lineage | Count |
---|---|
lineage4.1.2.1 | 4 |
lineage2.2.1 | 34 |
lineage4.3.4.2 | 19 |
lineage4.2.2.2 | 45 |
lineage4.2.2.1 | 11 |
lineage1.2.2.2 | 3 |
lineage4.1.1.3 | 1 |
La3 | 3 |
lineage2.2.2 | 5 |
lineage4.3.4.1 | 3 |
lineage4.2.2.2;lineage4.8 | 1 |
lineage1.1.2 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage3 | 2 |
spoligotype | Count |
---|---|
None | 133 |
ID | Drug resistance | Lineage | Country iso2 | SRR19304003 | Other | lineage4.1.2.1 | None | ERR027446 | MDR-TB | lineage2.2.1 | ru | ERR2516731 | MDR-TB | lineage4.3.4.2 | pe | ERR3275727 | MDR-TB | lineage4.2.2.2 | nl | ERR4829102 | Pre-XDR-TB | lineage4.2.2.2 | dj | ERR11082442 | MDR-TB | lineage4.2.2.1 | None | ERR11043078 | MDR-TB | lineage4.2.2.1 | None | ERR3287432 | Pre-XDR-TB | lineage4.3.4.2 | pe | SRR1166925 | MDR-TB | lineage4.2.2.2 | None | ERR6397213 | MDR-TB | lineage4.2.2.2 | None | SRR5341361 | Pre-XDR-TB | lineage1.2.2.2 | in | ERR3287847 | MDR-TB | lineage4.3.4.2 | pe | SRR25207260 | MDR-TB | lineage2.2.1 | None | ERR1023412 | MDR-TB | lineage4.2.2.2 | None | ERR3794497 | MDR-TB | lineage2.2.1 | None | SRR1162986 | MDR-TB | lineage4.2.2.2 | None | ERR2307768 | HR-TB | lineage2.2.1 | None | ERR7737647 | MDR-TB | lineage4.2.2.2 | None | ERR3275716 | MDR-TB | lineage4.2.2.2 | nl | ERR4813122 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR9992663 | XDR-TB | lineage4.1.1.3 | None | ERR019856 | Other | La3 | None | SRR3082077 | MDR-TB | lineage4.2.2.1 | None | SRR1049044 | Pre-XDR-TB | lineage2.2.2 | None | SRR1162796 | MDR-TB | lineage4.2.2.2 | None | SRR1162968 | MDR-TB | lineage4.2.2.2 | None | ERR9907793 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4800543 | MDR-TB | lineage1.2.2.2 | in | ERR4821658 | Other | La3 | None | SRR14802032 | HR-TB | lineage2.2.1 | None | SRR16088563 | XDR-TB | lineage2.2.1 | None | SRR19303803 | Other | lineage4.1.2.1 | None | ERR4830824 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR11069133 | MDR-TB | lineage2.2.1 | None | ERR2516491 | Pre-XDR-TB | lineage4.3.4.2 | pe | SRR1163128 | MDR-TB | lineage4.2.2.2 | None | ERR4821159 | MDR-TB | lineage4.2.2.1 | gb | ERR3275385 | MDR-TB | lineage4.2.2.2 | nl | ERR3639795 | Pre-XDR-TB | lineage2.2.1 | None | SRR1146330 | MDR-TB | lineage4.2.2.2 | None | ERR5865681 | Pre-XDR-TB | lineage2.2.1 | None | SRR1144814 | MDR-TB | lineage4.2.2.2 | None | SRR6458407 | MDR-TB | lineage2.2.1 | None | SRR833096 | MDR-TB | lineage2.2.1 | None | SRR1146301 | MDR-TB | lineage4.2.2.2 | None | SRR1144785 | MDR-TB | lineage4.2.2.2 | None | ERR10680223 | MDR-TB | lineage2.2.1 | None | ERR4829097 | MDR-TB | lineage4.2.2.1 | dj | ERR5865682 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818892 | MDR-TB | lineage4.2.2.1 | None | ERR9907762 | MDR-TB | lineage4.3.4.1 | None | ERR3794505 | Pre-XDR-TB | lineage2.2.1 | None | SRR28394059 | MDR-TB | lineage4.3.4.2 | None | SRR28394035 | MDR-TB | lineage4.3.4.2 | None | SRR7131017 | MDR-TB | lineage2.2.1 | None | ERR017782 | Other | La3 | None | ERR12117900 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR1146293 | MDR-TB | lineage4.2.2.2 | None | ERR4819868 | MDR-TB | lineage4.2.2.1 | gb | SRR26937103 | MDR-TB | lineage2.2.1 | None | SRR19276638 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4810613 | MDR-TB | lineage2.2.1 | cn | ERR7737819 | MDR-TB | lineage4.2.2.2 | None | SAMN02360603 | Pre-XDR-TB | lineage2.2.2 | kr | SRR5818580 | MDR-TB | lineage4.2.2.1 | dj | SRR6257056 | MDR-TB | lineage2.2.1 | None | SRR25515243 | MDR-TB | lineage2.2.1 | None | ERR3287456 | MDR-TB | lineage4.3.4.2 | pe | ERR133844 | MDR-TB | lineage2.2.1 | ru | ERR4817015 | MDR-TB | lineage4.2.2.1 | None | SRR1163179 | MDR-TB | lineage4.2.2.2 | None | SAMN02053752 | MDR-TB | lineage2.2.1 | za | ERR2446468 | MDR-TB | lineage4.2.2.2 | nl | SRR24255899 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737871 | MDR-TB | lineage4.2.2.2 | None | SRR21689464 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR1144808 | MDR-TB | lineage4.2.2.2 | None | SRR1013649 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02414873 | MDR-TB | lineage4.2.2.2 | se | SAMN02414876 | MDR-TB | lineage4.2.2.2 | se | SRR1144784 | MDR-TB | lineage4.2.2.2 | None | ERR4011960 | MDR-TB | lineage4.2.2.2 | None | SRR1162879 | MDR-TB | lineage4.2.2.2 | None | SRR5341409 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR24709995 | MDR-TB | lineage2.2.1 | None | ERR7737675 | MDR-TB | lineage4.2.2.2 | None | ERR3287800 | MDR-TB | lineage4.3.4.2 | pe | SRR1146289 | MDR-TB | lineage4.2.2.2 | None | ERR3287693 | MDR-TB | lineage4.3.4.2 | pe | SRR21690946 | MDR-TB | lineage4.2.2.2 | None | SAMN02414896 | MDR-TB | lineage4.2.2.2 | se | SRR1013648 | Pre-XDR-TB | lineage2.2.2 | None | ERR4829837 | MDR-TB | lineage2.2.1 | it | ERR4830826 | HR-TB | lineage4.2.2.2;lineage4.8 | et | SRR25207111 | MDR-TB | lineage2.2.1 | None | SRR28394185 | MDR-TB | lineage4.3.4.2 | None | SRR28706644 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706386 | MDR-TB | lineage2.2.1 | None | SRR28394236 | MDR-TB | lineage4.3.4.2 | None | ERR2510266 | MDR-TB | lineage1.1.2 | pk | SRR1163093 | MDR-TB | lineage4.2.2.2 | None | SRR22048482 | Other | lineage4.1.2.1 | None | SRR1162874 | MDR-TB | lineage4.2.2.2 | None | SRR1146309 | MDR-TB | lineage4.2.2.2 | None | ERR4822270 | MDR-TB | lineage4.2.2.1 | None | SRR833061 | MDR-TB | lineage2.2.1 | None | SRR8335248 | MDR-TB | lineage2.2.1 | None | ERR11043052 | MDR-TB | lineage2.2.1;lineage4 | None | ERR4830804 | MDR-TB | lineage4.2.2.1 | et | ERR3287851 | MDR-TB | lineage4.3.4.2 | pe | ERR2517379 | MDR-TB | lineage4.2.2.2 | nl | SRR671794 | Pre-XDR-TB | lineage2.2.1 | cn | SRR16088585 | MDR-TB | lineage2.2.1 | None | ERR11067246 | MDR-TB | lineage4.2.2.2 | None | SRR1049045 | Pre-XDR-TB | lineage2.2.2 | None | SRR19276643 | Pre-XDR-TB | lineage4.3.4.2 | None | SAMN02414930 | MDR-TB | lineage4.2.2.2 | se | ERR11049861 | Other | lineage3 | None | ERR4828954 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4797263 | MDR-TB | lineage3 | in | SRR1163085 | MDR-TB | lineage4.2.2.2 | None | SRR24256143 | MDR-TB | lineage2.2.1 | None | SRR1163014 | MDR-TB | lineage4.2.2.2 | None | SRR1144760 | MDR-TB | lineage4.2.2.2 | None | SRR1163123 | MDR-TB | lineage4.2.2.2 | None | SAMN02414887 | MDR-TB | lineage4.2.2.2 | se | SRR1144833 | MDR-TB | lineage4.2.2.2 | None | ERR9907792 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR24710197 | MDR-TB | lineage2.2.1 | None | ERR2516497 | MDR-TB | lineage4.3.4.2 | pe | SRR6824363 | RR-TB | lineage2.2.1 | cn | ERR751476 | MDR-TB | lineage4.3.4.2 | pe | SRR28393268 | MDR-TB | lineage4.3.4.2 | None |
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