lineage | Count |
---|---|
lineage3;lineage2.2.1 | 4 |
lineage3 | 84 |
lineage3;lineage2.2 | 2 |
lineage3.1.2 | 4 |
lineage3.1.2.1 | 1 |
lineage3.1.2.2 | 1 |
2 | |
lineage3.1.1 | 1 |
spoligotype | Count |
---|---|
None | 99 |
ID | Drug resistance | Lineage | Country iso2 | SRR1049607 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR987708 | MDR-TB | lineage3 | None | SRR1049733 | Pre-XDR-TB | lineage3 | None | SRR1049608 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR1049734 | Pre-XDR-TB | lineage3 | None | SRR1062892 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR1140575 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR1062932 | Pre-XDR-TB | lineage3 | None | SRR1062939 | Pre-XDR-TB | lineage3 | None | SRR1162836 | MDR-TB | lineage3 | None | SRR1140589 | Pre-XDR-TB | lineage3 | None | SRR1140625 | Pre-XDR-TB | lineage3 | None | SRR1167099 | MDR-TB | lineage3 | None | SRR1165369 | MDR-TB | lineage3 | None | SRR1166804 | MDR-TB | lineage3 | None | SRR18213901 | HR-TB | lineage3 | None | SRR1174282 | MDR-TB | lineage3 | None | SRR12882160 | MDR-TB | lineage3 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR1173334 | MDR-TB | lineage3 | None | SRR1173380 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR22424929 | MDR-TB | lineage3 | None | SRR2099977 | HR-TB | lineage3 | None | SRR22424792 | Pre-XDR-TB | lineage3.1.2 | None | SRR18593219 | Pre-XDR-TB | lineage3 | None | SRR3105753 | MDR-TB | lineage3 | None | ERR11081078 | MDR-TB | lineage3 | None | ERR11082613 | HR-TB | lineage3 | None | SRR3105747 | Pre-XDR-TB | lineage3 | None | SRR3105768 | Pre-XDR-TB | lineage3 | None | ERR4814494 | Pre-XDR-TB | lineage3 | gb | ERR2510639 | Pre-XDR-TB | lineage3 | pk | ERR3148177 | Pre-XDR-TB | lineage3 | mx | ERR3148179 | Pre-XDR-TB | lineage3 | mx | ERR3276107 | HR-TB | lineage3 | nl | ERR3275881 | HR-TB | lineage3 | nl | ERR2510513 | MDR-TB | lineage3 | pk | ERR2510611 | Pre-XDR-TB | lineage3 | pk | ERR2510441 | Pre-XDR-TB | lineage3 | pk | ERR2510647 | Pre-XDR-TB | lineage3 | pk | ERR2510646 | RR-TB | lineage3 | pk | SAMN02414938 | MDR-TB | lineage3 | se | SAMN02381049 | Pre-XDR-TB | lineage3 | ug | ERR2510458 | MDR-TB | lineage3.1.2.1 | pk | SRR5341378 | Other | lineage3 | in | ERR2510470 | Pre-XDR-TB | lineage3 | pk | ERR2513872 | Pre-XDR-TB | lineage3 | gb | ERR4820325 | MDR-TB | lineage3 | gb | ERR2513954 | Pre-XDR-TB | lineage3 | gb | SRR5341431 | Sensitive | lineage3 | in | ERR2516495 | MDR-TB | lineage3 | nl | ERR4821955 | Pre-XDR-TB | lineage3 | None | ERR270687 | HR-TB | lineage3 | None | SRR6046888 | MDR-TB | lineage3 | gb | ERR4829131 | Pre-XDR-TB | lineage3 | pk | ERR4830754 | Pre-XDR-TB | lineage3 | ir | SAMN02381042 | Pre-XDR-TB | lineage3 | ug | SRR6485060 | HR-TB | lineage3 | None | ERR038743 | RR-TB | lineage3 | ug | SRR7517713 | MDR-TB | lineage3 | None | SRR7517730 | MDR-TB | lineage3 | None | SRR7585410 | Other | lineage3 | None | ERR046730 | HR-TB | lineage3.1.2.2 | gb | ERR3470664 | MDR-TB | lineage3 | None | ERR3335781 | Pre-XDR-TB | lineage3 | pk | ERR3470640 | MDR-TB | lineage3 | None | ERR1035152 | HR-TB | lineage3 | sa | ERR3470551 | MDR-TB | lineage3 | None | ERR3470661 | MDR-TB | lineage3 | None | ERR3470662 | MDR-TB | lineage3 | None | ERR3470675 | MDR-TB | lineage3 | None | ERR3470670 | MDR-TB | lineage3 | None | ERR3470667 | MDR-TB | lineage3 | None | ERR3470677 | MDR-TB | lineage3 | None | ERR3470687 | MDR-TB | lineage3 | None | ERR3470700 | MDR-TB | lineage3 | None | ERR3470702 | MDR-TB | lineage3 | None | ERR4553403 | RR-TB | None | ERR4423629 | Pre-XDR-TB | lineage3 | None | ERR4553494 | Pre-XDR-TB | None | ERR4553406 | MDR-TB | lineage3 | None | ERR4796963 | MDR-TB | lineage3 | in | ERR4596897 | Other | lineage3.1.1 | None | ERR4796807 | MDR-TB | lineage3 | in | ERR4798318 | Pre-XDR-TB | lineage3.1.2 | in | ERR4797942 | MDR-TB | lineage3 | in | ERR4798942 | XDR-TB | lineage3.1.2 | in | ERR4798400 | MDR-TB | lineage3 | in | ERR4798945 | Pre-XDR-TB | lineage3 | in | ERR4800096 | Pre-XDR-TB | lineage3 | None | ERR4799908 | Pre-XDR-TB | lineage3 | in | ERR4799538 | Pre-XDR-TB | lineage3 | None | ERR4799871 | MDR-TB | lineage3 | in | ERR4799903 | Pre-XDR-TB | lineage3.1.2 | in | ERR6397205 | MDR-TB | lineage3 | None | ERR5979425 | RR-TB | lineage3 | None | ERR5979458 | MDR-TB | lineage3 | None | ERR6397206 | MDR-TB | lineage3 | None |
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