lineage | Count |
---|---|
lineage2.2.1 | 21 |
lineage3 | 6 |
lineage4.8 | 2 |
1 | |
lineage4.9 | 1 |
lineage4.2.1 | 2 |
lineage1.2.1.2.1 | 1 |
lineage4.2.2.2 | 2 |
spoligotype | Count |
---|---|
None | 36 |
ID | Drug resistance | Lineage | Country iso2 | SRR1165481 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162754 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162701 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165599 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165539 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166805 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166708 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424739 | Pre-XDR-TB | lineage3 | None | SAMN02414987 | Pre-XDR-TB | lineage2.2.1 | se | ERR4815130 | Other | lineage4.8 | None | SRR5007180 | Other | None | SRR5153603 | MDR-TB | lineage2.2.1 | None | SAMN02414993 | Pre-XDR-TB | lineage2.2.1 | se | ERR11081767 | MDR-TB | lineage2.2.1 | None | SAMEA2534661 | MDR-TB | lineage2.2.1 | uz | ERR2516579 | MDR-TB | lineage4.9 | nl | SAMEA2533963 | MDR-TB | lineage2.2.1 | uz | ERR1873451 | Pre-XDR-TB | lineage2.2.1 | za | ERR4827571 | RR-TB | lineage2.2.1 | None | ERR4797795 | Pre-XDR-TB | lineage3 | in | SRR6356940 | MDR-TB | lineage2.2.1 | None | ERR4796392 | Pre-XDR-TB | lineage3 | in | ERR4797025 | Pre-XDR-TB | lineage3 | in | ERR11043498 | MDR-TB | lineage4.2.1 | None | ERR4797358 | Pre-XDR-TB | lineage3 | in | SRR6797765 | MDR-TB | lineage4.8 | None | SRR6356972 | MDR-TB | lineage2.2.1 | None | ERR11043480 | MDR-TB | lineage4.2.1 | None | ERR3794476 | MDR-TB | lineage2.2.1 | None | ERR6336701 | HR-TB | lineage1.2.1.2.1 | None | ERR3794482 | MDR-TB | lineage2.2.1 | None | ERR4799207 | Pre-XDR-TB | lineage3 | None | ERR7737662 | MDR-TB | lineage4.2.2.2 | None | ERR7737926 | MDR-TB | lineage4.2.2.2 | None | SRR16088568 | Pre-XDR-TB | lineage2.2.1 | None |
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