Rv2428 - c.-76T>A

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
5 Sensitive 5 RR-TB 15 HR-TB 54 MDR-TB 45 Pre-XDR-TB 1 XDR-TB 5 Other
lineage Counts
lineage Count
lineage3 110
lineage2.2.1;lineage3 5
3
lineage3.1.2.2 1
lineage3.1.2 5
lineage3.1.1 1
lineage2.2;lineage3 1
lineage3.1 1
lineage3.1.2.1 2
lineage1.1.2;lineage3 1
spoligotype Counts
spoligotype Count
None 130
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3470661 MDR-TB lineage3 None
SRR3105747 Other lineage3 None
SRR3105768 Pre-XDR-TB lineage3 None
SRR1049608 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR4553403 MDR-TB None
ERR046730 HR-TB lineage3.1.2.2 gb
SRR6485060 HR-TB lineage3 None
SRR2099977 HR-TB lineage3 None
ERR3148177 Pre-XDR-TB lineage3 mx
ERR2513872 Pre-XDR-TB lineage3 gb
ERR2513954 Pre-XDR-TB lineage3 gb
SRR6046888 MDR-TB lineage3 gb
SRR5341378 Other lineage3 in
SRR5341431 Sensitive lineage3 in
SRR1140589 Pre-XDR-TB lineage3 None
SRR29772434 RR-TB lineage3 None
ERR4821955 Pre-XDR-TB lineage3 None
SRR1167099 MDR-TB lineage3 None
SRR7517730 MDR-TB lineage3 None
SRR25827807 Pre-XDR-TB lineage3.1.2 None
SRR18593219 Pre-XDR-TB lineage3 None
SRR25340986 Sensitive lineage3 None
SRR7070665 HR-TB lineage3 None
ERR4800096 Pre-XDR-TB lineage3 None
ERR4829131 Pre-XDR-TB lineage3 pk
SRR28351453 Other lineage3 None
ERR4596897 MDR-TB lineage3.1.1 None
ERR13284864 MDR-TB lineage3 None
ERR13273085 HR-TB lineage3 None
ERR13290518 MDR-TB lineage3 None
ERR4423629 Pre-XDR-TB lineage3 None
ERR3470677 MDR-TB lineage3 None
SRR1166804 MDR-TB lineage3 None
ERR3470675 MDR-TB lineage3 None
ERR3470687 MDR-TB lineage3 None
ERR3470662 MDR-TB lineage3 None
ERR13290521 MDR-TB lineage3 None
ERR3470670 MDR-TB lineage3 None
SRR29231113 Pre-XDR-TB lineage3 None
ERR3335781 Pre-XDR-TB lineage3 pk
ERR2510441 Pre-XDR-TB lineage3 pk
ERR2510611 Pre-XDR-TB lineage3 pk
ERR2510639 Pre-XDR-TB lineage3 pk
SRR28045832 MDR-TB lineage3 None
ERR16022291 MDR-TB lineage3 None
SRR29016858 Pre-XDR-TB lineage3 None
ERR4796963 MDR-TB lineage3 in
ERR4799871 MDR-TB lineage3 in
ERR4799908 Pre-XDR-TB lineage3 in
ERR3470700 MDR-TB lineage3 None
ERR4799903 Pre-XDR-TB lineage3.1.2 in
SRR27450106 MDR-TB lineage3 None
SAMN02381049 Pre-XDR-TB lineage3 ug
SRR1140625 Pre-XDR-TB lineage3 None
ERR4830754 Pre-XDR-TB lineage3 ir
SRR1173800 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR4814494 Pre-XDR-TB lineage3 gb
ERR4820325 MDR-TB lineage3 gb
ERR270687 HR-TB lineage3 None
SRR29772607 RR-TB lineage3 None
SRR25340869 Sensitive lineage3 None
ERR3470702 MDR-TB lineage3 None
SRR3105753 MDR-TB lineage3 None
ERR3470664 MDR-TB lineage3 None
ERR11081078 MDR-TB lineage3 None
ERR4553494 Pre-XDR-TB None
SRR1049734 Pre-XDR-TB lineage3 None
ERR6397206 MDR-TB lineage3 None
SRR21690982 HR-TB lineage3 None
SRR1165369 MDR-TB lineage3 None
ERR6397205 MDR-TB lineage3 None
SRR22424792 Pre-XDR-TB lineage3.1.2 None
ERR3275881 HR-TB lineage3 nl
ERR3470667 MDR-TB lineage3 None
ERR4799538 Pre-XDR-TB lineage3 None
SRR29017390 MDR-TB lineage3 None
SRR1049607 Pre-XDR-TB lineage2.2.1;lineage3 None
SRR29017050 MDR-TB lineage3 None
SRR1062932 Pre-XDR-TB lineage3 None
SRR22424929 MDR-TB lineage3 None
ERR13290519 MDR-TB lineage3 None
ERR13289721 MDR-TB lineage3 None
SRR29772450 MDR-TB lineage3 None
SRR1062892 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR987708 MDR-TB lineage3 None
ERR2510470 Pre-XDR-TB lineage3 pk
ERR3148179 Pre-XDR-TB lineage3 mx
ERR4798942 XDR-TB lineage3.1.2 in
SRR1162836 MDR-TB lineage3 None
ERR11082613 HR-TB lineage3 None
SRR1173380 Pre-XDR-TB lineage2.2;lineage3 None
ERR4796807 MDR-TB lineage3 in
SRR28044372 Sensitive lineage3 None
ERR4553406 MDR-TB None
ERR2510647 Pre-XDR-TB lineage3 pk
ERR2516495 MDR-TB lineage3 nl
ERR1035152 HR-TB lineage3 sa
ERR038743 RR-TB lineage3 ug
SRR22249548 Pre-XDR-TB lineage3.1 None
SRR21690825 HR-TB lineage3 None
ERR5979425 RR-TB lineage3 None
SRR18213901 HR-TB lineage3 None
SRR1049733 Pre-XDR-TB lineage3 None
ERR3276107 HR-TB lineage3 nl
SRR7585410 Other lineage3 None
ERR3470640 MDR-TB lineage3 None
SRR1174282 MDR-TB lineage3 None
SRR1173334 MDR-TB lineage3 None
SRR1140575 Pre-XDR-TB lineage2.2.1;lineage3 None
SRR28046331 Pre-XDR-TB lineage3 None
ERR13290520 MDR-TB lineage3 None
ERR5979458 MDR-TB lineage3 None
SRR1062939 Pre-XDR-TB lineage3 None
ERR15758302 Other lineage3 None
ERR2510458 MDR-TB lineage3.1.2.1 pk
ERR2510513 MDR-TB lineage3 pk
ERR2510646 RR-TB lineage3 pk
SRR29289237 MDR-TB lineage3.1.2.1 None
SRR29356750 HR-TB lineage3 None
ERR4798400 MDR-TB lineage3 in
ERR4798945 Pre-XDR-TB lineage3 in
ERR3470551 MDR-TB lineage3 None
SRR10147676 Pre-XDR-TB lineage3 None
ERR13284848 MDR-TB lineage3 None
SRR25340766 Sensitive lineage1.1.2;lineage3 None
ERR4797942 MDR-TB lineage3 in
SRR7069258 HR-TB lineage3 None
ERR4798318 Pre-XDR-TB lineage3.1.2 in
SAMN02414938 MDR-TB lineage3 se
SAMN02381042 Pre-XDR-TB lineage3 ug