lineage | Count |
---|---|
lineage3 | 4 |
lineage3.1.1 | 59 |
lineage2.2.1 | 8 |
lineage2.2 | 1 |
lineage2.2.1.1 | 1 |
lineage4.6.5 | 39 |
lineage2.1 | 1 |
lineage4.3.3 | 2 |
lineage4.3.3;lineage3.1.1 | 4 |
lineage4.9 | 1 |
2 | |
lineage3.1 | 2 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 125 |
ID | Drug resistance | Lineage | Country iso2 | ERR2510442 | MDR-TB | lineage3 | pk | ERR2510542 | MDR-TB | lineage3 | pk | SAMN02350435 | MDR-TB | lineage3.1.1 | za | ERR4828003 | MDR-TB | lineage2.2.1 | None | ERR2510449 | Pre-XDR-TB | lineage3 | pk | SAMN02053756 | HR-TB | lineage3.1.1 | za | SAMN02403591 | MDR-TB | lineage3.1.1 | za | SRR23340154 | Pre-XDR-TB | lineage2.2 | None | SRR5709922 | MDR-TB | lineage2.2.1.1 | th | ERR4822294 | MDR-TB | lineage4.6.5 | None | SAMN02586046 | MDR-TB | lineage3.1.1 | za | SAMN02403517 | MDR-TB | lineage3.1.1 | za | ERR4828826 | MDR-TB | lineage4.6.5 | it | ERR4828049 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828083 | MDR-TB | lineage2.2.1 | None | ERR4828135 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829377 | MDR-TB | lineage4.6.5 | it | ERR4830485 | MDR-TB | lineage3.1.1 | za | ERR4828994 | MDR-TB | lineage4.6.5 | it | ERR4830795 | MDR-TB | lineage4.6.5 | et | ERR4828839 | MDR-TB | lineage4.6.5 | None | ERR4828873 | MDR-TB | lineage4.6.5 | None | ERR4828980 | MDR-TB | lineage4.6.5 | None | ERR4831233 | MDR-TB | lineage4.6.5 | None | ERR4831257 | MDR-TB | lineage2.2.1 | None | ERR4831605 | MDR-TB | lineage2.1 | vn | ERR4831324 | MDR-TB | lineage4.6.5 | de | SRR833020 | HR-TB | lineage3.1.1 | None | ERR4831764 | MDR-TB | lineage2.2.1 | vn | SRR833193 | HR-TB | lineage3.1.1 | None | ERR11043121 | MDR-TB | lineage4.6.5 | None | ERR1035276 | MDR-TB | lineage4.3.3 | br | ERR10748574 | MDR-TB | lineage3.1.1 | None | ERR11043111 | MDR-TB | lineage4.6.5 | None | SRR7829594 | MDR-TB | lineage4.6.5 | None | ERR11043110 | MDR-TB | lineage4.6.5 | None | ERR11043537 | MDR-TB | lineage4.6.5 | None | ERR11043614 | MDR-TB | lineage4.6.5 | None | ERR11043538 | MDR-TB | lineage4.6.5 | None | ERR11044170 | MDR-TB | lineage4.6.5 | None | ERR11043665 | MDR-TB | lineage4.6.5 | None | ERR11044102 | MDR-TB | lineage4.6.5 | None | ERR11044129 | MDR-TB | lineage4.6.5 | None | ERR11044069 | MDR-TB | lineage4.6.5 | None | ERR11044475 | MDR-TB | lineage4.6.5 | None | ERR11044588 | MDR-TB | lineage4.6.5 | None | ERR11044365 | MDR-TB | lineage4.6.5 | None | ERR11049438 | MDR-TB | lineage4.6.5 | None | ERR11049467 | MDR-TB | lineage4.6.5 | None | ERR9992858 | MDR-TB | lineage3.1.1 | None | ERR7737717 | MDR-TB | lineage3.1.1 | None | ERR7737902 | MDR-TB | lineage3.1.1 | None | ERR8975702 | Pre-XDR-TB | lineage3.1.1 | None | ERR9117701 | MDR-TB | lineage4.6.5 | None | ERR7737887 | MDR-TB | lineage3.1.1 | None | ERR9992639 | MDR-TB | lineage3.1.1 | None | SRR1011477 | MDR-TB | lineage3.1.1 | None | SRR10315620 | MDR-TB | lineage3.1.1 | None | SRR10315490 | MDR-TB | lineage3.1.1 | None | SRR1062848 | MDR-TB | lineage3.1.1 | None | SRR10315623 | Pre-XDR-TB | lineage3.1.1 | None | SRR10315676 | MDR-TB | lineage3.1.1 | None | SRR10315622 | Pre-XDR-TB | lineage3.1.1 | None | SRR10315654 | MDR-TB | lineage3.1.1 | None | SRR10315690 | MDR-TB | lineage3.1.1 | None | SRR1167252 | MDR-TB | lineage3.1.1 | None | SRR1165270 | MDR-TB | lineage3.1.1 | None | SRR1165657 | MDR-TB | lineage3.1.1 | None | SRR1165655 | MDR-TB | lineage3.1.1 | None | SRR1165230 | MDR-TB | lineage3.1.1 | None | SRR1165315 | Pre-XDR-TB | lineage4.3.3;lineage3.1.1 | None | SRR1165649 | MDR-TB | lineage3.1.1 | None | SRR1167183 | Pre-XDR-TB | lineage4.3.3;lineage3.1.1 | None | SRR1167374 | MDR-TB | lineage3.1.1 | None | SRR1167370 | MDR-TB | lineage3.1.1 | None | SRR1167290 | MDR-TB | lineage3.1.1 | None | SRR1167351 | MDR-TB | lineage3.1.1 | None | SRR1169186 | MDR-TB | lineage3.1.1 | None | SRR1167389 | MDR-TB | lineage3.1.1 | None | SRR1168954 | MDR-TB | lineage3.1.1 | None | SRR1169214 | MDR-TB | lineage3.1.1 | None | SRR1173166 | Other | lineage4.9 | None | SRR1172046 | MDR-TB | lineage3.1.1 | None | SRR1172744 | MDR-TB | lineage3.1.1 | None | SRR1169227 | MDR-TB | lineage3.1.1 | None | SRR1169265 | MDR-TB | lineage3.1.1 | None | SRR1169295 | MDR-TB | lineage3.1.1 | None | SRR1172165 | MDR-TB | lineage3.1.1 | None | SRR1172969 | MDR-TB | None | SRR1173789 | Pre-XDR-TB | lineage4.3.3;lineage3.1.1 | None | SRR1173283 | MDR-TB | lineage3.1.1 | None | SRR1173363 | HR-TB | None | SRR1173386 | MDR-TB | lineage3.1.1 | None | SRR1173518 | Pre-XDR-TB | lineage4.3.3;lineage3.1.1 | None | SRR1173650 | MDR-TB | lineage3.1.1 | None | SRR1175075 | MDR-TB | lineage3.1.1 | None | SRR1175029 | MDR-TB | lineage3.1.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1175440 | MDR-TB | lineage3.1.1 | None | SRR1184292 | MDR-TB | lineage3.1.1 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184357 | MDR-TB | lineage3.1.1 | None | ERR11050867 | MDR-TB | lineage4.6.5 | None | SRR1196563 | MDR-TB | lineage3.1.1 | None | SRR2100019 | Other | lineage3 | None | SRR2100419 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196499 | MDR-TB | lineage3.1.1 | None | SRR13583377 | Pre-XDR-TB | lineage4.3.3 | None | ERR11081049 | MDR-TB | lineage4.6.5 | None | ERR11068067 | MDR-TB | lineage4.6.5 | None | ERR11081688 | MDR-TB | lineage4.6.5 | None | ERR11081160 | MDR-TB | lineage4.6.5 | None | ERR11081207 | MDR-TB | lineage4.6.5 | None | ERR11081318 | MDR-TB | lineage4.6.5 | None | ERR11081348 | MDR-TB | lineage4.6.5 | None | ERR11081093 | MDR-TB | lineage4.6.5 | None | ERR11138646 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082694 | MDR-TB | lineage4.6.5 | None | SAMN02403531 | MDR-TB | lineage3.1.1 | za | ERR2677450 | MDR-TB | lineage4.6.5 | de | SAMN02586091 | MDR-TB | lineage3.1.1 | za | SAMN02403590 | MDR-TB | lineage3.1.1 | za | SAMN02403540 | MDR-TB | lineage3.1.1 | za | SAMN02403539 | MDR-TB | lineage3.1.1 | za | ERR2229359 | Other | lineage4.8 | dk |
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