lineage | Count |
---|---|
lineage2.2.1 | 2 |
lineage4.8 | 2 |
lineage1.2.1.2.1 | 1 |
lineage4.6.2.2 | 4 |
1 | |
lineage3.1 | 4 |
lineage4.1.2.1 | 1 |
lineage3.1.1 | 1 |
lineage4.6.5 | 1 |
lineage4.3.4;lineage3.1;lineage2.2.1.1;lineage2.1 | 1 |
lineage4.4.2 | 1 |
lineage6.2.2 | 1 |
spoligotype | Count |
---|---|
None | 20 |
ID | Drug resistance | Lineage | Country iso2 | SRR13423594 | Pre-XDR-TB | lineage2.2.1 | None | ERR5918043 | MDR-TB | lineage4.8 | za | ERR6336803 | Other | lineage1.2.1.2.1 | None | ERR9119628 | RR-TB | lineage4.6.2.2 | None | SRR13423565 | Pre-XDR-TB | lineage2.2.1 | None | SRR8791330 | HR-TB | None | SRR2100324 | MDR-TB | lineage3.1 | None | ERR11081321 | MDR-TB | lineage4.1.2.1 | None | ERR2510592 | Pre-XDR-TB | lineage4.6.2.2 | pk | ERR2245278 | Sensitive | lineage3.1.1 | no | ERR2510489 | RR-TB | lineage4.6.5 | pk | ERR234111 | MDR-TB | lineage3.1 | np | ERR2515384 | MDR-TB | lineage4.8 | za | ERR4872236 | RR-TB | lineage4.6.2.2 | None | ERR031461 | HR-TB | lineage4.3.4;lineage3.1;lineage2.2.1.1;lineage2.1 | None | SRR8651588 | Pre-XDR-TB | lineage4.4.2 | cn | ERR11044606 | MDR-TB | lineage4.6.2.2 | None | ERR031465 | MDR-TB | lineage3.1 | None | ERR10680122 | MDR-TB | lineage6.2.2 | None | ERR114476 | MDR-TB | lineage3.1 | None |
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