Rv2043c - p.Trp68Arg
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
5 RR-TB
11 HR-TB
174 MDR-TB
60 Pre-XDR-TB
5 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 132 |
| lineage4.8 | 10 |
| lineage3.1.2;lineage4.3.3 | 1 |
| lineage3 | 13 |
| lineage2.2.1;lineage4.3.1 | 1 |
| lineage4.3.3 | 10 |
| lineage1.2.1.2 | 2 |
| lineage4.3.2 | 8 |
| lineage3;lineage4 | 5 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage2.2.1.1 | 28 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4.2 | 5 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage4.2.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage1.1.2 | 3 |
| lineage4.2.1 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage2.1 | 2 |
| lineage1.2.2.1 | 2 |
| lineage4.3.2.1 | 5 |
| lineage1.2.1.2.1 | 2 |
| lineage4.5 | 2 |
| lineage3.1.2;lineage4.2.2.2;lineage4.3.3 | 1 |
| lineage4.6.4 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.3.1 | 2 |
| lineage3.1.1 | 1 |
| lineage4.6.1.2 | 4 |
| lineage2.2.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 259 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180990 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610215 | Other | lineage4.8 | None | ERR553217 | MDR-TB | lineage2.2.1 | None | ERR11080837 | Pre-XDR-TB | lineage4.8 | None | SRR28706698 | XDR-TB | lineage2.2.1 | None | SRR25827341 | Pre-XDR-TB | lineage3.1.2;lineage4.3.3 | None | ERR553217_ERR553218 | MDR-TB | lineage2.2.1 | None | SRR3086352 | MDR-TB | lineage4.8 | None | ERR2510852 | MDR-TB | lineage4.8 | it | ERR4796572 | Pre-XDR-TB | lineage3 | in | SRR13180281 | MDR-TB | lineage2.2.1 | None | SRR24256126 | MDR-TB | lineage2.2.1 | None | ERR12268447 | Pre-XDR-TB | lineage2.2.1;lineage4.3.1 | None | ERR550770_ERR550771 | MDR-TB | lineage2.2.1 | None | ERR9125123 | Pre-XDR-TB | lineage3 | None | ERR4827991 | MDR-TB | lineage2.2.1 | None | ERR13285753 | Pre-XDR-TB | lineage4.3.3 | None | SRR070017 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866106 | MDR-TB | lineage2.2.1 | None | SRR21576603 | MDR-TB | lineage1.2.1.2 | None | SRR29051554 | MDR-TB | lineage4.3.2 | None | SRR18715342 | MDR-TB | lineage2.2.1 | None | ERR13290424 | MDR-TB | lineage3;lineage4 | None | SRR29051560 | MDR-TB | lineage4.3.2 | None | ERR234613 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR9224938 | MDR-TB | lineage4.3.2 | None | SRR28351625 | MDR-TB | lineage2.2.1 | None | SRR25207394 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714928 | Pre-XDR-TB | lineage2.2.1 | None | SRR9224943 | MDR-TB | lineage4.3.2 | None | SRR5526157 | MDR-TB | lineage2.2.1.1 | None | ERR13285175 | MDR-TB | lineage2.2.1 | None | SRR28045916 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13290723 | HR-TB | lineage2.2.1 | None | SRR29016952 | Other | lineage4.1.2.1 | None | SRR13583435 | MDR-TB | lineage4.3.4.2 | None | SRR29681268 | MDR-TB | lineage2.2.1 | None | SRR14782658 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR13583427 | MDR-TB | lineage4.3.4.2 | None | SRR18002914 | RR-TB | lineage2.2.1 | None | SRR10430342 | MDR-TB | lineage2.2.1 | None | SRR10040195 | MDR-TB | lineage2.2.1 | None | SRR29538959 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887721 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310978 | MDR-TB | lineage2.2.1 | None | ERR3794383 | MDR-TB | lineage2.2.1 | None | SRR6785501 | MDR-TB | lineage2.2.1 | None | ERR2510520 | Pre-XDR-TB | lineage4.2.2 | pk | ERR5865752 | MDR-TB | lineage2.2.1 | None | SRR5527200 | MDR-TB | lineage2.2.1.1 | None | ERR234621 | MDR-TB | lineage2.2.1 | ru | SRR10040444 | MDR-TB | lineage2.2.1 | None | ERR4796813 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798166 | MDR-TB | lineage3 | in | SRR29017312 | HR-TB | lineage2.2.1 | None | ERR4799054 | MDR-TB | lineage1.2.2.2 | in | SRR25207118 | MDR-TB | lineage2.2.1 | None | ERR13290425 | MDR-TB | lineage3;lineage4 | None | ERR4797807 | MDR-TB | lineage1.2.2.2 | in | ERR551015 | MDR-TB | lineage2.2.1 | None | ERR4822403 | Pre-XDR-TB | lineage2.2.1 | ua | ERR4822402 | Pre-XDR-TB | lineage2.2.1 | ua | ERR2600505 | MDR-TB | lineage2.2.1 | None | ERR3287756 | RR-TB | lineage4.1.2.1 | pe | SRR28888046 | XDR-TB | lineage2.2.1 | None | SRR28045872 | MDR-TB | lineage1.1.2 | None | SRR28351318 | XDR-TB | lineage4.2.1 | None | SRR28394030 | MDR-TB | lineage4.3.2 | None | SRR6785464 | MDR-TB | lineage2.2.1 | None | ERR227974 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR4831959 | HR-TB | lineage2.2.1 | vn | ERR7911277 | MDR-TB | lineage2.1 | vn | SRR29539789 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866107 | MDR-TB | lineage2.2.1 | None | SRR10380102 | MDR-TB | lineage4.3.3 | None | SAMEA2533458 | MDR-TB | lineage2.2.1 | uz | SAMEA2533636 | MDR-TB | lineage2.2.1 | uz | SAMEA2535218 | MDR-TB | lineage2.2.1 | uz | ERR2517086 | MDR-TB | lineage1.2.2.1 | gb | ERR2516802 | MDR-TB | lineage1.2.2.1 | gb | ERR2516582 | MDR-TB | lineage4.8 | nl | SRR5709902 | Pre-XDR-TB | lineage2.2.1 | th | SRR5552415 | MDR-TB | lineage2.2.1.1 | pg | SRR5549699 | MDR-TB | lineage2.2.1.1 | pg | SRR5533249 | MDR-TB | lineage2.2.1.1 | pg | SRR5526865 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR5526842 | MDR-TB | lineage2.2.1.1 | pg | SRR5526785 | MDR-TB | lineage2.2.1.1 | pg | SRR5525998 | MDR-TB | lineage2.2.1.1 | pg | SRR5526351 | MDR-TB | lineage2.2.1.1 | pg | SRR1163175 | MDR-TB | lineage3 | None | SRR29094379 | MDR-TB | lineage4.3.3 | None | ERR3794499 | Pre-XDR-TB | lineage2.2.1 | None | SRR1144740 | MDR-TB | lineage3;lineage4 | None | ERR10680180 | MDR-TB | lineage4.8 | None | SRR6117320 | MDR-TB | lineage2.2.1.1 | au | SRR6079922 | MDR-TB | lineage2.2.1.1 | au | SRR6079967 | MDR-TB | lineage2.2.1.1 | au | SRR6040100 | MDR-TB | lineage2.2.1.1 | au | SRR6079930 | MDR-TB | lineage2.2.1.1 | au | SRR6117345 | MDR-TB | lineage2.2.1.1 | au | SAMN02419592 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419577 | Pre-XDR-TB | lineage2.2.1 | by | SRR29081587 | MDR-TB | lineage4.3.3 | None | SRR5525997 | MDR-TB | lineage2.2.1.1 | None | DRR130061 | MDR-TB | lineage2.2.1.1 | None | SRR1184325 | MDR-TB | lineage4.3.2.1 | None | SRR5065397 | HR-TB | lineage2.2.1 | vn | SRR29080982 | MDR-TB | lineage1.2.1.2.1 | None | SRR21277578 | Pre-XDR-TB | lineage4.5 | None | SRR13583413 | MDR-TB | lineage4.3.2 | None | SRR24256287 | MDR-TB | lineage2.2.1 | None | ERR551697_ERR551698 | MDR-TB | lineage2.2.1 | None | ERR2516732 | MDR-TB | lineage4.3.2 | pe | SRR25827517 | Pre-XDR-TB | lineage3.1.2;lineage4.2.2.2;lineage4.3.3 | None | SRR23691320 | MDR-TB | lineage2.2.1 | None | SRR21747040 | MDR-TB | lineage2.2.1 | None | ERR13289352 | MDR-TB | lineage4.3.2.1 | None | ERR550770 | MDR-TB | lineage2.2.1 | None | ERR5865811 | MDR-TB | lineage2.2.1 | None | SRR10303345 | MDR-TB | lineage2.2.1 | None | SRR5526360 | MDR-TB | lineage2.2.1.1 | None | ERR10762265 | Pre-XDR-TB | lineage4.3.3 | None | SRR7645902 | MDR-TB | lineage4.3.3 | None | SRR25207167 | MDR-TB | lineage2.2.1 | None | SRR18715079 | Pre-XDR-TB | lineage2.2.1 | None | ERR3276269 | MDR-TB | lineage2.2.1 | nl | ERR2600504 | MDR-TB | lineage2.2.1 | None | ERR3256126 | MDR-TB | lineage4.3.4.2 | ph | SRR10828182 | Pre-XDR-TB | lineage2.2.1 | None | SRR069929 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762434 | MDR-TB | lineage4.3.3 | None | SRR29681429 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290791 | MDR-TB | lineage2.2.1 | None | SRR29681375 | Pre-XDR-TB | lineage2.2.1 | None | SRR5533176 | MDR-TB | lineage2.2.1.1 | None | ERR7737678 | MDR-TB | lineage2.1 | None | SRR28646056 | MDR-TB | lineage4.1.2.1 | None | SRR29772615 | RR-TB | lineage2.2.1 | None | SRR29051255 | MDR-TB | lineage4.3.4.2 | None | ERR551016_ERR551015 | MDR-TB | lineage2.2.1 | None | ERR551016 | MDR-TB | lineage2.2.1 | None | ERR3794485 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162509 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865730 | MDR-TB | lineage2.2.1 | None | SRR3085260 | MDR-TB | lineage4.8 | None | ERR3794534 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040430 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29385445 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865753 | MDR-TB | lineage2.2.1 | None | ERR5866539 | HR-TB | lineage2.2.1 | None | ERR9119481 | MDR-TB | lineage4.6.4 | None | ERR3273213 | MDR-TB | lineage2.2.1 | None | SRR12142433 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043484 | MDR-TB | lineage2.2.1 | None | ERR13290422 | MDR-TB | lineage3;lineage4 | None | SRR16088340 | MDR-TB | lineage2.2.1 | None | ERR5866176 | MDR-TB | lineage2.2.1 | None | ERR16022336 | MDR-TB | lineage3 | None | SRR1158943 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799128 | Pre-XDR-TB | lineage3.1.2.1 | in | ERR4872075 | MDR-TB | lineage4.6.4 | None | SRR29017555 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR1163382 | MDR-TB | lineage3 | None | SAMN02414913 | MDR-TB | lineage3 | se | SAMN02585996 | MDR-TB | lineage4.3.2.1 | za | ERR11050532 | MDR-TB | lineage4.3.1 | None | SRR16058593 | Pre-XDR-TB | lineage3 | None | SRR28706424 | MDR-TB | lineage2.2.1 | None | SRR28888054 | XDR-TB | lineage2.2.1 | None | ERR5865812 | MDR-TB | lineage2.2.1 | None | ERR5897083 | Pre-XDR-TB | lineage3 | None | ERR4831983 | HR-TB | lineage2.2.1 | vn | SRR2024938 | MDR-TB | lineage2.2.1 | cn | SRR2024992 | MDR-TB | lineage2.2.1 | cn | ERR8665614 | MDR-TB | lineage2.2.1 | None | ERR7911322 | MDR-TB | lineage2.2.1.1 | vn | ERR7737765 | MDR-TB | lineage3.1.1 | None | ERR2707038 | MDR-TB | lineage4.6.1.2 | cd | ERR4828634 | HR-TB | lineage2.2.1 | vn | SAMEA2534128 | MDR-TB | lineage2.2.1 | uz | ERR1465875 | MDR-TB | lineage4.8 | None | SRR5709870 | Pre-XDR-TB | lineage2.2.1 | th | ERR552954 | MDR-TB | lineage2.2.1 | de | SRR1181309 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430398 | MDR-TB | lineage2.2.1 | None | SRR22424926 | Pre-XDR-TB | lineage3 | None | SRR5526903 | MDR-TB | lineage2.2.1.1 | None | SRR29231775 | MDR-TB | lineage4.6.1.2 | None | ERR13291105 | MDR-TB | lineage2.2.2 | None | SRR24256038 | MDR-TB | lineage2.2.1 | None | SRR1181074 | Pre-XDR-TB | lineage2.2.1 | None | SRR5533143 | MDR-TB | lineage2.2.1.1 | None | SRR26937001 | MDR-TB | lineage2.2.1 | None | SRR5533131 | RR-TB | lineage2.2.1.1 | None | SRR28351496 | MDR-TB | lineage2.2.1 | None | SRR23311048 | MDR-TB | lineage4.3.3 | None | ERR551697 | MDR-TB | lineage2.2.1 | None | SRR25827811 | MDR-TB | lineage1.1.2 | None | ERR5866174 | MDR-TB | lineage2.2.1 | None | ERR4972572 | MDR-TB | lineage4.3.3 | None | ERR11081427 | HR-TB | lineage2.2.1 | None | SRR22249997 | MDR-TB | lineage2.2.1 | None | ERR3794447 | Pre-XDR-TB | lineage2.2.1 | None | ERR3273114 | MDR-TB | lineage4.4.2 | None | ERR5866175 | MDR-TB | lineage2.2.1 | None | SRR5152907 | MDR-TB | lineage2.2.1 | None | SRR1184127 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232643 | MDR-TB | lineage2.2.1 | None | SRR1175092 | MDR-TB | lineage4.3.2.1 | None | ERR11050531 | MDR-TB | lineage4.3.1 | None | ERR9806651 | Other | lineage4.8 | None | SRR29539705 | MDR-TB | lineage2.2.1 | None | SRR29050873 | MDR-TB | lineage4.3.2 | None | ERR551698 | MDR-TB | lineage2.2.1 | None | SRR24828603 | MDR-TB | lineage2.2.1 | None | SRR29017373 | MDR-TB | lineage4.3.4.1 | None | ERR550771 | MDR-TB | lineage2.2.1 | None | SRR12062518 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29081010 | MDR-TB | lineage1.2.1.2.1 | None | ERR13290423 | MDR-TB | lineage3;lineage4 | None | ERR1654670 | MDR-TB | lineage4.6.1.2 | None | SRR29126785 | Other | lineage4.4.1.1 | None | SRR21277279 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307455 | Pre-XDR-TB | lineage2.2.1 | None | ERR13258503 | MDR-TB | lineage2.2.1.1 | None | SRR069952 | Pre-XDR-TB | lineage2.2.1 | None | SRR1146375 | MDR-TB | lineage3 | None | ERR11082417 | HR-TB | lineage2.2.1 | None | SRR15368990 | Pre-XDR-TB | lineage4.5 | None | SRR29093251 | MDR-TB | lineage4.8 | None | SRR29051226 | MDR-TB | lineage4.3.4.2 | None | SRR5526839 | MDR-TB | lineage2.2.1.1 | None | SRR30180231 | MDR-TB | lineage1.2.1.2 | None | SRR28706626 | XDR-TB | lineage2.2.1 | None | SRR29289394 | Pre-XDR-TB | lineage3 | None | ERR1035312 | Pre-XDR-TB | lineage4.3.3 | br | ERR13267073 | Pre-XDR-TB | lineage3 | None | ERR5865729 | MDR-TB | lineage2.2.1 | None | SRR28434983 | MDR-TB | lineage2.2.1 | None | SRR10303313 | MDR-TB | lineage2.2.1 | None | SRR28888059 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045859 | MDR-TB | lineage1.1.2 | None | SRR28435003 | MDR-TB | lineage2.2.1 | None | ERR502936 | RR-TB | lineage2.2.1 | None | SRR30180458 | MDR-TB | lineage2.2.1 | None | ERR1199099 | MDR-TB | lineage4.6.1.2 | cd | ERR133901 | Pre-XDR-TB | lineage2.2.1 | ru | ERR137243 | Pre-XDR-TB | lineage2.2.1 | ru | ERR234651 | MDR-TB | lineage2.2.1 | ru | ERR13290794 | HR-TB | lineage2.2.1 | None | ERR13291143 | HR-TB | lineage2.2.1 | None | ERR1035096 | Pre-XDR-TB | lineage1.1.1.1 | vn | SRR11662128 | MDR-TB | lineage2.2.1 | None | SRR1196552 | MDR-TB | lineage4.3.2.1 | None | SRR5065250 | MDR-TB | lineage2.2.1 | vn | SRR28498561 | MDR-TB | lineage2.2.1 | None | SRR5067222 | MDR-TB | lineage2.2.1 | vn | ERR553218 | MDR-TB | lineage2.2.1 | None |
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