lineage | Count |
---|---|
lineage2.2.1 | 78 |
lineage3.1.1 | 8 |
lineage3 | 2 |
lineage4.8 | 11 |
lineage2.2.2 | 2 |
lineage4.3.3 | 10 |
lineage4.9 | 1 |
lineage2.2.1;lineage4.2.1 | 1 |
lineage1.2.2.2 | 1 |
lineage4.6.5 | 3 |
lineage4.3.4.2 | 4 |
lineage4.6.1.2 | 2 |
lineage4.1.1.1 | 2 |
1 | |
lineage4.2.1 | 2 |
lineage4.2.2.2 | 1 |
lineage1.1.2;lineage3.1.1 | 1 |
lineage4.1.4 | 1 |
lineage4.5 | 2 |
lineage4.1.2.1 | 1 |
lineage3.1.1;lineage4.2.2.2 | 2 |
lineage3.1.2 | 1 |
spoligotype | Count |
---|---|
None | 137 |
ID | Drug resistance | Lineage | Country iso2 | ERR015614 | MDR-TB | lineage2.2.1 | ru | ERR7911749 | MDR-TB | lineage2.2.1 | us | ERR11082132 | MDR-TB | lineage2.2.1 | None | SRR24256156 | Pre-XDR-TB | lineage2.2.1 | None | SRR23861790 | MDR-TB | lineage2.2.1 | None | ERR4830883 | MDR-TB | lineage3.1.1 | None | ERR2510294 | Pre-XDR-TB | lineage3 | pk | SRR16087930 | MDR-TB | lineage2.2.1 | None | ERR551528_ERR551527 | MDR-TB | lineage2.2.1 | None | ERR3148180 | MDR-TB | lineage2.2.1 | mx | ERR3078016 | MDR-TB | lineage3.1.1 | None | ERR1023416 | MDR-TB | lineage2.2.1 | None | ERR13261495 | Pre-XDR-TB | lineage4.8 | None | ERR5866432 | RR-TB | lineage2.2.1 | None | SRR1166816 | MDR-TB | lineage2.2.1 | None | ERR5864634 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737767 | MDR-TB | lineage2.2.2 | None | ERR13284725 | MDR-TB | lineage4.3.3 | None | ERR5864636 | MDR-TB | lineage2.2.1 | None | ERR13261338 | Pre-XDR-TB | lineage4.8 | None | SAMN02414937 | MDR-TB | lineage2.2.1 | se | SRR1165546 | MDR-TB | lineage2.2.1 | None | SRR5818412 | MDR-TB | lineage4.9 | None | ERR067642 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR234644 | Pre-XDR-TB | lineage2.2.1 | ru | SRR10430356 | MDR-TB | lineage2.2.1 | None | ERR3276267 | MDR-TB | lineage2.2.1 | nl | SRR29017065 | MDR-TB | lineage1.2.2.2 | None | ERR144595 | Pre-XDR-TB | lineage2.2.1 | ru | ERR5866433 | RR-TB | lineage2.2.1 | None | ERR3078017 | MDR-TB | lineage3.1.1 | None | ERR13290516 | MDR-TB | lineage2.2.1 | None | SRR3082076 | MDR-TB | lineage4.6.5 | None | SRR23340059 | Pre-XDR-TB | lineage4.3.3 | None | ERR2815361 | MDR-TB | lineage4.3.4.2 | None | SRR23340035 | Pre-XDR-TB | lineage4.3.3 | None | ERR6358778 | MDR-TB | lineage4.6.1.2 | None | ERR13290515 | MDR-TB | lineage2.2.1 | None | ERR551528 | MDR-TB | lineage2.2.1 | None | ERR5864632 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864626 | MDR-TB | lineage2.2.1 | None | SRR18715414 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866336 | MDR-TB | lineage2.2.1 | None | SRR23861852 | MDR-TB | lineage2.2.1 | None | ERR3077964 | MDR-TB | lineage3.1.1 | None | ERR5866335 | MDR-TB | lineage2.2.1 | None | ERR5864629 | Pre-XDR-TB | lineage2.2.1 | None | SRR10397160 | MDR-TB | lineage2.2.1 | None | SRR25905990 | MDR-TB | lineage4.3.3 | None | SRR10397101 | Pre-XDR-TB | lineage2.2.1 | None | ERR1555051 | MDR-TB | lineage4.1.1.1 | None | SRR1165521 | MDR-TB | lineage2.2.1 | None | SRR6832627 | MDR-TB | lineage2.2.1 | None | SRR29772471 | Pre-XDR-TB | lineage4.8 | None | SRR22048286 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303279 | MDR-TB | lineage2.2.1 | None | ERR2516712 | MDR-TB | lineage4.6.1.2 | None | ERR4797823 | Pre-XDR-TB | lineage4.8 | in | SRR5818574 | MDR-TB | lineage4.6.5 | dj | ERR13261138 | Pre-XDR-TB | lineage4.8 | None | SRR16370492 | MDR-TB | lineage4.3.4.2 | None | ERR4831487 | Pre-XDR-TB | lineage3 | None | ERR2516955 | Pre-XDR-TB | lineage4.3.3 | gb | SRR28045655 | Pre-XDR-TB | lineage4.8 | None | ERR4553425 | HR-TB | None | ERR067677 | MDR-TB | lineage4.2.1 | ru | ERR4797094 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR28706385 | MDR-TB | lineage4.3.3 | None | ERR7975688 | MDR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR29539214 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864633 | MDR-TB | lineage2.2.1 | None | ERR4596934 | MDR-TB | lineage1.1.2;lineage3.1.1 | None | ERR2516434 | MDR-TB | lineage4.1.4 | pe | ERR5864635 | MDR-TB | lineage2.2.1 | None | ERR5866337 | MDR-TB | lineage2.2.1 | None | ERR7910869 | MDR-TB | lineage4.3.4.2 | pe | SRR26937073 | MDR-TB | lineage4.5 | None | SRR10397211 | MDR-TB | lineage2.2.1 | None | SRR29681366 | MDR-TB | lineage4.3.3 | None | ERR027456 | MDR-TB | lineage2.2.1 | ru | SRR1162749 | MDR-TB | lineage2.2.1 | None | ERR4799263 | Pre-XDR-TB | lineage4.1.2.1 | in | ERR3077965 | MDR-TB | lineage3.1.1 | None | SAMEA2534002 | MDR-TB | lineage2.2.1 | uz | ERR3077956 | MDR-TB | lineage3.1.1 | None | ERR551527 | MDR-TB | lineage2.2.1 | None | ERR13191096 | MDR-TB | lineage2.2.1 | None | ERR5864631 | Pre-XDR-TB | lineage2.2.1 | None | ERR11775964 | MDR-TB | lineage4.5 | None | ERR3077998 | MDR-TB | lineage3.1.1;lineage4.2.2.2 | None | ERR137247 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4799641 | Pre-XDR-TB | lineage4.8 | in | ERR5864628 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305652 | MDR-TB | lineage2.2.1 | None | ERR5864630 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938625 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303999 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798189 | Pre-XDR-TB | lineage4.8 | in | ERR4811111 | Pre-XDR-TB | lineage2.2.1 | cn | SRR24255876 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081443 | MDR-TB | lineage4.3.3 | None | ERR2512467 | MDR-TB | lineage2.2.1 | gb | ERR3077930 | MDR-TB | lineage3.1.1 | None | DRR130164 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710115 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794480 | MDR-TB | lineage2.2.1 | None | ERR2517040 | Pre-XDR-TB | lineage4.3.3 | gb | SRR26937020 | MDR-TB | lineage2.2.1 | None | SRR29772584 | Pre-XDR-TB | lineage4.8 | None | ERR5864627 | MDR-TB | lineage2.2.1 | None | SRR7516296 | Pre-XDR-TB | lineage2.2.1 | None | SRR23861877 | MDR-TB | lineage2.2.1 | None | SRR23861951 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887643 | MDR-TB | lineage2.2.2 | None | ERR4827722 | MDR-TB | lineage2.2.1 | None | SRR28351361 | Pre-XDR-TB | lineage4.8 | None | SRR28706641 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290514 | MDR-TB | lineage2.2.1 | None | SRR29772711 | MDR-TB | lineage3.1.2 | None | ERR2120265 | MDR-TB | lineage4.6.5 | None | SRR29051331 | HR-TB | lineage4.3.4.2 | None | SRR29539372 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653120 | MDR-TB | lineage4.1.1.1 | None | SRR21277866 | MDR-TB | lineage2.2.1 | None | ERR4827548 | MDR-TB | lineage2.2.1 | None | ERR4596935 | MDR-TB | lineage3.1.1 | None | ERR4820776 | Pre-XDR-TB | lineage4.8 | gb | SRR25206994 | Pre-XDR-TB | lineage2.2.1 | None | ERR12790857 | MDR-TB | lineage2.2.1 | None | SRR24709916 | MDR-TB | lineage2.2.1 | None | ERR067644 | Pre-XDR-TB | lineage2.2.1 | ru | ERR117464 | Pre-XDR-TB | lineage2.2.1 | ru | ERR144598 | HR-TB | lineage4.2.1 | ru | SRR15368899 | MDR-TB | lineage2.2.1 | None | ERR3077963 | MDR-TB | lineage3.1.1;lineage4.2.2.2 | None | SRR29539511 | Pre-XDR-TB | lineage4.3.3 | None |
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