lineage | Count |
---|---|
lineage2.2.1 | 92 |
lineage2.2.1.1 | 10 |
lineage2.2.1;lineage4.1.2.1 | 1 |
lineage4.1.2 | 1 |
lineage4.3.4.2 | 10 |
lineage2.2.2 | 12 |
lineage4.4.2 | 5 |
lineage1.2.2.2 | 4 |
lineage4.3.3 | 4 |
lineage4.2.2.1 | 2 |
lineage5.2 | 2 |
lineage3 | 3 |
lineage4.1.2.1 | 5 |
lineage1.2.1.2.1 | 1 |
lineage2.2.1;lineage2.2.2 | 1 |
lineage4.2.1.1 | 1 |
lineage4.9 | 1 |
lineage4.2.2 | 1 |
lineage4.3.2 | 1 |
lineage4.4 | 1 |
spoligotype | Count |
---|---|
None | 158 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
DRR130102 | MDR-TB | lineage2.2.1 | None |
SRR11662332 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR9806664 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4822385 | Pre-XDR-TB | lineage2.2.1 | kg |
SRR1173211 | Pre-XDR-TB | lineage2.2.1 | None |
SRR11871446 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1723471 | MDR-TB | lineage2.2.1 | None |
ERR108423 | HR-TB | lineage2.2.1 | ru |
ERR5866136 | MDR-TB | lineage2.2.1 | None |
ERR9806609 | MDR-TB | lineage2.2.1 | None |
SRR6824628 | MDR-TB | lineage2.2.1 | cn |
ERR9806615 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10397194 | MDR-TB | lineage2.2.1 | None |
ERR2307712 | Pre-XDR-TB | lineage2.2.1 | None |
ERR1353079 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4863405 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None |
ERR5865439 | MDR-TB | lineage2.2.1 | None |
ERR4830743 | Pre-XDR-TB | lineage4.1.2 | dz |
ERR4822561 | Pre-XDR-TB | lineage2.2.1 | tm |
ERR13285129 | Pre-XDR-TB | lineage4.3.4.2 | None |
SRR1049058 | Pre-XDR-TB | lineage2.2.2 | None |
SRR7516394 | MDR-TB | lineage2.2.1 | None |
SRR29050721 | MDR-TB | lineage4.3.4.2 | None |
ERR7362004 | MDR-TB | lineage2.2.1 | None |
ERR5866351 | MDR-TB | lineage2.2.1 | None |
SAMN02360596 | Pre-XDR-TB | lineage2.2.2 | kr |
ERR13285128 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR551862_ERR551861 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6824546 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR1013566 | Pre-XDR-TB | lineage4.4.2 | None |
SRR5709770 | MDR-TB | lineage2.2.1.1 | th |
SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None |
SRR1181050 | HR-TB | lineage2.2.1 | None |
SAMN02360610 | Pre-XDR-TB | lineage2.2.2 | kr |
SAMEA2534248 | Pre-XDR-TB | lineage2.2.1 | uz |
ERR228050 | MDR-TB | lineage2.2.1 | ru |
SRR11871418 | HR-TB | lineage2.2.1 | None |
SRR12416820 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5866350 | MDR-TB | lineage2.2.1 | None |
ERR8025737 | Pre-XDR-TB | lineage2.2.1 | None |
SRR28351157 | Pre-XDR-TB | lineage1.2.2.2 | None |
ERR10762451 | MDR-TB | lineage2.2.1 | None |
SRR29094451 | MDR-TB | lineage4.3.3 | None |
ERR5866341 | MDR-TB | lineage2.2.1 | None |
ERR4797296 | MDR-TB | lineage1.2.2.2 | in |
ERR9993055 | XDR-TB | lineage2.2.1 | None |
SRR10305965 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1013565 | Pre-XDR-TB | lineage4.4.2 | None |
SRR1013662 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None |
SRR11871412 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None |
SRR11662323 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR11043440 | Pre-XDR-TB | lineage4.3.4.2 | None |
SRR7516393 | MDR-TB | lineage2.2.1 | None |
SRR10040519 | MDR-TB | lineage2.2.1 | None |
ERR13258496 | MDR-TB | lineage2.2.1 | None |
SRR6831746 | MDR-TB | lineage2.2.1 | None |
ERR11043085 | MDR-TB | lineage4.2.2.1 | None |
SRR29231726 | MDR-TB | lineage5.2 | None |
ERR4821961 | Pre-XDR-TB | lineage3 | None |
ERR2307662 | Pre-XDR-TB | lineage2.2.1 | None |
SRR11871420 | Other | lineage2.2.1 | None |
SRR11662389 | MDR-TB | lineage2.2.1.1 | None |
ERR13292541 | MDR-TB | lineage2.2.1 | None |
SRR25207142 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1013663 | Pre-XDR-TB | lineage2.2.2 | None |
SRR11662422 | MDR-TB | lineage2.2.1.1 | None |
SRR16156836 | MDR-TB | lineage2.2.1 | None |
SRR1723472 | MDR-TB | lineage2.2.1 | None |
SRR13583319 | MDR-TB | lineage4.3.4.2 | None |
ERR8025726 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4815470 | Pre-XDR-TB | lineage3 | gb |
ERR13262056 | Pre-XDR-TB | lineage4.1.2.1 | None |
ERR9993185 | XDR-TB | lineage2.2.1 | None |
SRR28393811 | MDR-TB | lineage4.1.2.1 | None |
ERR5865440 | MDR-TB | lineage2.2.1 | None |
SRR8352208 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5866352 | MDR-TB | lineage2.2.1 | None |
SRR28351204 | Pre-XDR-TB | lineage1.2.2.2 | None |
ERR11776038 | MDR-TB | lineage4.3.3 | None |
SRR1165220 | Pre-XDR-TB | lineage2.2.1 | None |
SRR28045931 | Pre-XDR-TB | lineage4.1.2.1 | None |
ERR7911698 | Pre-XDR-TB | lineage2.2.1 | za |
ERR5866134 | MDR-TB | lineage2.2.1 | None |
ERR11043086 | Other | lineage4.2.2.1 | None |
SRR16370559 | Pre-XDR-TB | lineage2.2.1 | None |
SAMN03246234 | MDR-TB | lineage2.2.1 | cn |
ERR2516965 | MDR-TB | lineage2.2.1.1 | gb |
SRR1013632 | Pre-XDR-TB | lineage2.2.2 | None |
SRR10040504 | MDR-TB | lineage2.2.1 | None |
SRR12006567 | MDR-TB | lineage1.2.1.2.1 | None |
SRR6832452 | MDR-TB | lineage2.2.1 | None |
SRR5153602 | MDR-TB | lineage2.2.1 | None |
ERR4796454 | MDR-TB | lineage1.2.2.2 | in |
ERR9806923 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1049029 | Pre-XDR-TB | lineage2.2.2 | None |
SRR25207013 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1173266 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29056307 | MDR-TB | lineage2.2.1 | None |
ERR3794390 | Pre-XDR-TB | lineage2.2.1 | None |
ERR3287591 | MDR-TB | lineage4.1.2.1 | None |
ERR4819954 | Pre-XDR-TB | lineage3 | gb |
SRR1180926 | MDR-TB | lineage2.2.1 | None |
ERR11043443 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR5866135 | MDR-TB | lineage2.2.1 | None |
SRR26937069 | MDR-TB | lineage2.2.1 | None |
ERR13288791 | XDR-TB | lineage2.2.1;lineage2.2.2 | None |
SRR12142317 | MDR-TB | lineage2.2.2 | None |
SRR29093579 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5865438 | MDR-TB | lineage2.2.1 | None |
SRR1013631 | Pre-XDR-TB | lineage2.2.2 | None |
ERR9993163 | XDR-TB | lineage2.2.1 | None |
ERR2307524 | Pre-XDR-TB | lineage2.2.1 | None |
SRR24255946 | MDR-TB | lineage4.2.1.1 | None |
ERR9993060 | XDR-TB | lineage2.2.1 | None |
SRR1723638 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR11662632 | MDR-TB | lineage2.2.1.1 | None |
SRR1167297 | Pre-XDR-TB | lineage2.2.1 | None |
SAMN02403468 | Pre-XDR-TB | lineage2.2.1 | za |
SRR11871444 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10869246 | MDR-TB | lineage2.2.1 | None |
SRR18715472 | MDR-TB | lineage2.2.1 | None |
ERR551861 | Pre-XDR-TB | lineage2.2.1 | None |
ERR551862 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2600522 | MDR-TB | lineage4.3.3 | None |
ERR2307439 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11043442 | Pre-XDR-TB | lineage4.3.4.2 | None |
SRR5485483 | RR-TB | lineage4.9 | None |
ERR2516486 | MDR-TB | lineage4.1.2.1 | pe |
SRR1049028 | Pre-XDR-TB | lineage2.2.2 | None |
ERR4796795 | Pre-XDR-TB | lineage4.2.2 | in |
ERR13195354 | MDR-TB | lineage2.2.2 | None |
SRR1049059 | Pre-XDR-TB | lineage2.2.2 | None |
SRR23862072 | MDR-TB | lineage2.2.1 | None |
SRR28393379 | MDR-TB | lineage4.3.2 | None |
SRR28046141 | Pre-XDR-TB | lineage4.4 | None |
SAMN02403469 | MDR-TB | lineage2.2.1 | za |
ERR7911115 | Pre-XDR-TB | lineage2.2.1 | vn |
SRR2024994 | Pre-XDR-TB | lineage2.2.1 | cn |
ERR7911592 | Pre-XDR-TB | lineage2.2.1 | za |
ERR7911506 | MDR-TB | lineage2.2.1 | vn |
ERR2706910 | MDR-TB | lineage5.2 | cd |
ERR7911398 | MDR-TB | lineage2.2.1 | us |
ERR10610098 | Pre-XDR-TB | lineage2.2.1 | None |
SRR5837710 | Pre-XDR-TB | lineage2.2.1.1 | th |
SRR16156816 | Pre-XDR-TB | lineage2.2.1 | None |
SRR13583358 | MDR-TB | lineage4.3.4.2 | None |
SRR10828189 | Pre-XDR-TB | lineage2.2.1.1 | None |
SRR18002960 | XDR-TB | lineage2.2.1 | None |
SRR23862159 | MDR-TB | lineage2.2.1 | None |
SRR29051250 | MDR-TB | lineage4.3.4.2 | None |
ERR10610276 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5866342 | MDR-TB | lineage2.2.1 | None |
ERR13285127 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR5866343 | MDR-TB | lineage2.2.1 | None |
SRR11662543 | MDR-TB | lineage2.2.1.1 | None |
ERR2600523 | MDR-TB | lineage4.3.3 | None |