lineage | Count |
---|---|
lineage3.1.2 | 4 |
lineage4.4.2 | 1 |
lineage2.2.1 | 19 |
lineage2.2 | 1 |
lineage4.3.2 | 4 |
lineage4.1.1.3 | 1 |
lineage5.1.1 | 3 |
lineage3 | 9 |
lineage4.3.4.2.1 | 2 |
lineage4.3.3 | 2 |
lineage4.1.2 | 1 |
lineage4.3.4.2 | 2 |
lineage4 | 1 |
lineage4.1.2.1 | 3 |
lineage4.3.4 | 1 |
spoligotype | Count |
---|---|
None | 54 |
ID | Drug resistance | Lineage | Country iso2 | ERR4799903 | Pre-XDR-TB | lineage3.1.2 | in | ERR4798318 | Pre-XDR-TB | lineage3.1.2 | in | SRR8651601 | MDR-TB | lineage4.4.2 | cn | SRR8344409 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831895 | MDR-TB | lineage2.2.1 | None | SRR8327216 | Pre-XDR-TB | lineage2.2.1 | None | SRR8335024 | Pre-XDR-TB | lineage2.2.1 | None | SRR8335314 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832040 | MDR-TB | lineage2.2 | None | ERR2984798 | MDR-TB | lineage4.3.2 | None | SRR8347538 | Pre-XDR-TB | lineage2.2.1 | None | SRR8348943 | MDR-TB | lineage2.2.1 | None | SRR8357274 | Pre-XDR-TB | lineage2.2.1 | None | SRR8370130 | Pre-XDR-TB | lineage2.2.1 | None | SRR8370129 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488916 | MDR-TB | lineage4.3.2 | None | ERR11488819 | MDR-TB | lineage4.3.2 | None | SRR8426907 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488805 | MDR-TB | lineage4.3.2 | None | DRR130172 | MDR-TB | lineage2.2.1 | None | ERR10680143 | MDR-TB | lineage2.2.1 | None | ERR10748318 | MDR-TB | lineage4.1.1.3 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR4831470 | Pre-XDR-TB | lineage3 | None | ERR4011996 | MDR-TB | lineage4.3.4.2.1 | None | ERR4012002 | MDR-TB | lineage4.3.4.2.1 | None | SRR1146416 | MDR-TB | lineage3 | None | SRR11033743 | MDR-TB | lineage2.2.1 | None | SRR1144789 | MDR-TB | lineage3 | None | ERR7737799 | MDR-TB | lineage3 | None | SRR24256090 | MDR-TB | lineage4.3.3 | None | SRR22424792 | Pre-XDR-TB | lineage3.1.2 | None | SRR1163146 | MDR-TB | lineage3 | None | SRR18714915 | MDR-TB | lineage2.2.1 | None | SRR1163051 | MDR-TB | lineage3 | None | ERR11080937 | MDR-TB | lineage3 | None | ERR11083087 | MDR-TB | lineage3 | None | ERR11082741 | MDR-TB | lineage2.2.1 | None | SRR21887678 | MDR-TB | lineage2.2.1 | None | SRR21798459 | HR-TB | lineage4.1.2 | None | SRR5152950 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4813303 | MDR-TB | lineage4 | None | SRR25827807 | Pre-XDR-TB | lineage3.1.2 | None | SRR24256238 | MDR-TB | lineage4.3.3 | None | ERR2653055 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR5152973 | Pre-XDR-TB | lineage4.3.4.2 | None | SAMN02414870 | MDR-TB | lineage3 | se | ERR702432 | MDR-TB | lineage5.1.1 | gh | ERR2653111 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2653099 | Pre-XDR-TB | lineage4.3.4 | None | ERR2653179 | MDR-TB | lineage4.1.2.1 | None | SRR5266547 | MDR-TB | lineage2.2.1 | ru | ERR2181457 | MDR-TB | lineage5.1.1 | gh | ERR4827435 | MDR-TB | lineage2.2.1 | None |
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