Rv2043c - p.Phe58Ser
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
73 MDR-TB
23 Pre-XDR-TB
5 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 48 |
| lineage4.4.1.1.1 | 28 |
| lineage4.1.2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage4.4 | 1 |
| lineage4.2.1 | 9 |
| lineage2.2.1.1 | 2 |
| lineage3.1.2.1 | 3 |
| lineage2.2.2 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2.1;lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 102 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8217902 | MDR-TB | lineage2.2.1 | None | SRR26937056 | MDR-TB | lineage2.2.1 | None | SRR11349174 | MDR-TB | lineage4.4.1.1.1 | None | SRR22251209 | MDR-TB | lineage2.2.1 | None | SRR7592348 | MDR-TB | lineage4.1.2.1 | None | SRR9971049 | MDR-TB | lineage4.4.1.1.1 | None | ERR7737804 | MDR-TB | lineage4.4.1.1.1 | None | ERR4797019 | Pre-XDR-TB | lineage4.3 | in | SRR1019141 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR29096579 | MDR-TB | lineage4.3.4.2.1 | None | ERR4796259 | MDR-TB | lineage4.4 | in | ERR4832034 | MDR-TB | lineage2.2.1 | vn | ERR4832024 | MDR-TB | lineage2.2.1 | vn | ERR4832006 | MDR-TB | lineage2.2.1 | vn | ERR7911282 | MDR-TB | lineage2.2.1 | vn | ERR7911298 | Pre-XDR-TB | lineage2.2.1 | vn | ERR7911317 | Pre-XDR-TB | lineage2.2.1 | vn | ERR7911471 | MDR-TB | lineage2.2.1 | vn | ERR7911201 | MDR-TB | lineage4.4.1.1.1 | za | ERR7911202 | MDR-TB | lineage4.4.1.1.1 | za | ERR4831824 | MDR-TB | lineage2.2.1 | vn | ERR4830373 | MDR-TB | lineage2.2.1 | vn | ERR11488990 | MDR-TB | lineage4.4.1.1.1 | None | SRR26399749 | MDR-TB | lineage2.2.1 | None | SRR10315711 | MDR-TB | lineage4.4.1.1.1 | None | ERR5864822 | Pre-XDR-TB | lineage2.2.1 | None | SRR6807718 | Pre-XDR-TB | lineage4.2.1 | None | SRR26937072 | MDR-TB | lineage2.2.1 | None | ERR5864821 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289258 | MDR-TB | lineage4.4.1.1.1 | None | SRR16156690 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125303 | MDR-TB | lineage2.2.1 | None | DRR261034 | MDR-TB | lineage2.2.1 | None | SRR10315713 | MDR-TB | lineage4.4.1.1.1 | None | SRR29093332 | MDR-TB | lineage4.3.4.2.1 | None | SRR29094037 | MDR-TB | lineage4.3.4.2.1 | None | ERR9634268 | HR-TB | lineage2.2.1.1 | None | SRR11342645 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315715 | MDR-TB | lineage4.4.1.1.1 | None | ERR5864819 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971312 | MDR-TB | lineage4.4.1.1.1 | None | SRR3743498 | Pre-XDR-TB | lineage4.2.1 | None | SRR26400079 | MDR-TB | lineage2.2.1 | None | SRR26937141 | MDR-TB | lineage2.2.1 | None | SAMN02350479 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SRR6855815 | MDR-TB | lineage4.4.1.1.1 | None | SRR29094035 | MDR-TB | lineage4.3.4.2.1 | None | SAMN02380987 | MDR-TB | lineage3.1.2.1 | ug | ERR13195565 | MDR-TB | lineage2.2.2 | None | ERR10762431 | Pre-XDR-TB | lineage4.2.1 | None | ERR7911441 | MDR-TB | lineage4.4.1.1.1 | za | ERR4831807 | MDR-TB | lineage2.2.1 | vn | SRR26936992 | MDR-TB | lineage2.2.1 | None | SRR11342697 | MDR-TB | lineage4.4.1.1.1 | None | SRR6824652 | MDR-TB | lineage2.2.1 | cn | SRR16156692 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971003 | MDR-TB | lineage4.4.1.1.1 | None | ERR7737639 | MDR-TB | lineage2.2.1 | None | SRR5065595 | MDR-TB | lineage2.2.1 | vn | SRR5067289 | MDR-TB | lineage2.2.1 | vn | SRR1049573 | MDR-TB | lineage3.1.2.1 | None | SRR10380057 | Pre-XDR-TB | lineage4.2.1 | None | SRR16058291 | MDR-TB | lineage2.2.1 | None | ERR4831792 | MDR-TB | lineage2.2;lineage4 | None | SRR26937146 | MDR-TB | lineage2.2.1 | None | ERR5864820 | Pre-XDR-TB | lineage2.2.1 | None | SRR26937061 | MDR-TB | lineage2.2.1 | None | ERR9992613 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR4830495 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349200 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR29385275 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772572 | MDR-TB | lineage3.1.2 | None | ERR9119255 | MDR-TB | lineage2.2.1 | None | SRR13232421 | MDR-TB | lineage2.2.1 | None | SRR1049574 | MDR-TB | lineage3.1.2.1 | None | SRR29385259 | MDR-TB | lineage2.2.1.1 | None | SRR26937047 | Pre-XDR-TB | lineage2.2.1 | None | ERR13288981 | MDR-TB | lineage4.4.1.1.1 | None | ERR7737793 | MDR-TB | lineage2.2.1 | None | SRR28351634 | XDR-TB | lineage4.2.1 | None | SRR1140936 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR28498697 | XDR-TB | lineage4.2.1 | None | ERR4831659 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831781 | MDR-TB | lineage2.2.1 | vn | ERR4831812 | MDR-TB | lineage2.2.1 | vn | SRR26399575 | MDR-TB | lineage2.2.1 | None | SRR14782507 | XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR1035103 | Pre-XDR-TB | lineage2.2.1 | vn | SRR5065526 | MDR-TB | lineage2.2.1 | vn | SRR16156732 | MDR-TB | lineage2.2.1 | None | SRR10315714 | MDR-TB | lineage4.4.1.1.1 | None | ERR4830478 | MDR-TB | lineage4.4.1.1.1 | None | SRR10306031 | MDR-TB | lineage2.2.1 | None | SRR5152903 | Pre-XDR-TB | lineage2.2.1 | None | SRR29094013 | MDR-TB | lineage4.3.4.2.1 | None | SRR1723663 | MDR-TB | lineage2.2.1 | cn | SRR28498452 | XDR-TB | lineage4.2.1 | None | ERR4872299 | XDR-TB | lineage4.2.1 | None | ERR13285813 | Pre-XDR-TB | lineage4.2.1 | None | ERR7737723 | MDR-TB | lineage4.4.1.1.1 | None |
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