lineage | Count |
---|---|
lineage4.3.3 | 11 |
lineage4;lineage2.2.1 | 1 |
lineage3 | 3 |
lineage4.1.1 | 1 |
lineage2.2.1 | 14 |
lineage4.2.1 | 1 |
lineage2.2.1;lineage2.1 | 1 |
lineage4.1.2.1 | 4 |
lineage4.9 | 1 |
lineage4.6.2.2 | 2 |
lineage4.1.1.3 | 2 |
lineage3.1.2 | 4 |
lineage2.2.1.1 | 1 |
lineage2.2.1.2 | 3 |
lineage1.2.2.2 | 1 |
lineage4.4.2 | 2 |
lineage3.1 | 1 |
lineage1.2.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 54 |
ID | Drug resistance | Lineage | Country iso2 | ERR137209 | MDR-TB | lineage4.3.3 | ru | SRR5341196 | Pre-XDR-TB | lineage4;lineage2.2.1 | None | ERR2510530 | Pre-XDR-TB | lineage3 | pk | ERR2515506 | MDR-TB | lineage4.3.3 | za | ERR2516686 | MDR-TB | lineage4.1.1 | pe | ERR2515936 | MDR-TB | lineage4.3.3 | za | SRR5341316 | XDR-TB | lineage2.2.1 | in | SRR5341353 | XDR-TB | lineage2.2.1 | in | SRR23340136 | MDR-TB | lineage4.2.1 | None | ERR4829754 | HR-TB | lineage4.3.3 | None | ERR4828111 | MDR-TB | lineage2.2.1 | None | SRR921502 | Pre-XDR-TB | lineage2.2.1;lineage2.1 | None | SRR6832216 | MDR-TB | lineage2.2.1 | None | SRR6832827 | MDR-TB | lineage2.2.1 | None | ERR4831525 | Pre-XDR-TB | lineage3 | pk | SRR671842 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1034681 | MDR-TB | lineage4.1.2.1 | co | ERR4553791 | MDR-TB | lineage4.9 | None | ERR133896 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4423480 | Pre-XDR-TB | lineage4.6.2.2 | None | ERR1034714 | MDR-TB | lineage4.1.1.3 | pe | ERR4195285 | MDR-TB | lineage4.1.2.1 | None | ERR4798989 | MDR-TB | lineage3.1.2 | in | ERR4796385 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798462 | MDR-TB | lineage3.1.2 | in | ERR4798802 | MDR-TB | lineage3.1.2 | in | ERR4799502 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800256 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4799729 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4799828 | MDR-TB | lineage3.1.2 | in | ERR4800061 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4800648 | Other | lineage1.2.2.2 | None | ERR4809238 | MDR-TB | lineage4.3.3 | za | ERR5918144 | MDR-TB | lineage4.3.3 | za | ERR5865797 | MDR-TB | lineage4.3.3 | None | ERR5918143 | MDR-TB | lineage4.3.3 | za | ERR5865798 | MDR-TB | lineage4.3.3 | None | SRR13232430 | MDR-TB | lineage2.2.1 | None | ERR6879016 | MDR-TB | lineage4.1.1.3 | None | ERR7975679 | MDR-TB | lineage4.1.2.1 | None | ERR8774245 | Pre-XDR-TB | lineage4.6.2.2 | None | ERR11067646 | MDR-TB | lineage4.3.3 | None | ERR7975658 | MDR-TB | lineage4.1.2.1 | None | ERR987708 | MDR-TB | lineage3 | None | SRR13180208 | XDR-TB | lineage2.2.1 | None | SRR13232433 | MDR-TB | lineage2.2.1 | None | SRR15316342 | MDR-TB | lineage4.4.2 | None | SRR15014614 | MDR-TB | lineage3.1 | None | SRR13232596 | MDR-TB | lineage2.2.1 | None | ERR11068288 | MDR-TB | lineage2.2.1 | None | SRR15316361 | MDR-TB | lineage4.4.2 | None | ERR11068518 | MDR-TB | lineage2.2.1 | None | ERR11069061 | MDR-TB | lineage1.2.1.2.1 | None | ERR11083019 | MDR-TB | lineage4.3.3 | None |
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