Rv2428 - c.-52C>A
Drug resistance types
4 Sensitive
14 RR-TB
26 HR-TB
90 MDR-TB
9 Pre-XDR-TB
10 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 87 |
| lineage4.1.2.1 | 6 |
| lineage4.5 | 6 |
| lineage4.9 | 1 |
| lineage2.2.1 | 24 |
| lineage2.2 | 1 |
| lineage4.8 | 3 |
| lineage2.2.1.1 | 1 |
| lineage4.6.1.2 | 10 |
| lineage1.1.2 | 1 |
| lineage4.6.1.1 | 6 |
| lineage5 | 1 |
| lineage4.3 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage4.4.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 156 |
Geographic prevalence
Country level data for this variant is available for 72 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11082091 | MDR-TB | lineage4 | None | ERR11068567 | HR-TB | lineage4.1.2.1 | None | ERR4813465 | HR-TB | lineage4 | pe | ERR4813306 | MDR-TB | lineage4 | pe | SAMN02414867 | RR-TB | lineage4.5 | se | ERR4812772 | MDR-TB | lineage4 | pe | ERR4812883 | MDR-TB | lineage4.9 | pe | ERR4813115 | MDR-TB | lineage4 | None | ERR2229579 | Sensitive | lineage4 | None | ERR4813495 | HR-TB | lineage4 | None | ERR4813549 | MDR-TB | lineage4 | None | ERR4813603 | MDR-TB | lineage4 | None | SRR2024904 | MDR-TB | lineage2.2.1 | cn | ERR551196 | MDR-TB | lineage2.2.1 | de | SRR1723592 | RR-TB | lineage2.2.1 | None | ERR2510535 | Pre-XDR-TB | lineage2.2 | pk | SAMEA2534052 | MDR-TB | lineage4.8 | uz | SAMEA2533704 | MDR-TB | lineage4.1.2.1 | uz | ERR2510175 | MDR-TB | lineage4 | pe | ERR2516357 | MDR-TB | lineage4.8 | be | ERR2510234 | MDR-TB | lineage4 | pe | ERR2516548 | MDR-TB | lineage4 | pe | ERR2516503 | XDR-TB | lineage4 | pe | ERR2515647 | RR-TB | lineage2.2.1.1 | za | ERR2516414 | MDR-TB | lineage4 | pe | ERR2516458 | MDR-TB | lineage4 | pe | ERR2516472 | MDR-TB | lineage4 | pe | ERR2516509 | MDR-TB | lineage4 | pe | ERR2516541 | XDR-TB | lineage4 | pe | ERR2041765 | MDR-TB | lineage4.1.2.1 | rs | ERR2516650 | XDR-TB | lineage4 | pe | ERR2516678 | MDR-TB | lineage4 | pe | ERR2707198 | MDR-TB | lineage4.6.1.2 | cd | ERR2707129 | MDR-TB | lineage4.6.1.2 | cd | ERR2707200 | MDR-TB | lineage4.6.1.2 | cd | ERR2707008 | MDR-TB | lineage4.6.1.2 | cd | SRR6785277 | HR-TB | lineage2.2.1 | None | ERR2707183 | MDR-TB | lineage4.6.1.2 | cd | ERR4829954 | Pre-XDR-TB | lineage1.1.2 | None | ERR3148043 | MDR-TB | lineage4.8 | None | ERR4872112 | RR-TB | lineage4.6.1.2 | None | ERR4827755 | HR-TB | lineage2.2.1 | None | SRR671869 | MDR-TB | lineage2.2.1 | cn | SRR6824654 | MDR-TB | lineage2.2.1 | cn | SRR6824442 | RR-TB | lineage2.2.1 | cn | SRR1723442 | HR-TB | lineage2.2.1 | cn | SAMN02381021 | HR-TB | lineage4.6.1.1 | ug | SRR1723443 | HR-TB | lineage2.2.1 | cn | ERR1034755 | MDR-TB | lineage4 | pe | DRR188526 | Other | lineage2.2.1 | None | DRR130114 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034756 | HR-TB | lineage4 | pe | ERR1034737 | MDR-TB | lineage4 | pe | ERR10680152 | RR-TB | lineage5 | None | ERR3287360 | MDR-TB | lineage4 | pe | ERR1199112 | MDR-TB | lineage4.6.1.2 | cd | ERR3273118 | MDR-TB | lineage4.3 | None | ERR3256211 | HR-TB | lineage1.2.1.2.1 | ph | ERR3287555 | MDR-TB | lineage4 | None | ERR3287443 | MDR-TB | lineage4 | pe | ERR3287445 | MDR-TB | lineage4 | pe | ERR3287473 | HR-TB | lineage4 | pe | ERR3287527 | MDR-TB | lineage4 | None | ERR3287449 | XDR-TB | lineage4 | None | ERR3287505 | MDR-TB | lineage4 | None | ERR3287536 | MDR-TB | lineage4 | None | ERR3287558 | MDR-TB | lineage4 | None | ERR3287557 | MDR-TB | lineage4 | None | ERR3287696 | MDR-TB | lineage4 | pe | ERR3287597 | MDR-TB | lineage4 | pe | ERR4024944 | MDR-TB | lineage4 | None | ERR3287791 | MDR-TB | lineage4 | pe | ERR3287846 | XDR-TB | lineage4 | pe | ERR3287864 | MDR-TB | lineage4 | pe | ERR3287721 | MDR-TB | lineage4 | pe | ERR4024541 | HR-TB | lineage4 | None | ERR4457776 | MDR-TB | lineage4 | None | ERR4025041 | MDR-TB | lineage4 | None | ERR4025071 | MDR-TB | lineage4 | None | ERR4178215 | HR-TB | lineage4 | None | ERR4178287 | MDR-TB | lineage4 | None | ERR4457792 | HR-TB | lineage4 | None | ERR4457811 | MDR-TB | lineage4 | None | ERR4457805 | MDR-TB | lineage4 | None | ERR4811357 | Pre-XDR-TB | lineage4.5 | None | ERR4457843 | MDR-TB | lineage4 | None | ERR4810760 | Sensitive | lineage4.5 | cn | ERR4457819 | HR-TB | lineage4 | None | ERR4457827 | MDR-TB | lineage4 | None | ERR4457861 | MDR-TB | lineage4 | None | ERR4811305 | RR-TB | lineage4.5 | cn | ERR4811891 | Other | lineage4.1.2.1 | None | ERR4811476 | Sensitive | lineage4.4.2 | cn | ERR4811872 | HR-TB | lineage4 | pe | ERR6336710 | RR-TB | lineage1.2.1.2.1 | None | ERR4812060 | HR-TB | lineage4 | pe | ERR4812485 | XDR-TB | lineage4 | pe | ERR4812681 | MDR-TB | lineage4 | pe | ERR7339052 | MDR-TB | lineage4 | None | ERR6359013 | MDR-TB | lineage4.6.1.2 | None | ERR6358776 | MDR-TB | lineage4.6.1.2 | None | ERR6358835 | RR-TB | lineage4.6.1.1 | None | ERR751447 | MDR-TB | lineage4 | pe | ERR751411 | MDR-TB | lineage4 | pe | ERR7339051 | MDR-TB | lineage4 | None | ERR751356 | MDR-TB | lineage4 | pe | ERR751414 | MDR-TB | lineage4 | None | ERR751478 | MDR-TB | lineage4 | pe | ERR751452 | XDR-TB | lineage4 | pe | ERR751465 | MDR-TB | lineage4 | pe | ERR751521 | MDR-TB | lineage4 | pe | ERR751488 | MDR-TB | lineage4 | pe | ERR751540 | MDR-TB | lineage4 | pe | ERR751531 | MDR-TB | lineage4 | pe | ERR751526 | MDR-TB | lineage4 | pe | ERR779923 | MDR-TB | lineage4 | pe | ERR7737734 | MDR-TB | lineage2.2.1 | None | ERR775321 | MDR-TB | lineage4 | pe | ERR779883 | MDR-TB | lineage4 | pe | ERR751620 | XDR-TB | lineage4 | pe | ERR7910889 | MDR-TB | lineage4 | None | ERR11050013 | HR-TB | lineage4.1.2.1 | None | ERR7910890 | MDR-TB | lineage4 | None | SRR1049646 | HR-TB | lineage4.6.1.1 | None | ERR8773927 | HR-TB | lineage2.2.1 | None | ERR9029844 | MDR-TB | lineage4 | None | ERR9029867 | XDR-TB | lineage4 | None | SRR10306032 | MDR-TB | lineage2.2.1 | None | SRR1049647 | HR-TB | lineage4.6.1.1 | None | ERR8773928 | HR-TB | lineage2.2.1 | None | ERR8975554 | HR-TB | lineage4.4.1.1 | None | ERR9029870 | MDR-TB | lineage4 | None | ERR9119518 | RR-TB | lineage4.6.1.2 | None | ERR11050265 | HR-TB | lineage4.1.2.1 | None | SRR1062911 | HR-TB | lineage4.6.1.1 | None | SRR1144804 | MDR-TB | lineage4;lineage2.2 | None | SRR1140588 | HR-TB | lineage4.6.1.1 | None | SRR1144747 | RR-TB | lineage4 | None | SRR1146278 | MDR-TB | lineage4;lineage2.2.1 | None | SRR1146312 | RR-TB | lineage4 | None | SRR1163300 | MDR-TB | lineage4 | None | SRR1163141 | MDR-TB | lineage4 | None | SRR1163229 | RR-TB | lineage4.5 | None | SRR1163408 | RR-TB | lineage4.5 | None | SRR13870364 | XDR-TB | lineage4 | None | SRR13423583 | Pre-XDR-TB | lineage2.2.1 | None | SRR13583511 | Sensitive | lineage4.1.1 | None | SRR13423584 | Pre-XDR-TB | lineage2.2.1 | None | SRR18054804 | MDR-TB | lineage2.2.1 | None | SRR15316314 | MDR-TB | lineage2.2.1 | None | SRR17234892 | MDR-TB | lineage4 | None | SRR17729372 | Other | lineage2.2.1 | None | SRR20632806 | Pre-XDR-TB | lineage2.2.1 | None | SRR18665458 | MDR-TB | lineage4.1.1.3 | None | SRR20632777 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632824 | Pre-XDR-TB | lineage2.2.1 | None |
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