Rv2043c - p.Val125Gly
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
4 RR-TB
1 HR-TB
92 MDR-TB
77 Pre-XDR-TB
2 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2 | 114 |
| lineage4.1.1.3.1 | 17 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1 | 28 |
| lineage4.2.2 | 2 |
| lineage4.3.3 | 5 |
| lineage4.3.3;lineage4.3.4.2 | 1 |
| lineage4.9 | 5 |
| lineage4.1.2.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 178 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6511625 | MDR-TB | lineage4.3.4.2 | None | ERR1664631 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR386878 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR4829762 | RR-TB | lineage4.4.1.1 | None | SRR6824698 | MDR-TB | lineage2.2.1 | cn | ERR1034855 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1664626 | MDR-TB | lineage4.3.4.2 | None | SRR6511595 | MDR-TB | lineage4.3.4.2 | None | ERR1034821 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034886 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1664625 | MDR-TB | lineage4.3.4.2 | None | SRR2469373 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR3055242 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR1664634 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664630 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR278519 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR552106_ERR552105 | MDR-TB | lineage2.2.1 | None | ERR386856 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR6511593 | MDR-TB | lineage4.3.4.2 | None | ERR3275774 | MDR-TB | lineage4.2.2 | nl | SRR29274781 | MDR-TB | lineage4.3.3 | None | ERR403383 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR551305_ERR551306_ERR551307_ERR551308_ERR551304 | MDR-TB | lineage2.2.1 | None | ERR1034911 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | pt | ERR11044550 | Pre-XDR-TB | lineage2.2.1 | None | ERR7764406 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR7453038 | MDR-TB | lineage4.3.4.2 | None | SRR6511631 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR551306 | MDR-TB | lineage2.2.1 | None | SRR6511626 | MDR-TB | lineage4.3.4.2 | None | SRR6511633 | MDR-TB | lineage4.3.4.2 | None | ERR3132176 | MDR-TB | lineage4.3.4.2 | None | ERR1664627 | MDR-TB | lineage4.3.4.2 | None | SRR29681239 | Pre-XDR-TB | lineage2.2.1 | None | ERR551861 | Pre-XDR-TB | lineage2.2.1 | None | SRR7453012 | MDR-TB | lineage4.3.4.2 | None | ERR1664628 | MDR-TB | lineage4.3.4.2 | None | ERR9811807 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR551862_ERR551861 | Pre-XDR-TB | lineage2.2.1 | None | ERR275221 | MDR-TB | lineage4.3.4.2 | pt | ERR275197 | MDR-TB | lineage4.3.4.2 | None | ERR3132289 | RR-TB | lineage4.9 | None | ERR1213837 | RR-TB | lineage4.9 | kr | SRR17657935 | RR-TB | lineage4.9 | None | ERR1036295 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1664619 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664654 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1227530 | MDR-TB | lineage4.3.4.2 | None | ERR2864289 | MDR-TB | lineage4.3.4.2 | pt | ERR2864294 | MDR-TB | lineage4.3.4.2 | pt | ERR2864271 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2864269 | MDR-TB | lineage4.3.4.2 | pt | SRR17657950 | MDR-TB | lineage4.3.4.2 | None | ERR4676896 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR2100923 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR2101261 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR2864264 | MDR-TB | lineage4.3.4.2 | pt | ERR2864240 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2516840 | MDR-TB | lineage4.3.4.2 | gb | ERR1034909 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035181 | MDR-TB | lineage4.3.4.2 | pt | ERR1035220 | MDR-TB | lineage4.3.4.2 | pt | ERR1035221 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035225 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035234 | MDR-TB | lineage4.3.4.2 | pt | ERR1035228 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035247 | MDR-TB | lineage4.3.4.2 | pt | ERR1035243 | MDR-TB | lineage4.3.4.2 | pt | ERR1035244 | MDR-TB | lineage4.3.4.2 | pt | ERR551307 | MDR-TB | lineage2.2.1 | None | SRR29274745 | MDR-TB | lineage4.3.3 | None | ERR6326065 | MDR-TB | lineage4.3.4.2 | None | ERR10395965 | MDR-TB | lineage4.3.4.2 | None | ERR1664632 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2864297 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR551304 | MDR-TB | lineage2.2.1 | None | SRR24255921 | MDR-TB | lineage2.2.1 | None | ERR1034879 | MDR-TB | lineage4.3.4.2 | pt | ERR117688 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR6511634 | MDR-TB | lineage4.3.4.2 | None | ERR10867922 | MDR-TB | lineage4.3.3 | None | ERR552106 | MDR-TB | lineage2.2.1 | None | ERR1034873 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1227529 | MDR-TB | lineage4.3.4.2 | None | ERR4676883 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR266577 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR29274772 | Pre-XDR-TB | lineage4.3.3 | None | SRR25207255 | MDR-TB | lineage2.2.1 | None | SRR8433192 | MDR-TB | lineage2.2.1 | None | ERR1036285 | MDR-TB | lineage4.3.4.2 | pt | ERR386895 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR29681377 | Pre-XDR-TB | lineage2.2.1 | None | ERR5530525 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1034894 | MDR-TB | lineage4.3.4.2 | pt | SRR7453036 | MDR-TB | lineage4.3.4.2 | None | SRR6511630 | MDR-TB | lineage4.3.4.2 | None | ERR275222 | MDR-TB | lineage4.3.4.2 | pt | ERR275211 | MDR-TB | lineage4.3.4.2 | pt | ERR275212 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR117676 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR275229 | MDR-TB | lineage4.3.4.2 | pt | ERR1034676 | MDR-TB | lineage4.1.2.1 | co | ERR1664644 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664658 | MDR-TB | lineage4.3.4.2 | None | ERR1664649 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664659 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664641 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2864239 | MDR-TB | lineage4.3.4.2 | pt | ERR2864288 | MDR-TB | lineage4.3.4.2 | pt | ERR2864218 | MDR-TB | lineage4.3.4.2 | pt | ERR2864225 | XDR-TB | lineage4.3.4.2 | pt | ERR2864250 | MDR-TB | lineage4.3.4.2 | pt | ERR2864283 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2864253 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR551308 | HR-TB | lineage2.2.1 | None | SRR6511637 | XDR-TB | lineage4.3.4.2 | None | ERR551159 | MDR-TB | lineage2.2.1 | uz | SAMEA2533849 | MDR-TB | lineage2.2.1 | uz | SAMEA2534248 | Pre-XDR-TB | lineage2.2.1 | uz | SAMEA2534416 | MDR-TB | lineage2.2.1 | uz | ERR400553 | MDR-TB | lineage4.3.4.2 | gb | SRR2100239 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR2100389 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR2513944 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR1036291 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1036293 | MDR-TB | lineage4.3.4.2 | pt | ERR1035176 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035186 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035187 | MDR-TB | lineage4.3.4.2 | pt | ERR1035194 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035203 | MDR-TB | lineage4.3.4.2 | pt | SRR29539400 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034823 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034835 | MDR-TB | lineage4.3.4.2 | pt | ERR1034844 | MDR-TB | lineage4.3.4.2 | pt | ERR278536 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR1036282 | MDR-TB | lineage4.3.4.2 | pt | SRR21690907 | MDR-TB | lineage4.2.2 | None | ERR1213924 | MDR-TB | lineage4.3.4.2 | pt | ERR552105 | MDR-TB | lineage2.2.1 | None | ERR10869097 | MDR-TB | lineage4.3.3 | None | ERR1664633 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR28045579 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600441 | MDR-TB | lineage2.2.1 | None | SRR18714833 | MDR-TB | lineage2.2.1 | None | DRR130056 | MDR-TB | lineage4.1.1.3 | None | ERR1036284 | MDR-TB | lineage4.3.4.2 | pt | ERR1664624 | MDR-TB | lineage4.3.4.2 | None | SRR10305655 | MDR-TB | lineage2.2.1 | None | ERR10969172 | MDR-TB | lineage4.3.4.2 | None | ERR13253294 | MDR-TB | lineage4.1.1.3 | None | ERR11043215 | MDR-TB | lineage4.3.4.2 | None | ERR351924 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR7453035 | MDR-TB | lineage4.3.4.2 | None | ERR551305 | MDR-TB | lineage2.2.1 | None | ERR551862 | Pre-XDR-TB | lineage2.2.1 | None | ERR1815554 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR13285125 | MDR-TB | lineage4.3.4.2 | None | ERR1035237 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR14088379 | MDR-TB | lineage3 | None | ERR275184 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR275207 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR275217 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR275219 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR275224 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR275227 | MDR-TB | lineage4.3.4.2 | pt | ERR4822341 | MDR-TB | lineage4.1.1.3 | jp | ERR13193944 | Other | lineage4.9 | None | ERR1227527 | MDR-TB | lineage4.3.4.2 | None | SRR30659137 | Other | lineage4.9 | None | ERR1664623 | MDR-TB | lineage4.3.4.2 | None | ERR1664629 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664651 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664661 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664648 | MDR-TB | lineage4.3.4.2 | None | ERR2864284 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR7764396 | Pre-XDR-TB | lineage4.3.4.2 | None |
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