lineage | Count |
---|---|
lineage2.2.1 | 25 |
lineage4.1.2.1 | 6 |
lineage2.2.1.1 | 2 |
lineage4.2.1 | 2 |
lineage4.9 | 2 |
lineage4.5 | 2 |
lineage1.2.1.2 | 1 |
lineage2.2.1;lineage4.3.4.2 | 1 |
lineage4.4.1.1 | 6 |
lineage3 | 12 |
lineage4.7 | 2 |
1 | |
lineage4.2.2.2 | 2 |
lineage1.2.2.2 | 1 |
lineage1.1.2 | 4 |
lineage4.3.2 | 1 |
spoligotype | Count |
---|---|
None | 70 |
ID | Drug resistance | Lineage | Country iso2 | SRR14781924 | Pre-XDR-TB | lineage2.2.1 | None | SRR25515125 | MDR-TB | lineage2.2.1 | None | SRR23938683 | MDR-TB | lineage2.2.1 | None | ERR1034808 | Pre-XDR-TB | lineage4.1.2.1 | pt | SRR11972250 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR3743391 | Pre-XDR-TB | lineage4.2.1 | None | SRR8791311 | HR-TB | lineage4.9 | None | SRR15315955 | Pre-XDR-TB | lineage4.5 | None | ERR13285802 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755716 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207011 | MDR-TB | lineage2.2.1 | None | ERR13290887 | MDR-TB | lineage1.2.1.2 | None | SRR6832471 | MDR-TB | lineage2.2.1;lineage4.3.4.2 | None | ERR11774854 | MDR-TB | lineage4.4.1.1 | None | ERR2510642 | Pre-XDR-TB | lineage3 | pk | SRR29289264 | Pre-XDR-TB | lineage3 | None | ERR11774856 | MDR-TB | lineage4.4.1.1 | None | SRR2024927 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1034806 | Pre-XDR-TB | lineage4.1.2.1 | pt | ERR2653198 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR13285143 | MDR-TB | lineage4.7 | None | SRR1239337 | Other | None | SRR21276923 | Pre-XDR-TB | lineage4.5 | None | SRR7645949 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799336 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR13266048 | HR-TB | lineage3 | None | SRR29539450 | MDR-TB | lineage2.2.1 | None | ERR4276916 | MDR-TB | lineage3 | None | ERR10465885 | MDR-TB | lineage3 | None | ERR11488611 | MDR-TB | lineage1.2.2.2 | None | ERR10762319 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799163 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR29681343 | MDR-TB | lineage2.2.1 | None | SRR18149499 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10680135 | MDR-TB | lineage4.1.2.1 | None | ERR11798603 | Pre-XDR-TB | lineage2.2.1 | None | SRR10828185 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831261 | MDR-TB | lineage1.1.2 | de | ERR3335763 | MDR-TB | lineage2.2.1 | pk | ERR4799892 | MDR-TB | lineage3 | in | ERR11774853 | MDR-TB | lineage4.4.1.1 | None | ERR11080830 | MDR-TB | lineage1.1.2 | None | SRR5709808 | MDR-TB | lineage2.2.1 | th | ERR11043636 | MDR-TB | lineage4.7 | None | SRR5485593 | RR-TB | lineage4.9 | None | SRR18715339 | Pre-XDR-TB | lineage2.2.1 | None | ERR2677468 | MDR-TB | lineage1.1.2 | de | ERR4276900 | MDR-TB | lineage3 | None | ERR13276360 | MDR-TB | lineage3 | None | ERR1034807 | Pre-XDR-TB | lineage4.1.2.1 | pt | SRR5153928 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743433 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800044 | MDR-TB | lineage3 | in | ERR2653084 | MDR-TB | lineage4.4.1.1 | None | ERR10762494 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276424 | MDR-TB | lineage3 | None | SRR29289109 | Pre-XDR-TB | lineage3 | None | SRR29289123 | MDR-TB | lineage1.1.2 | None | ERR11776039 | MDR-TB | lineage4.4.1.1 | None | SRR28393644 | MDR-TB | lineage4.3.2 | None | SRR27069430 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR7911041 | Pre-XDR-TB | lineage2.2.1 | md | ERR551701 | MDR-TB | lineage2.2.1 | uz | SRR5709935 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709875 | MDR-TB | lineage2.2.1 | th | ERR13285867 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153835 | Pre-XDR-TB | lineage4.2.1 | None | ERR11798604 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035346 | MDR-TB | lineage4.1.2.1 | br | ERR4822305 | MDR-TB | lineage3 | de |
---|