Rv2043c - p.Trp68Cys
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
2 RR-TB
5 HR-TB
138 MDR-TB
16 Pre-XDR-TB
1 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.1 | 67 |
| lineage4.6.5 | 70 |
| lineage2.2.1 | 11 |
| lineage3.1 | 1 |
| lineage2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3.1.1;lineage4.3.3 | 4 |
| lineage4.3.3 | 3 |
| lineage3 | 3 |
| lineage4.4.2 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 163 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1167389 | MDR-TB | lineage3.1.1 | None | ERR4831233 | MDR-TB | lineage4.6.5 | None | ERR4828083 | MDR-TB | lineage2.2.1 | None | SRR1169295 | MDR-TB | lineage3.1.1 | None | ERR2120274 | MDR-TB | lineage4.6.5 | None | SRR1167374 | MDR-TB | lineage3.1.1 | None | SRR1169214 | MDR-TB | lineage3.1.1 | None | ERR11081348 | MDR-TB | lineage4.6.5 | None | SRR1196499 | MDR-TB | lineage3.1.1 | None | ERR11081207 | MDR-TB | lineage4.6.5 | None | SRR1165655 | MDR-TB | lineage3.1.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR11081688 | MDR-TB | lineage4.6.5 | None | SRR1172165 | MDR-TB | lineage3.1.1 | None | ERR10748574 | MDR-TB | lineage3.1.1 | None | SRR1196563 | MDR-TB | lineage3.1.1 | None | ERR11044129 | MDR-TB | lineage4.6.5 | None | ERR2120288 | MDR-TB | lineage4.6.5 | None | SAMN02403531 | MDR-TB | lineage3.1.1 | za | ERR11044365 | MDR-TB | lineage4.6.5 | None | ERR2120289 | MDR-TB | lineage4.6.5 | None | ERR11044170 | MDR-TB | lineage4.6.5 | None | ERR4831257 | MDR-TB | lineage2.2.1 | None | ERR4831605 | MDR-TB | lineage2.1 | vn | ERR4828826 | MDR-TB | lineage4.6.5 | it | ERR4830485 | MDR-TB | lineage3.1.1 | za | ERR4830795 | MDR-TB | lineage4.6.5 | et | ERR11081093 | MDR-TB | lineage4.6.5 | None | ERR8975702 | Pre-XDR-TB | lineage3.1.1 | None | SRR5709922 | MDR-TB | lineage2.2.1.1 | th | SAMN02053756 | HR-TB | lineage3.1.1 | za | SAMN02350435 | MDR-TB | lineage3.1.1 | za | SAMN02586091 | MDR-TB | lineage3.1.1 | za | ERR2677450 | MDR-TB | lineage4.6.5 | de | SRR1173789 | Pre-XDR-TB | lineage3.1.1;lineage4.3.3 | None | ERR11043110 | MDR-TB | lineage4.6.5 | None | ERR1035276 | MDR-TB | lineage4.3.3 | br | ERR9117701 | MDR-TB | lineage4.6.5 | None | ERR11049467 | MDR-TB | lineage4.6.5 | None | ERR13286064 | MDR-TB | lineage3.1.1 | None | ERR11043614 | MDR-TB | lineage4.6.5 | None | ERR9992639 | MDR-TB | lineage3.1.1 | None | ERR7737887 | MDR-TB | lineage3.1.1 | None | SRR7829594 | MDR-TB | lineage4.6.5 | None | ERR11081160 | MDR-TB | lineage4.6.5 | None | ERR11081318 | MDR-TB | lineage4.6.5 | None | SRR1172744 | MDR-TB | lineage3.1.1 | None | SRR1184292 | MDR-TB | lineage3.1.1 | None | ERR13276421 | MDR-TB | lineage4.6.5 | None | SRR10315622 | Pre-XDR-TB | lineage3.1.1 | None | SRR1173283 | MDR-TB | lineage3.1.1 | None | SRR1165657 | MDR-TB | lineage3.1.1 | None | ERR13278947 | MDR-TB | lineage4.6.5 | None | ERR2120287 | MDR-TB | lineage4.6.5 | None | SRR29341502 | MDR-TB | lineage4.6.5 | None | ERR4828049 | Pre-XDR-TB | lineage2.2.1 | None | SRR23340154 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276411 | MDR-TB | lineage4.6.5 | None | ERR13276423 | MDR-TB | lineage4.6.5 | None | ERR2510449 | Pre-XDR-TB | lineage3 | pk | ERR2510442 | MDR-TB | lineage3 | pk | ERR2510542 | MDR-TB | lineage3 | pk | SRR1169186 | MDR-TB | lineage3.1.1 | None | ERR4831324 | MDR-TB | lineage4.6.5 | de | SAMN02403540 | MDR-TB | lineage3.1.1 | za | SAMN02403590 | MDR-TB | lineage3.1.1 | za | SAMN02403539 | MDR-TB | lineage3.1.1 | za | SAMN02403591 | MDR-TB | lineage3.1.1 | za | SRR1168954 | MDR-TB | lineage3.1.1 | None | SRR1167370 | MDR-TB | lineage3.1.1 | None | SRR1169265 | MDR-TB | lineage3.1.1 | None | ERR4829377 | MDR-TB | lineage4.6.5 | it | SRR1165270 | MDR-TB | lineage3.1.1 | None | ERR11043538 | MDR-TB | lineage4.6.5 | None | ERR11081049 | MDR-TB | lineage4.6.5 | None | ERR11138646 | Pre-XDR-TB | lineage2.2.1 | None | SRR2100419 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044102 | MDR-TB | lineage4.6.5 | None | SAMN02586046 | MDR-TB | lineage3.1.1 | za | ERR4822294 | MDR-TB | lineage4.6.5 | None | ERR11775613 | MDR-TB | lineage3.1.1 | None | ERR13276215 | MDR-TB | lineage4.6.5 | None | SRR10315654 | MDR-TB | lineage3.1.1 | None | ERR7737902 | MDR-TB | lineage3.1.1 | None | ERR4828873 | MDR-TB | lineage4.6.5 | None | ERR13286063 | MDR-TB | lineage3.1.1 | None | ERR13288804 | MDR-TB | lineage3.1.1 | None | ERR4828980 | MDR-TB | lineage4.6.5 | None | ERR11044475 | MDR-TB | lineage4.6.5 | None | ERR11773717 | Pre-XDR-TB | lineage3.1.1 | None | SRR10315490 | MDR-TB | lineage3.1.1 | None | ERR13276286 | MDR-TB | lineage4.6.5 | None | ERR2120293 | MDR-TB | lineage4.6.5 | None | SRR1167252 | MDR-TB | lineage3.1.1 | None | SRR1169227 | RR-TB | lineage3.1.1 | None | ERR2120246 | MDR-TB | lineage4.6.5 | None | SRR1167290 | MDR-TB | lineage3.1.1 | None | SRR10040547 | MDR-TB | lineage4.4.2 | None | ERR9992858 | MDR-TB | lineage3.1.1 | None | SRR10315690 | MDR-TB | lineage3.1.1 | None | SRR1184357 | MDR-TB | lineage3.1.1 | None | SRR1165230 | MDR-TB | lineage3.1.1 | None | ERR7737717 | MDR-TB | lineage3.1.1 | None | SRR1011477 | MDR-TB | lineage3.1.1 | None | ERR13276133 | MDR-TB | lineage4.6.5 | None | SRR29096627 | RR-TB | lineage4.3.4.1 | None | SRR1175029 | MDR-TB | lineage3.1.1 | None | ERR13276387 | MDR-TB | lineage4.6.5 | None | ERR13276369 | MDR-TB | lineage4.6.5 | None | ERR4828135 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165315 | XDR-TB | lineage3.1.1;lineage4.3.3 | None | ERR2120286 | MDR-TB | lineage4.6.5 | None | ERR2120270 | MDR-TB | lineage4.6.5 | None | ERR2120290 | MDR-TB | lineage4.6.5 | None | ERR11043121 | MDR-TB | lineage4.6.5 | None | SRR1167351 | MDR-TB | lineage3.1.1 | None | ERR11044069 | MDR-TB | lineage4.6.5 | None | ERR13260464 | HR-TB | lineage3.1.1 | None | ERR2120257 | MDR-TB | lineage4.6.5 | None | SRR1173386 | MDR-TB | lineage3.1.1 | None | SRR29051545 | Pre-XDR-TB | lineage4.3.3 | None | ERR2120264 | MDR-TB | lineage4.6.5 | None | SRR1062848 | MDR-TB | lineage3.1.1 | None | ERR11775626 | MDR-TB | lineage3.1.1 | None | ERR4828994 | MDR-TB | lineage4.6.5 | it | ERR2120262 | MDR-TB | lineage4.6.5 | None | SRR1165624 | MDR-TB | lineage3.1.1 | None | SRR1167183 | Pre-XDR-TB | lineage3.1.1;lineage4.3.3 | None | ERR11043665 | MDR-TB | lineage4.6.5 | None | ERR11049438 | MDR-TB | lineage4.6.5 | None | ERR2120259 | MDR-TB | lineage4.6.5 | None | SRR1173650 | MDR-TB | lineage3.1.1 | None | ERR11082694 | MDR-TB | lineage4.6.5 | None | ERR11043111 | MDR-TB | lineage4.6.5 | None | SRR1175440 | MDR-TB | lineage3.1.1 | None | ERR11050867 | MDR-TB | lineage4.6.5 | None | SAMN02403517 | MDR-TB | lineage3.1.1 | za | ERR2307748 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831764 | MDR-TB | lineage2.2.1 | vn | SRR1173518 | Pre-XDR-TB | lineage3.1.1;lineage4.3.3 | None | ERR2120247 | MDR-TB | lineage4.6.5 | None | ERR2120294 | MDR-TB | lineage4.6.5 | None | SRR833020 | HR-TB | lineage3.1.1 | None | SRR833193 | HR-TB | lineage3.1.1 | None | SRR10315676 | MDR-TB | lineage3.1.1 | None | ERR2120291 | MDR-TB | lineage4.6.5 | None | ERR13276280 | MDR-TB | lineage4.6.5 | None | SRR10315620 | MDR-TB | lineage3.1.1 | None | ERR4828839 | MDR-TB | lineage4.6.5 | None | ERR11044588 | MDR-TB | lineage4.6.5 | None | ERR2120275 | MDR-TB | lineage4.6.5 | None | ERR11043537 | MDR-TB | lineage4.6.5 | None | SRR13583377 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172046 | MDR-TB | lineage3.1.1 | None | SRR29341526 | MDR-TB | lineage4.6.5 | None | SRR1175075 | Other | lineage3.1.1 | None | SRR10315623 | Pre-XDR-TB | lineage3.1.1 | None | ERR4828003 | MDR-TB | lineage2.2.1 | None | SRR10040400 | MDR-TB | lineage2.2.1 | None | ERR11068067 | MDR-TB | lineage4.6.5 | None | ERR13276254 | MDR-TB | lineage4.6.5 | None | SRR1165649 | MDR-TB | lineage3.1.1 | None | ERR2120292 | MDR-TB | lineage4.6.5 | None |
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