1 | tm | SRR5710014 | Pre-XDR-TB | lineage2.2.1 | th | SRR5710028 | Pre-XDR-TB | lineage2.2.1 | th | ERR4830581 | MDR-TB | lineage2.2.1 | tm | ERR4830590 | MDR-TB | lineage2.2.1 | tm | ERR4830599 | MDR-TB | lineage2.2.1 | tm | ERR4830596 | MDR-TB | lineage2.2.1 | tm | ERR4830597 | MDR-TB | lineage2.2.1 | tm | ERR4830614 | MDR-TB | lineage2.2.1 | tm | ERR4830600 | MDR-TB | lineage2.2.1 | tm | ERR4830610 | MDR-TB | lineage2.2.1 | tm | ERR4830625 | MDR-TB | lineage2.2.1 | tm | ERR4830613 | MDR-TB | lineage2.2.1 | tm | ERR4830626 | MDR-TB | lineage2.2.1 | tm | ERR4828951 | MDR-TB | lineage2.2.1 | None | SRR6964638 | MDR-TB | lineage1.1.2 | None | ERR4831498 | MDR-TB | lineage1.1.2 | None | SRR6964541 | MDR-TB | lineage3 | None | ERR3014584 | MDR-TB | lineage4.1.2.1 | tn | SRR6824542 | Pre-XDR-TB | lineage2.2.1 | cn | ERR3014608 | MDR-TB | lineage4.1.2.1 | tn | ERR3014615 | MDR-TB | lineage4.1.2.1 | tn | ERR3014609 | MDR-TB | lineage4.1.2.1 | tn | ERR3014623 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR3014620 | MDR-TB | lineage4.1.2.1 | tn | SRR8651607 | Pre-XDR-TB | lineage2.2.1 | cn | SRR8651594 | Pre-XDR-TB | lineage2.2.1 | cn | ERR3014625 | MDR-TB | lineage4.1.2.1 | tn | ERR137271 | MDR-TB | lineage4.2.1;lineage2.2.1 | ru | SRR8651646 | Pre-XDR-TB | lineage2.2.1 | cn | ERR027468 | MDR-TB | lineage2.2.1 | None | SRR8651661 | Pre-XDR-TB | lineage2.2.1 | cn | ERR027452 | MDR-TB | lineage2.2.1 | ru | ERR10680223 | MDR-TB | lineage2.2.1 | None | ERR10762418 | Pre-XDR-TB | lineage2.2.1 | None | ERR137236 | MDR-TB | lineage2.2.1 | ru | ERR4553417 | MDR-TB | lineage3 | None | ERR3794419 | MDR-TB | lineage2.2.1 | None | ERR3794395 | MDR-TB | lineage2.2.1 | None | ERR4178219 | Pre-XDR-TB | lineage4.1.2.1;lineage4.1.1 | None | ERR4553829 | MDR-TB | lineage3 | None | ERR4553803 | Pre-XDR-TB | lineage3 | None | ERR4553492 | MDR-TB | None | ERR4553724 | Pre-XDR-TB | lineage3 | None | ERR6865775 | Pre-XDR-TB | lineage4.1.2.1;lineage4.1.1 | None | ERR4553878 | MDR-TB | None | ERR4800467 | Pre-XDR-TB | lineage4.8 | in | ERR5865746 | MDR-TB | lineage2.2.1 | None | ERR5865747 | MDR-TB | lineage2.2.1 | None | SRR10500306 | MDR-TB | lineage1.1.2 | None | SRR10380029 | Pre-XDR-TB | lineage2.2.1 | None | SRR11567790 | Pre-XDR-TB | lineage2.2.1 | None | SRR1144796 | Pre-XDR-TB | lineage2.2.2 | None | SRR11567793 | Pre-XDR-TB | lineage2.2.1 | None | SRR15014636 | Pre-XDR-TB | lineage1.1.2 | None | SRR11567792 | Pre-XDR-TB | lineage2.2.1 | None | SRR13120450 | Pre-XDR-TB | lineage2.2.1 | None | SRR11567788 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969422 | MDR-TB | lineage4.2.2 | None | SRR18715097 | Pre-XDR-TB | lineage4.3.3 | None | SRR15315994 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082397 | MDR-TB | lineage4.1.2.1 | None | SRR21276916 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424756 | MDR-TB | lineage3.1.2 | None | SRR3082130 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085361 | Pre-XDR-TB | lineage2.2.1 | None | SRR3082135 | MDR-TB | lineage4.1.2.1 | None | ERR3275831 | MDR-TB | lineage2.2.1 | nl | SRR3085366 | MDR-TB | lineage4.1.2.1 | None | SAMN02398703 | Pre-XDR-TB | lineage2.2.2 | kr | ERR2510522 | MDR-TB | lineage3 | pk | SRR1723462 | Pre-XDR-TB | lineage2.2.1 | cn |
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