Rv2447c - p.Arg49Trp
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
6 HR-TB
51 MDR-TB
73 Pre-XDR-TB
10 XDR-TB
5 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 40 |
| lineage2.2.2 | 27 |
| lineage2.2.1 | 25 |
| lineage4.3.4.2 | 12 |
| lineage4.1.1.3 | 3 |
| lineage3 | 5 |
| lineage4.3.4.1 | 5 |
| lineage4.3.2.1 | 11 |
| lineage5.1.5 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.8 | 3 |
| lineage1.1.3.3 | 1 |
| lineage4.5 | 3 |
| lineage2.2.1;lineage4.3.4.2 | 1 |
| lineage1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.1.1;lineage4.3.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.2 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 145 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4813176 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR8025481 | Pre-XDR-TB | lineage2.2.2 | None | SRR25515651 | Other | lineage2.2.1 | None | SRR18715079 | Pre-XDR-TB | lineage2.2.1 | None | SRR13870394 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11082955 | MDR-TB | lineage4.3.4.2 | None | SRR10808626 | MDR-TB | lineage4.1.2.1 | None | ERR11080930 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR13243560 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013651 | Pre-XDR-TB | lineage2.2.2 | None | ERR8025646 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049047 | Pre-XDR-TB | lineage2.2.2 | None | SRR1184034 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025634 | Pre-XDR-TB | lineage2.2.2 | None | ERR13284989 | MDR-TB | lineage4.3.4.2 | None | SRR29017058 | MDR-TB | lineage3 | None | SRR29051347 | MDR-TB | lineage4.3.4.1 | None | ERR13285080 | MDR-TB | lineage4.3.4.2 | None | SRR1159083 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866436 | Pre-XDR-TB | lineage2.2.1 | None | SRR13870372 | Pre-XDR-TB | lineage4.1.2.1 | None | SAMN02360594 | MDR-TB | lineage2.2.2 | kr | SRR26399606 | Other | lineage2.2.1 | None | ERR3287862 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR3287356 | MDR-TB | lineage4.1.1.3 | pe | ERR3287820 | XDR-TB | lineage4.1.2.1 | pe | ERR3287419 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4812952 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR28393433 | MDR-TB | lineage4.1.2.1 | None | SRR28393362 | MDR-TB | lineage4.1.2.1 | None | ERR1023472 | MDR-TB | lineage4.3.2.1 | None | ERR5917980 | Pre-XDR-TB | lineage4.3.2.1 | za | ERR9992887 | XDR-TB | lineage2.2.2 | None | ERR8975746 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049045 | Pre-XDR-TB | lineage2.2.2 | None | ERR1334051 | HR-TB | lineage5.1.5 | gh | SRR11662156 | MDR-TB | lineage2.2.1 | None | SRR1049044 | Pre-XDR-TB | lineage2.2.2 | None | ERR4813124 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11081696 | MDR-TB | lineage4.3.4.2 | None | SRR1180957 | Pre-XDR-TB | lineage2.2.1 | None | SRR9224951 | MDR-TB | lineage4.3.4.1 | None | SRR29093844 | MDR-TB | lineage4.3.2.1 | None | SRR1013628 | MDR-TB | lineage2.2.2 | None | SRR11662603 | MDR-TB | lineage2.2.1 | None | ERR11068967 | MDR-TB | lineage4.3.4.2 | None | ERR4813202 | XDR-TB | lineage4.1.2.1 | None | ERR13265163 | HR-TB | lineage1.2.2.2 | None | SRR16058611 | Other | lineage4.8 | None | ERR4813133 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR28393441 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9124909 | Other | lineage4.8 | None | SRR1049024 | MDR-TB | lineage2.2.2 | None | ERR4813095 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13284318 | MDR-TB | lineage4.3.4.2 | None | ERR11069083 | MDR-TB | lineage4.3.4.2 | None | ERR13284254 | MDR-TB | lineage4.3.4.2 | None | ERR13260410 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29051509 | MDR-TB | lineage4.3.4.1 | None | ERR13284683 | MDR-TB | lineage4.3.4.2 | None | ERR13290810 | MDR-TB | lineage2.2.1 | None | SRR11662225 | MDR-TB | lineage1.1.3.3 | None | SRR10040439 | Pre-XDR-TB | lineage4.5 | None | SRR28859770 | Other | lineage4.5 | None | SRR29539032 | MDR-TB | lineage2.2.1 | None | SRR24256086 | MDR-TB | lineage4.8 | None | ERR5866437 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081815 | MDR-TB | lineage4.3.4.2 | None | ERR4796424 | XDR-TB | lineage2.2.1 | in | ERR13285091 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4797358 | Pre-XDR-TB | lineage3 | in | ERR4797192 | Pre-XDR-TB | lineage2.2.1;lineage4.3.4.2 | in | ERR3287871 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR9119795 | MDR-TB | lineage4.3.2.1 | None | ERR10112891 | MDR-TB | lineage4.3.2.1 | None | SAMN02360603 | Pre-XDR-TB | lineage2.2.2 | kr | SRR28467061 | MDR-TB | lineage2.2.1 | None | SRR28393788 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9120036 | MDR-TB | lineage4.3.2.1 | None | ERR4813104 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR2600564 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813126 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813200 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR27069375 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516431 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR2516568 | HR-TB | lineage4.1.2.1 | pe | ERR2516738 | XDR-TB | lineage4.1.2.1 | pe | SRR5709792 | Pre-XDR-TB | lineage1.1 | th | ERR5987324 | MDR-TB | lineage4.3.2.1 | None | SRR10808353 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13289347 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1159150 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260865 | XDR-TB | lineage2.2.2 | None | SRR10040188 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993019 | XDR-TB | lineage2.2.2 | None | ERR4813096 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13291080 | Pre-XDR-TB | lineage4.5 | None | ERR4813177 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9224965 | MDR-TB | lineage4.3.4.1 | None | ERR12117972 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1049025 | MDR-TB | lineage2.2.2 | None | SRR1049046 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013649 | Pre-XDR-TB | lineage2.2.2 | None | ERR5987234 | MDR-TB | lineage4.3.2.1 | None | SRR5153860 | Pre-XDR-TB | lineage4.2.1 | None | SRR28045456 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | ERR10680133 | MDR-TB | lineage4.1.2.1 | None | ERR13258450 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284362 | MDR-TB | lineage4.3.4.2 | None | ERR1215464 | HR-TB | lineage5.1.5 | None | ERR4553540 | HR-TB | lineage3 | None | SRR6458447 | Pre-XDR-TB | lineage2.2.1 | None | SRR13870385 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2510389 | Pre-XDR-TB | lineage3 | pk | ERR10112875 | MDR-TB | lineage2.2.1.1;lineage4.3.2.1 | None | ERR2184286 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4796503 | XDR-TB | lineage3 | in | ERR4813117 | XDR-TB | lineage4.1.2.1 | None | SRR29051016 | MDR-TB | lineage4.3.4.1 | None | SRR1013627 | MDR-TB | lineage2.2.2 | None | ERR8025438 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360604 | Pre-XDR-TB | lineage2.2.2 | kr | ERR2184393 | MDR-TB | lineage4.1.2.1 | pe | ERR3287375 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR28394228 | MDR-TB | lineage4.1.2.1 | None | ERR4813205 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4812869 | MDR-TB | lineage4.1.2.1 | None | ERR4830970 | Pre-XDR-TB | lineage4.2.2.2 | np | ERR4818045 | HR-TB | lineage1.1.2 | gb | SRR5709789 | MDR-TB | lineage1.1.1 | th | SRR5709768 | MDR-TB | lineage2.2.1 | th | SRR1013648 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02419541 | Pre-XDR-TB | lineage2.2.1 | by | ERR5987230 | Pre-XDR-TB | lineage2.2.2 | None | ERR10748309 | MDR-TB | lineage4.3.2.1 | None | ERR4798473 | XDR-TB | lineage2.2.1 | in | ERR13289320 | Pre-XDR-TB | lineage2.2.2 | None | ERR9120035 | MDR-TB | lineage4.3.2.1 | None | ERR4813132 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR13870413 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR8025637 | Pre-XDR-TB | lineage2.2.2 | None | DRR130070 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013650 | Pre-XDR-TB | lineage2.2.2 | None | ERR11043532 | MDR-TB | lineage4.3.4.2 | None |
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