lineage | Count |
---|---|
lineage4.3 | 1 |
lineage2.2.1 | 35 |
lineage4.4.1.1.1 | 22 |
lineage4.4.1.1 | 3 |
lineage2.2.1.1 | 1 |
lineage4.2.1 | 5 |
lineage3.1.2.1 | 3 |
lineage4.2.1;lineage2.2.1 | 1 |
lineage4;lineage2.2 | 1 |
lineage4.1.2.1 | 1 |
lineage4.4 | 1 |
spoligotype | Count |
---|---|
None | 74 |
ID | Drug resistance | Lineage | Country iso2 | ERR4797019 | Pre-XDR-TB | lineage4.3 | in | ERR5864821 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911202 | MDR-TB | lineage4.4.1.1.1 | za | ERR5864820 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864819 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737639 | MDR-TB | lineage2.2.1 | None | ERR7737723 | MDR-TB | lineage4.4.1.1.1 | None | ERR5864822 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737793 | MDR-TB | lineage2.2.1 | None | ERR7911201 | MDR-TB | lineage4.4.1.1.1 | za | ERR7911298 | Pre-XDR-TB | lineage2.2.1 | vn | ERR7911317 | Pre-XDR-TB | lineage2.2.1 | vn | ERR7911441 | MDR-TB | lineage4.4.1.1.1 | za | ERR7911282 | MDR-TB | lineage2.2.1 | vn | ERR7911471 | MDR-TB | lineage2.2.1 | vn | SRR1019141 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9992613 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR7737804 | MDR-TB | lineage4.4.1.1.1 | None | ERR9119255 | MDR-TB | lineage2.2.1 | None | ERR9125303 | MDR-TB | lineage2.2.1 | None | ERR9634268 | HR-TB | lineage2.2.1.1 | None | SRR10315713 | MDR-TB | lineage4.4.1.1.1 | None | SRR10306031 | MDR-TB | lineage2.2.1 | None | SRR10315711 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315714 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315715 | MDR-TB | lineage4.4.1.1.1 | None | SRR10380057 | Pre-XDR-TB | lineage4.2.1 | None | SRR11349174 | MDR-TB | lineage4.4.1.1.1 | None | SRR1049574 | MDR-TB | lineage3.1.2.1 | None | SRR1049573 | MDR-TB | lineage3.1.2.1 | None | SRR11342645 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342697 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349200 | MDR-TB | lineage4.4.1.1.1 | None | SRR1140936 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR10610066 | MDR-TB | lineage4.4.1.1 | None | SRR16058291 | MDR-TB | lineage2.2.1 | None | SRR16156690 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156732 | MDR-TB | lineage2.2.1 | None | ERR9806761 | MDR-TB | lineage4.4.1.1 | None | SRR13232421 | MDR-TB | lineage2.2.1 | None | SRR14782507 | XDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR16156692 | Pre-XDR-TB | lineage2.2.1 | None | SRR5065595 | MDR-TB | lineage2.2.1 | vn | SRR3743498 | Pre-XDR-TB | lineage4.2.1 | None | SAMN02380987 | MDR-TB | lineage3.1.2.1 | ug | SRR5065526 | MDR-TB | lineage2.2.1 | vn | SRR5067289 | MDR-TB | lineage2.2.1 | vn | ERR4832024 | MDR-TB | lineage2.2.1 | vn | SRR5152903 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723663 | MDR-TB | lineage2.2.1 | cn | SAMN02350479 | Pre-XDR-TB | lineage4.4.1.1.1 | za | ERR4830478 | MDR-TB | lineage4.4.1.1.1 | None | ERR4830495 | MDR-TB | lineage4.4.1.1.1 | None | ERR4830373 | MDR-TB | lineage2.2.1 | vn | ERR4832006 | MDR-TB | lineage2.2.1 | vn | SRR6807718 | Pre-XDR-TB | lineage4.2.1 | None | ERR4831792 | MDR-TB | lineage4;lineage2.2 | None | ERR4831812 | MDR-TB | lineage2.2.1 | vn | ERR4831824 | MDR-TB | lineage2.2.1 | vn | ERR4832034 | MDR-TB | lineage2.2.1 | vn | ERR4831659 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872299 | Pre-XDR-TB | lineage4.2.1 | None | ERR4831781 | MDR-TB | lineage2.2.1 | vn | ERR4831807 | MDR-TB | lineage2.2.1 | vn | SRR6824652 | MDR-TB | lineage2.2.1 | cn | SRR6855815 | MDR-TB | lineage4.4.1.1.1 | None | ERR1035103 | Pre-XDR-TB | lineage2.2.1 | vn | SRR8217902 | MDR-TB | lineage2.2.1 | None | SRR9971312 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971003 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971049 | MDR-TB | lineage4.4.1.1.1 | None | SRR7592348 | MDR-TB | lineage4.1.2.1 | None | ERR10762431 | Pre-XDR-TB | lineage4.2.1 | None | ERR4796259 | MDR-TB | lineage4.4 | in |
---|