lineage | Count |
---|---|
lineage4.6.2.2 | 2 |
lineage2.2.1 | 15 |
lineage2.2.1.1 | 1 |
lineage2.2.2 | 3 |
lineage4.2.2.2 | 2 |
lineage2.2 | 2 |
lineage4.3.3;lineage3 | 1 |
lineage4.4.1.1 | 1 |
lineage4.4.1.1;lineage4.3.3 | 2 |
lineage4.5 | 1 |
lineage4;lineage2.2.1 | 1 |
lineage4.1.1 | 1 |
lineage4.1.2.1 | 2 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 35 |
ID | Drug resistance | Lineage | Country iso2 | ERR9119493 | MDR-TB | lineage4.6.2.2 | None | SRR15723174 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305625 | MDR-TB | lineage2.2.1 | None | SRR11972362 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR20632779 | Pre-XDR-TB | lineage2.2.2 | None | SRR20632807 | Pre-XDR-TB | lineage2.2.2 | None | SRR22175226 | XDR-TB | lineage4.2.2.2 | None | SRR23938594 | MDR-TB | lineage2.2.1 | None | ERR4827456 | MDR-TB | lineage2.2.1 | None | SRR1723549 | MDR-TB | lineage2.2.1 | cn | SRR23311027 | MDR-TB | lineage2.2 | None | ERR2433010 | Other | lineage4.3.3;lineage3 | br | SRR2024922 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4830161 | MDR-TB | lineage2.2.1 | None | ERR4830593 | MDR-TB | lineage2.2.1 | tm | SRR8433213 | Pre-XDR-TB | lineage2.2.1 | None | ERR4972499 | MDR-TB | lineage4.4.1.1 | None | ERR4972575 | XDR-TB | lineage4.4.1.1;lineage4.3.3 | None | SRR671850 | MDR-TB | lineage4.5 | cn | SRR6824304 | MDR-TB | lineage4;lineage2.2.1 | cn | SRR8354461 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257091 | MDR-TB | lineage2.2.1 | None | SRR8380932 | MDR-TB | lineage2.2.1 | in | ERR2935863 | MDR-TB | lineage4.1.1 | None | ERR4872087 | MDR-TB | lineage4.6.2.2 | None | ERR4972534 | XDR-TB | lineage4.4.1.1;lineage4.3.3 | None | SRR8363797 | Pre-XDR-TB | lineage2.2.1 | None | SRR8651653 | Pre-XDR-TB | lineage2.2 | cn | SRR8651641 | Pre-XDR-TB | lineage2.2.2 | cn | ERR3273203 | MDR-TB | lineage4.1.2.1 | None | ERR10680210 | RR-TB | lineage4.1.2.1 | None | ERR3794538 | MDR-TB | lineage2.2.1 | None | ERR4799186 | MDR-TB | lineage4.2.2.2 | in | ERR5865980 | MDR-TB | lineage4.2.1 | None | ERR5865912 | MDR-TB | lineage2.2.1 | None |
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