Rv2043c - p.Val7Ala
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
0 HR-TB
13 MDR-TB
96 Pre-XDR-TB
6 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 92 |
| lineage4.3.4.2 | 5 |
| lineage2.2.2 | 1 |
| lineage3 | 5 |
| lineage4.6.1.1 | 2 |
| lineage2.2.1.1 | 3 |
| lineage4.1.1.3 | 5 |
| lineage4.1.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 116 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3544729 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081405 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863921 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710174 | Pre-XDR-TB | lineage2.2.1 | None | SRR5266539 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864531 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864532 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863933 | Pre-XDR-TB | lineage2.2.1 | None | SRR13312546 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864533 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864540 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863920 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707207 | MDR-TB | lineage4.3.4.2 | cd | ERR7911407 | Pre-XDR-TB | lineage2.2.1 | us | SRR6824561 | MDR-TB | lineage2.2.1 | cn | SRR6257033 | Pre-XDR-TB | lineage2.2.1 | ru | SRR29231865 | MDR-TB | lineage4.3.4.2 | None | SRR13232658 | Pre-XDR-TB | lineage2.2.1 | None | SRR13312545 | Pre-XDR-TB | lineage2.2.1 | None | SRR5761429 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865295 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887709 | Pre-XDR-TB | lineage2.2.2 | None | ERR5863937 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017075 | XDR-TB | lineage3 | None | SRR18714946 | MDR-TB | lineage4.3.4.2 | None | ERR6358846 | MDR-TB | lineage4.6.1.1 | None | ERR5863916 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231755 | MDR-TB | lineage4.3.4.2 | None | SRR29539649 | Pre-XDR-TB | lineage2.2.1 | None | ERR12307396 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539020 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863924 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864541 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424759 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082449 | Pre-XDR-TB | lineage2.2.1 | None | SRR7517736 | Pre-XDR-TB | lineage2.2.1 | None | SRR7517722 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863922 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539586 | MDR-TB | lineage2.2.1 | None | ERR5864539 | Pre-XDR-TB | lineage2.2.1 | None | SRR3544743 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863936 | Pre-XDR-TB | lineage2.2.1 | None | SRR5266560 | Pre-XDR-TB | lineage2.2.1 | None | SRR13312518 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863926 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864534 | Pre-XDR-TB | lineage2.2.1 | None | SRR5152909 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863923 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773810 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863928 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773789 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866277 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707160 | MDR-TB | lineage4.3.4.2 | cd | ERR7911385 | Pre-XDR-TB | lineage2.2.1 | us | SRR21887711 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864535 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516577 | MDR-TB | lineage2.2.1.1 | nl | SRR29539082 | XDR-TB | lineage2.2.1 | None | ERR5863919 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173815 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR5863931 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863918 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865293 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863927 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866275 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773806 | Pre-XDR-TB | lineage2.2.1 | None | ERR9121747 | Pre-XDR-TB | lineage2.2.1 | None | ERR13112017 | XDR-TB | lineage3 | None | SRR16088475 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017104 | XDR-TB | lineage3 | None | SRR13312520 | Pre-XDR-TB | lineage2.2.1 | None | ERR13262148 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864536 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863917 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539310 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864537 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539017 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863930 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173718 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR15465758 | MDR-TB | lineage2.2.1 | None | ERR5863939 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863925 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863934 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044747 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266784 | MDR-TB | lineage2.2.1.1 | None | ERR10762320 | Pre-XDR-TB | lineage2.2.1 | None | ERR4195619 | Pre-XDR-TB | lineage2.2.1 | None | SRR13312544 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863935 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358847 | MDR-TB | lineage4.6.1.1 | None | ERR5864530 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865296 | Pre-XDR-TB | lineage2.2.1 | None | SRR13312517 | Pre-XDR-TB | lineage2.2.1 | None | ERR11083165 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165298 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR13312519 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863929 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865292 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866276 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02403510 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR1167309 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10762321 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798559 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864538 | Pre-XDR-TB | lineage2.2.1 | None | ERR10680015 | RR-TB | lineage4.1.2.1 | None | SRR29017560 | XDR-TB | lineage3 | None | ERR13112016 | XDR-TB | lineage3 | None | SRR7645885 | Pre-XDR-TB | lineage4.2.1 | None | ERR5864529 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516416 | MDR-TB | lineage2.2.1.1 | None | ERR5865294 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863932 | Pre-XDR-TB | lineage2.2.1 | None | SRR22536493 | Pre-XDR-TB | lineage4.3.2 | None | SRR7516321 | Pre-XDR-TB | lineage2.2.1 | None | SRR10397096 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863938 | Pre-XDR-TB | lineage2.2.1 | None |
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