Rv2043c - p.Lys96Glu
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
2 RR-TB
5 HR-TB
41 MDR-TB
40 Pre-XDR-TB
5 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.7 | 2 |
| lineage2.2.1 | 48 |
| lineage4.8 | 6 |
| lineage1.1.2 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.1.3 | 6 |
| lineage3.1.2.1 | 3 |
| lineage4.4.1.1 | 2 |
| lineage4.1.1.3.1 | 4 |
| lineage4.2.1 | 3 |
| lineage3.1.1 | 1 |
| lineage3 | 2 |
| lineage3.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.3 | 2 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.3.4.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 93 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13285074 | MDR-TB | lineage4.7 | None | ERR4827650 | MDR-TB | lineage2.2.1 | None | ERR11081950 | MDR-TB | lineage4.8 | None | SRR13232714 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284963 | MDR-TB | lineage4.8 | None | ERR4797043 | MDR-TB | lineage1.1.2 | in | SRR11662519 | MDR-TB | lineage2.2.1 | None | ERR4811239 | RR-TB | lineage2.2.1 | None | SRR23311018 | HR-TB | lineage2.2.1 | None | SRR23310911 | XDR-TB | lineage2.2.1 | None | ERR2677387 | Pre-XDR-TB | lineage2.2.1 | de | ERR2516531 | MDR-TB | lineage4.1.2.1 | pe | ERR2041720 | MDR-TB | lineage2.2.1 | rs | ERR2679263 | MDR-TB | lineage4.1.3 | None | ERR2677444 | MDR-TB | lineage3.1.2.1 | de | ERR10748509 | MDR-TB | lineage4.4.1.1 | None | ERR228024 | MDR-TB | lineage2.2.1 | ru | ERR230097 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR6832297 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864469 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865667 | MDR-TB | lineage2.2.1 | None | ERR8665770 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755744 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539381 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864470 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645861 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748283 | MDR-TB | lineage4.4.1.1 | None | ERR4827514 | MDR-TB | lineage2.2.1 | None | ERR13285123 | MDR-TB | lineage4.8 | None | SRR29539204 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872272 | XDR-TB | lineage4.2.1 | None | ERR13260735 | HR-TB | lineage3.1.1 | None | ERR13276267 | MDR-TB | lineage3.1.2.1 | None | SRR998767 | MDR-TB | lineage4.1.3 | None | ERR11043008 | MDR-TB | lineage4.8 | None | ERR4797720 | XDR-TB | lineage3 | in | SAMN02231159 | MDR-TB | lineage4.1.3 | None | ERR4798517 | MDR-TB | lineage3.1 | in | ERR4872298 | XDR-TB | lineage4.2.1 | None | ERR4797394 | Pre-XDR-TB | lineage4.8 | in | ERR4831097 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153597 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972211 | MDR-TB | lineage2.2.1 | None | ERR11773712 | HR-TB | lineage4.8 | None | SRR28394184 | MDR-TB | lineage4.1.2.1 | None | SRR2100721 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR067714 | MDR-TB | lineage2.2.1 | ru | ERR229971 | MDR-TB | lineage2.2.1 | ru | ERR2514666 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR11082648 | Pre-XDR-TB | lineage2.2.1 | None | SRR998766 | MDR-TB | lineage4.1.3 | None | SRR29093683 | MDR-TB | lineage4.3.4.2.1 | None | SRR28435001 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043659 | MDR-TB | lineage4.3.3 | None | ERR5864471 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864468 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802167 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR23310969 | Pre-XDR-TB | lineage4.2.1 | None | SRR25207396 | RR-TB | lineage2.2.1 | None | SRR998765 | MDR-TB | lineage4.1.3 | None | SRR14782743 | Pre-XDR-TB | lineage2.2.1 | None | ERR387052 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR998764 | HR-TB | lineage4.1.3 | None | SRR29539640 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040394 | MDR-TB | lineage2.2.1 | None | SRR29539761 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR11068937 | MDR-TB | lineage3.1.2.1 | None | ERR8665768 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755708 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827871 | XDR-TB | lineage2.2.1 | None | ERR2510317 | MDR-TB | lineage3 | pk | SRR30182413 | HR-TB | lineage1.2.1.2.1 | None | ERR13284709 | MDR-TB | lineage4.3.3 | None | ERR4798618 | Pre-XDR-TB | lineage2.2.1 | in | ERR552534 | MDR-TB | lineage4.1.2.1 | None | ERR13193998 | Pre-XDR-TB | lineage2.2.2 | None | SRR28706679 | MDR-TB | lineage2.2.1 | None | SRR2024918 | Pre-XDR-TB | lineage2.2.1 | cn | ERR11043134 | MDR-TB | lineage4.7 | None | ERR10680121 | MDR-TB | lineage4.1.2.1 | None | SRR11662505 | MDR-TB | lineage2.2.1 | None | SRR6824482 | Pre-XDR-TB | lineage2.2.2 | cn | ERR7362026 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040270 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865668 | MDR-TB | lineage2.2.1 | None | SRR13232711 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040296 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276406 | MDR-TB | lineage4.3.4.2 | None | ERR5864473 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864472 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539260 | Pre-XDR-TB | lineage2.2.1 | None | ERR11080829 | MDR-TB | lineage4.3.4.2 | None | SRR24255990 | Pre-XDR-TB | lineage2.2.1 | None |
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