lineage | Count |
---|---|
lineage2.2.1 | 8 |
2 | |
lineage4.8 | 4 |
lineage3.1 | 1 |
lineage4.2.2.2 | 2 |
lineage2.2.2 | 4 |
lineage4.3.4.2 | 1 |
lineage4.2.1 | 5 |
lineage3.1.1 | 1 |
lineage3 | 1 |
lineage4.3.3 | 4 |
lineage4.1.2.1 | 1 |
lineage4.2.2.1 | 2 |
lineage1.1.3.1 | 1 |
lineage4.3 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 39 |
ID | Drug resistance | Lineage | Country iso2 | ERR11081756 | Pre-XDR-TB | lineage2.2.1 | None | SRR21276942 | Pre-XDR-TB | lineage2.2.1 | None | SRR5485576 | MDR-TB | None | ERR2510765 | Pre-XDR-TB | lineage4.8 | None | ERR2510623 | Pre-XDR-TB | lineage3.1 | pk | ERR4822388 | Pre-XDR-TB | lineage2.2.1 | kg | ERR2510764 | Pre-XDR-TB | lineage4.8 | it | ERR11049333 | MDR-TB | lineage4.2.2.2 | None | SRR1723426 | Pre-XDR-TB | lineage2.2.2 | cn | ERR2653240 | MDR-TB | lineage4.3.4.2 | None | SRR23310943 | Pre-XDR-TB | lineage4.2.1 | None | SRR5709864 | MDR-TB | lineage2.2.1 | th | SRR23311012 | MDR-TB | lineage4.2.1 | None | ERR3077965 | MDR-TB | lineage3.1.1 | None | ERR4872275 | XDR-TB | lineage4.2.1 | None | SRR6824459 | MDR-TB | lineage2.2.1 | cn | SRR6964512 | MDR-TB | lineage3 | None | SRR7131109 | Pre-XDR-TB | lineage4.8 | None | SRR6824594 | Pre-XDR-TB | lineage2.2.2 | cn | ERR502946 | Pre-XDR-TB | lineage2.2.2 | None | ERR3132147 | MDR-TB | lineage4.3.3 | None | ERR067598 | MDR-TB | lineage2.2.1 | ru | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR7795462 | MDR-TB | lineage4.1.2.1 | None | SRR8353479 | Pre-XDR-TB | lineage2.2.1 | None | ERR3639807 | MDR-TB | lineage4.2.2.1 | None | ERR11043336 | MDR-TB | lineage4.2.2.1 | None | ERR11044347 | MDR-TB | lineage4.2.2.2 | None | ERR1213902 | MDR-TB | lineage4.3.3 | pe | ERR4553778 | MDR-TB | None | ERR4800205 | Pre-XDR-TB | lineage4.3.3 | in | ERR4553785 | Pre-XDR-TB | lineage1.1.3.1 | None | ERR4797738 | Pre-XDR-TB | lineage4.3.3 | in | ERR7162981 | Pre-XDR-TB | lineage2.2.1 | None | SRR10379953 | XDR-TB | lineage4.2.1 | None | ERR9907760 | Pre-XDR-TB | lineage4.3 | None | SRR10305976 | Pre-XDR-TB | lineage2.2.2 | None | SRR10379955 | MDR-TB | lineage4.2.1 | None | SRR18665442 | MDR-TB | lineage4.1.1.3 | None |
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