lineage | Count |
---|---|
lineage4.6.1.2 | 89 |
lineage2.2.1 | 22 |
lineage4.9 | 1 |
lineage4.3.4.2 | 2 |
lineage4.2.1.1 | 8 |
lineage1.2.1.2.1 | 4 |
lineage4.3.4.2.1;lineage4.6.1.2 | 1 |
lineage4.3 | 1 |
lineage4.3.4.2.1 | 2 |
lineage4.2.1.1;lineage4.3.3 | 1 |
lineage4.2.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.6.1.1;lineage4.6.1.2 | 1 |
lineage2.2.1.1 | 1 |
lineage1.1.2 | 1 |
lineage4.6.2.2 | 1 |
spoligotype | Count |
---|---|
None | 137 |
ID | Drug resistance | Lineage | Country iso2 | ERR6359118 | MDR-TB | lineage4.6.1.2 | None | ERR11069086 | MDR-TB | lineage4.6.1.2 | None | ERR6358917 | MDR-TB | lineage4.6.1.2 | None | ERR6359051 | MDR-TB | lineage4.6.1.2 | None | SRR28393337 | MDR-TB | lineage4.6.1.2 | None | ERR6358726 | MDR-TB | lineage4.6.1.2 | None | ERR6358785 | MDR-TB | lineage4.6.1.2 | None | ERR6358911 | MDR-TB | lineage4.6.1.2 | None | ERR6358995 | MDR-TB | lineage4.6.1.2 | None | ERR8665961 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516232 | MDR-TB | lineage4.6.1.2 | be | SRR8791248 | MDR-TB | lineage4.9 | None | ERR6358807 | MDR-TB | lineage4.6.1.2 | None | ERR4830606 | Pre-XDR-TB | lineage2.2.1 | tm | ERR6358806 | MDR-TB | lineage4.6.1.2 | None | ERR3639811 | MDR-TB | lineage4.3.4.2 | None | ERR6358882 | MDR-TB | lineage4.6.1.2 | None | ERR6358903 | MDR-TB | lineage4.6.1.2 | None | ERR6358823 | MDR-TB | lineage4.6.1.2 | None | ERR6358935 | MDR-TB | lineage4.6.1.2 | None | SRR23340068 | MDR-TB | lineage4.2.1.1 | None | ERR6358913 | MDR-TB | lineage4.6.1.2 | None | ERR6358881 | MDR-TB | lineage4.6.1.2 | None | ERR6358828 | MDR-TB | lineage4.6.1.2 | None | ERR6358937 | MDR-TB | lineage4.6.1.2 | None | SRR25207110 | XDR-TB | lineage2.2.1 | None | ERR6358716 | MDR-TB | lineage4.6.1.2 | None | ERR6358754 | MDR-TB | lineage4.6.1.2 | None | ERR6358793 | MDR-TB | lineage4.6.1.2 | None | ERR6359020 | MDR-TB | lineage4.6.1.2 | None | DRR130067 | MDR-TB | lineage1.2.1.2.1 | None | ERR2124078 | MDR-TB | lineage4.6.1.2 | None | ERR6359090 | MDR-TB | lineage4.6.1.2 | None | SRR20632796 | MDR-TB | lineage2.2.1 | None | ERR3132267 | MDR-TB | lineage4.6.1.2 | None | ERR6358907 | MDR-TB | lineage4.6.1.2 | None | ERR6358737 | MDR-TB | lineage4.6.1.2 | None | SRR13232667 | Pre-XDR-TB | lineage2.2.1 | None | SRR17657923 | MDR-TB | lineage4.6.1.2 | None | ERR5917752 | MDR-TB | lineage4.2.1.1 | by | SRR10305970 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358713 | MDR-TB | lineage4.6.1.2 | None | ERR6358809 | MDR-TB | lineage4.6.1.2 | None | ERR6358925 | MDR-TB | lineage4.6.1.2 | None | ERR6358771 | MDR-TB | lineage4.6.1.2 | None | ERR6358747 | RR-TB | lineage4.3.4.2.1;lineage4.6.1.2 | None | ERR6358912 | MDR-TB | lineage4.6.1.2 | None | ERR8665965 | MDR-TB | lineage4.2.1.1 | None | ERR6358820 | MDR-TB | lineage4.6.1.2 | None | ERR1034672 | MDR-TB | lineage4.3 | co | ERR6359052 | MDR-TB | lineage4.6.1.2 | None | ERR6359080 | MDR-TB | lineage4.3.4.2.1 | None | ERR2124079 | MDR-TB | lineage4.6.1.2 | None | ERR13254231 | MDR-TB | lineage1.2.1.2.1 | None | ERR8665728 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665966 | MDR-TB | lineage4.2.1.1 | None | ERR2516249 | MDR-TB | lineage2.2.1 | be | SRR13232729 | MDR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR6359078 | MDR-TB | lineage4.6.1.2 | None | ERR6358752 | MDR-TB | lineage4.6.1.2 | None | ERR6359004 | MDR-TB | lineage4.6.1.2 | None | ERR6358805 | MDR-TB | lineage4.6.1.2 | None | ERR6358928 | MDR-TB | lineage4.6.1.2 | None | ERR6358817 | MDR-TB | lineage4.6.1.2 | None | SRR17657944 | MDR-TB | lineage4.6.1.2 | None | ERR6359128 | MDR-TB | lineage4.6.1.2 | None | ERR6358794 | MDR-TB | lineage4.6.1.2 | None | ERR2307776 | MDR-TB | lineage2.2.1 | None | SRR7653026 | HR-TB | lineage4.2.1 | None | ERR8665960 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358956 | MDR-TB | lineage4.6.1.2 | None | SRR19612245 | MDR-TB | lineage2.2.1 | None | ERR6358796 | MDR-TB | lineage4.6.1.2 | None | SRR13180326 | MDR-TB | lineage4.6.1.2 | None | SRR13232670 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358736 | MDR-TB | lineage4.6.1.2 | None | ERR6358767 | MDR-TB | lineage4.6.1.2 | None | ERR2516811 | MDR-TB | lineage4.2.1.1 | gb | ERR6358733 | MDR-TB | lineage4.6.1.2 | None | ERR6358957 | MDR-TB | lineage4.6.1.2 | None | SRR1723803 | Pre-XDR-TB | lineage2.2.1 | cn | ERR6358929 | MDR-TB | lineage4.6.1.2 | None | ERR6358967 | MDR-TB | lineage4.6.1.2 | None | ERR8665536 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358934 | MDR-TB | lineage4.6.1.2 | None | ERR6359125 | MDR-TB | lineage4.6.1.2 | None | ERR6358746 | MDR-TB | lineage4.6.1.2 | None | ERR6359054 | MDR-TB | lineage4.6.1.2 | None | ERR3132086 | MDR-TB | lineage4.6.1.2 | None | SRR23340066 | MDR-TB | lineage4.2.1.1 | None | ERR6359012 | MDR-TB | lineage4.6.1.2 | None | SRR22528566 | MDR-TB | lineage4.1.2.1 | None | ERR4810623 | Pre-XDR-TB | lineage2.2.1 | cn | ERR6359089 | MDR-TB | lineage4.6.1.2 | None | ERR6358915 | MDR-TB | lineage4.6.1.2 | None | ERR6358920 | MDR-TB | lineage4.6.1.2 | None | ERR6359022 | MDR-TB | lineage4.6.1.2 | None | ERR6358804 | MDR-TB | lineage4.6.1.2 | None | ERR6358798 | MDR-TB | lineage4.6.1.2 | None | SRR6824483 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2516720 | MDR-TB | lineage4.6.1.2 | nl | ERR6358757 | MDR-TB | lineage4.6.1.2 | None | SRR28393340 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR6358779 | MDR-TB | lineage4.6.1.2 | None | ERR6358945 | MDR-TB | lineage4.6.1.2 | None | ERR6359095 | MDR-TB | lineage4.6.1.2 | None | ERR6358996 | MDR-TB | lineage4.6.1.2 | None | ERR4810622 | XDR-TB | lineage2.2.1 | cn | ERR13254252 | MDR-TB | lineage1.2.1.2.1 | None | ERR8665729 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068809 | MDR-TB | lineage4.3.4.2.1 | None | ERR040131 | MDR-TB | lineage4.6.1.2 | ug | ERR6358904 | MDR-TB | lineage4.6.1.2 | None | ERR6358939 | MDR-TB | lineage4.6.1.2 | None | SRR23340060 | MDR-TB | lineage4.2.1.1 | None | SRR25207109 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358749 | MDR-TB | lineage4.6.1.1;lineage4.6.1.2 | None | ERR6358906 | MDR-TB | lineage4.6.1.2 | None | ERR11080926 | MDR-TB | lineage4.3.4.2 | None | ERR6358732 | MDR-TB | lineage4.6.1.2 | None | ERR6358765 | MDR-TB | lineage4.6.1.2 | None | ERR6358774 | MDR-TB | lineage4.6.1.2 | None | ERR6359117 | MDR-TB | lineage4.6.1.2 | None | SRR2024947 | Pre-XDR-TB | lineage2.2.1 | cn | ERR6358946 | MDR-TB | lineage4.6.1.2 | None | SRR13232592 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359063 | MDR-TB | lineage4.6.1.2 | None | ERR11080875 | MDR-TB | lineage4.2.1.1 | None | SRR13232669 | Pre-XDR-TB | lineage2.2.1 | None | ERR3132255 | MDR-TB | lineage4.6.1.2 | None | SRR12416823 | MDR-TB | lineage2.2.1.1 | None | ERR6358761 | MDR-TB | lineage4.6.1.2 | None | ERR7362045 | MDR-TB | lineage4.6.1.2 | None | ERR3132089 | MDR-TB | lineage4.6.1.2 | None | ERR4822367 | MDR-TB | lineage1.2.1.2.1 | None | ERR2516786 | MDR-TB | lineage1.1.2 | gb | ERR4829996 | MDR-TB | lineage4.6.2.2 | None |
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