Rv2043c - p.Leu4Trp
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
72 MDR-TB
38 Pre-XDR-TB
12 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 19 |
| lineage2.2.1 | 64 |
| lineage1.1.2 | 5 |
| lineage3 | 10 |
| lineage4.8 | 1 |
| lineage4.9 | 1 |
| lineage4.2.2 | 1 |
| lineage3.1.2 | 1 |
| 6 | |
| lineage2.2.1;lineage4.8 | 2 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage1.1.3.1 | 3 |
| lineage4.3.3 | 2 |
| lineage4.1.1;lineage4.1.2.1 | 2 |
| lineage2.2.2 | 2 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 122 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3014584 | MDR-TB | lineage4.1.2.1 | tn | ERR3794419 | MDR-TB | lineage2.2.1 | None | ERR11552013 | MDR-TB | lineage4.1.2.1 | None | ERR3014620 | MDR-TB | lineage4.1.2.1 | tn | SRR28706553 | Pre-XDR-TB | lineage2.2.1 | None | SRR3082130 | Pre-XDR-TB | lineage2.2.1 | None | SRR6964638 | MDR-TB | lineage1.1.2 | None | SRR25389445 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284387 | MDR-TB | lineage2.2.1 | None | ERR5865747 | MDR-TB | lineage2.2.1 | None | SRR6964541 | MDR-TB | lineage3 | None | SRR13120450 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865746 | MDR-TB | lineage2.2.1 | None | ERR11551993 | MDR-TB | lineage4.1.2.1 | None | ERR4800467 | Pre-XDR-TB | lineage4.8 | in | SRR24709972 | MDR-TB | lineage2.2.1 | None | SRR5485574 | MDR-TB | lineage4.9 | None | SRR20969422 | MDR-TB | lineage4.2.2 | None | SRR22424756 | MDR-TB | lineage3.1.2 | None | SRR28706546 | MDR-TB | lineage2.2.1 | None | SRR10380029 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553803 | Pre-XDR-TB | None | SRR28239747 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553724 | Pre-XDR-TB | None | ERR4822594 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | tm | ERR4830600 | MDR-TB | lineage2.2.1 | tm | ERR4830597 | MDR-TB | lineage2.2.1 | tm | ERR4830599 | MDR-TB | lineage2.2.1 | tm | ERR4830603 | MDR-TB | lineage2.2.1 | tm | ERR4830625 | MDR-TB | lineage2.2.1 | tm | ERR4828951 | MDR-TB | lineage2.2.1 | None | ERR137271 | MDR-TB | lineage2.2.1;lineage4.2.1 | ru | ERR2516763 | MDR-TB | lineage1.1.3.1 | gb | ERR2516881 | MDR-TB | lineage1.1.3.1 | gb | ERR2516833 | MDR-TB | lineage1.1.3.1 | gb | SRR5710014 | Pre-XDR-TB | lineage2.2.1 | th | SRR5710028 | Pre-XDR-TB | lineage2.2.1 | th | SRR6824542 | Pre-XDR-TB | lineage2.2.1 | cn | SRR3085366 | MDR-TB | lineage4.1.2.1 | None | SRR11567790 | XDR-TB | lineage2.2.1 | None | SRR18715097 | Pre-XDR-TB | lineage4.3.3 | None | ERR550916 | XDR-TB | lineage2.2.1 | None | SRR24710219 | MDR-TB | lineage2.2.1 | None | SRR10828190 | Pre-XDR-TB | lineage2.2.1 | None | ERR11552004 | MDR-TB | lineage4.1.2.1 | None | ERR11552249 | MDR-TB | lineage4.1.2.1 | None | ERR11082397 | MDR-TB | lineage4.1.2.1 | None | SRR15315994 | XDR-TB | lineage2.2.1 | None | SRR29017597 | MDR-TB | lineage3 | None | SRR21276916 | XDR-TB | lineage2.2.1 | None | SRR11567792 | XDR-TB | lineage2.2.1 | None | ERR11552009 | MDR-TB | lineage4.1.2.1 | None | SRR1723462 | Pre-XDR-TB | lineage2.2.1 | cn | ERR6865775 | Pre-XDR-TB | lineage4.1.1;lineage4.1.2.1 | None | ERR027468 | MDR-TB | lineage2.2.1 | None | ERR13264904 | MDR-TB | lineage2.2.1 | None | ERR3014608 | MDR-TB | lineage4.1.2.1 | tn | ERR3014623 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR4827923 | Pre-XDR-TB | lineage2.2.1 | None | ERR11551988 | MDR-TB | lineage4.1.2.1 | None | SRR25389446 | Pre-XDR-TB | lineage2.2.1 | None | SRR24709887 | MDR-TB | lineage2.2.1 | None | ERR3014625 | MDR-TB | lineage4.1.2.1 | tn | SRR15014636 | Pre-XDR-TB | lineage1.1.2 | None | ERR3794395 | MDR-TB | lineage2.2.1 | None | SRR24256197 | MDR-TB | lineage4.3.3 | None | ERR11552006 | MDR-TB | lineage4.1.2.1 | None | SRR1144796 | Pre-XDR-TB | lineage2.2.2 | None | SRR29539538 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600484 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510522 | MDR-TB | lineage3 | pk | SRR24710070 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR4831498 | MDR-TB | lineage1.1.2 | None | SRR10500306 | MDR-TB | lineage1.1.2 | None | ERR3014609 | MDR-TB | lineage4.1.2.1 | tn | ERR10680223 | MDR-TB | lineage2.2.1 | None | ERR4827895 | MDR-TB | lineage2.2.1 | None | SRR8651594 | XDR-TB | lineage2.2.1 | cn | SRR8651661 | XDR-TB | lineage2.2.1 | cn | SAMN02398703 | Pre-XDR-TB | lineage2.2.2 | kr | SRR8380866 | Pre-XDR-TB | lineage1.1.2 | in | SRR8651607 | XDR-TB | lineage2.2.1 | cn | ERR552237 | XDR-TB | lineage2.2.1 | None | ERR4822596 | Pre-XDR-TB | lineage2.2.1 | tm | SRR11567788 | XDR-TB | lineage2.2.1 | None | ERR4830581 | MDR-TB | lineage2.2.1 | tm | ERR4830610 | MDR-TB | lineage2.2.1 | tm | ERR4830614 | MDR-TB | lineage2.2.1 | tm | ERR4830626 | MDR-TB | lineage2.2.1 | tm | ERR4830590 | MDR-TB | lineage2.2.1 | tm | ERR4830596 | MDR-TB | lineage2.2.1 | tm | ERR4830613 | MDR-TB | lineage2.2.1 | tm | SRR3082135 | MDR-TB | lineage4.1.2.1 | None | SRR28394028 | MDR-TB | lineage4 | None | ERR137236 | MDR-TB | lineage2.2.1 | ru | ERR10762418 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256130 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307378 | MDR-TB | lineage2.2.1 | None | SRR23339949 | MDR-TB | lineage2.2.1 | None | SRR11567793 | XDR-TB | lineage2.2.1 | None | SRR8651646 | XDR-TB | lineage2.2.1 | cn | SRR29016880 | MDR-TB | lineage3 | None | SRR29017217 | MDR-TB | lineage3 | None | SRR29017440 | MDR-TB | lineage3 | None | ERR4822586 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | tm | ERR13266986 | Pre-XDR-TB | lineage3 | None | SRR29017113 | MDR-TB | lineage3 | None | ERR4553417 | MDR-TB | None | ERR4553492 | MDR-TB | None | ERR4553829 | MDR-TB | None | ERR4553878 | MDR-TB | None | SRR3085361 | Pre-XDR-TB | lineage2.2.1 | None | ERR3014615 | MDR-TB | lineage4.1.2.1 | tn | SRR21690725 | MDR-TB | lineage2.2.1 | None | ERR13284970 | MDR-TB | lineage4.1.2.1 | None | ERR3275831 | MDR-TB | lineage2.2.1 | nl | ERR11551997 | MDR-TB | lineage4.1.2.1 | None | ERR4178219 | Pre-XDR-TB | lineage4.1.1;lineage4.1.2.1 | None | SRR25207034 | Pre-XDR-TB | lineage2.2.1 | None | SRR4423166 | Pre-XDR-TB | lineage3 | None | SRR29017452 | Pre-XDR-TB | lineage3 | None | SRR29093920 | Pre-XDR-TB | lineage2.2.1 | None |
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