lineage | Count |
---|---|
lineage4.1.2.1 | 16 |
lineage2.2.1 | 16 |
lineage3 | 13 |
lineage3.1.1 | 12 |
lineage2.2.2 | 6 |
lineage4.6.4 | 1 |
lineage4.1.2.1;lineage4.3.3 | 1 |
lineage4.1.3 | 1 |
lineage4.6.5 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 68 |
ID | Drug resistance | Lineage | Country iso2 | ERR751632 | MDR-TB | lineage4.1.2.1 | pe | SRR6832497 | MDR-TB | lineage2.2.1 | None | ERR2516549 | Pre-XDR-TB | lineage3 | nl | SRR28858380 | MDR-TB | lineage3.1.1 | None | SRR21887761 | Pre-XDR-TB | lineage2.2.1 | None | SRR29289128 | MDR-TB | lineage3 | None | SRR29539322 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813359 | MDR-TB | lineage4.1.2.1 | None | SRR29539308 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822289 | MDR-TB | lineage3.1.1 | None | SRR28119785 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370466 | MDR-TB | lineage4.1.2.1 | None | ERR13291072 | MDR-TB | lineage2.2.1 | None | SRR22528546 | MDR-TB | lineage4.1.2.1 | None | SRR3082092 | MDR-TB | lineage3.1.1 | None | ERR3287623 | MDR-TB | lineage2.2.1 | pe | ERR4828684 | HR-TB | lineage2.2.2 | vn | SRR5818636 | MDR-TB | lineage3.1.1 | dj | ERR13292582 | MDR-TB | lineage3 | None | SRR22536483 | MDR-TB | lineage4.1.2.1 | None | SRR3082081 | MDR-TB | lineage3.1.1 | None | SRR29050941 | HR-TB | lineage2.2.2 | None | SRR3085335 | MDR-TB | lineage3.1.1 | None | SRR28119845 | Pre-XDR-TB | lineage2.2.1 | None | SRR29289332 | Pre-XDR-TB | lineage3 | None | ERR4797402 | Pre-XDR-TB | lineage3 | in | ERR4812594 | MDR-TB | lineage4.1.2.1 | pe | ERR4819736 | Pre-XDR-TB | lineage3 | gb | ERR4813157 | Pre-XDR-TB | lineage2.2.1 | None | SRR5065580 | Other | lineage2.2.2 | vn | SRR11444133 | Other | lineage4.6.4 | None | ERR779924 | MDR-TB | lineage4.1.2.1 | pe | ERR4813285 | MDR-TB | lineage4.1.2.1 | pe | ERR751577 | MDR-TB | lineage4.1.2.1 | pe | ERR4813700 | MDR-TB | lineage4.1.2.1;lineage4.3.3 | None | SRR28393267 | MDR-TB | lineage4.1.2.1 | None | ERR7910892 | MDR-TB | lineage4.1.2.1 | pe | ERR4822582 | Other | lineage2.2.1 | None | SRR1710096 | MDR-TB | lineage2.2.1 | cn | ERR12860985 | MDR-TB | lineage3 | None | SRR6964569 | Pre-XDR-TB | lineage3 | None | SRR5067716 | Other | lineage2.2.2 | vn | SRR3724802 | MDR-TB | lineage4.1.3 | None | ERR4828693 | HR-TB | lineage2.2.2 | vn | ERR4829093 | MDR-TB | lineage3.1.1 | dj | SRR7070080 | Pre-XDR-TB | lineage3 | None | ERR4276852 | MDR-TB | lineage3.1.1 | None | ERR779920 | MDR-TB | lineage4.1.2.1 | pe | SRR22536494 | MDR-TB | lineage4.1.2.1 | None | ERR4829101 | MDR-TB | lineage3.1.1 | dj | SRR29016754 | HR-TB | lineage2.2.2 | None | ERR13276011 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813397 | MDR-TB | lineage4.1.2.1 | pe | SRR21887787 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046512 | MDR-TB | lineage3 | gb | ERR13290032 | MDR-TB | lineage3 | None | ERR2120248 | MDR-TB | lineage4.6.5 | None | ERR3273089 | MDR-TB | lineage4.5 | None | SRR29289414 | XDR-TB | lineage3 | None | ERR3077941 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393999 | MDR-TB | lineage4.1.2.1 | None | SRR5818617 | MDR-TB | lineage3.1.1 | dj | ERR13276225 | MDR-TB | lineage3.1.1 | None | ERR2513160 | Pre-XDR-TB | lineage3 | gb | ERR11044215 | MDR-TB | lineage3.1.1 | None | ERR4828084 | MDR-TB | lineage2.2.1 | None | ERR3287773 | MDR-TB | lineage4.1.2.1 | pe | SRR29681317 | Pre-XDR-TB | lineage2.2.1 | None |
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