Rv2447c - p.Glu40Lys
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
2 Sensitive
2 RR-TB
3 HR-TB
26 MDR-TB
61 Pre-XDR-TB
5 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2 | 11 |
| lineage2.2.1 | 39 |
| lineage3;lineage4.8 | 1 |
| lineage4.1.2.1 | 11 |
| lineage5.3 | 1 |
| lineage1.1.2 | 4 |
| lineage4.1.3 | 2 |
| lineage2.2.1;lineage3.1.2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage3.1.2 | 4 |
| lineage2.2.2 | 5 |
| lineage4.1.2 | 2 |
| lineage3 | 7 |
| lineage2.1 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.8 | 3 |
| lineage4.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 99 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2516687 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR2516554 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR2516682 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR2510195 | MDR-TB | lineage4.3.4.2 | pe | DRR130179 | Pre-XDR-TB | lineage2.2.1 | None | SRR6356961 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827582 | XDR-TB | lineage3;lineage4.8 | None | ERR6397172 | MDR-TB | lineage4.1.2.1 | None | ERR3148046 | MDR-TB | lineage5.3 | None | ERR3148042 | MDR-TB | lineage4.1.2.1 | None | SRR15014737 | Pre-XDR-TB | lineage1.1.2 | None | ERR4423489 | Pre-XDR-TB | lineage4.1.3 | None | ERR13275911 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827747 | XDR-TB | lineage2.2.1;lineage3.1.2 | None | ERR6358869 | MDR-TB | lineage4.6.1.1 | None | SRR29772671 | MDR-TB | lineage1.1.2 | None | SRR7653603 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261479 | Pre-XDR-TB | lineage3.1.2 | None | ERR13266113 | Pre-XDR-TB | lineage3.1.2 | None | ERR13260967 | Pre-XDR-TB | lineage2.2.1 | None | ERR6865428 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096297 | Pre-XDR-TB | lineage2.2.2 | None | SRR29055894 | MDR-TB | lineage1.1.2 | None | ERR5758329 | Pre-XDR-TB | lineage2.2.2 | None | SRR14782671 | Sensitive | lineage4.1.2 | None | SRR28393997 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR13262044 | MDR-TB | lineage3 | None | SRR11662669 | MDR-TB | lineage2.1 | None | ERR13267033 | Pre-XDR-TB | lineage2.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR25827790 | XDR-TB | lineage2.2.1;lineage3 | None | SRR6458447 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316068 | HR-TB | lineage2.2.1 | None | ERR13276355 | MDR-TB | lineage4.1.2.1 | None | SRR22873596 | Pre-XDR-TB | lineage2.2.2 | None | ERR2510476 | RR-TB | lineage3 | pk | ERR8025577 | Pre-XDR-TB | lineage2.2.2 | None | ERR4796389 | Pre-XDR-TB | lineage2.2.1 | in | ERR4827826 | Sensitive | lineage2.2.1 | None | ERR4797394 | Pre-XDR-TB | lineage4.8 | in | ERR4799700 | Pre-XDR-TB | lineage3 | in | ERR11043570 | Pre-XDR-TB | lineage2.2.1 | None | ERR13262158 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800048 | XDR-TB | lineage4.1.2.1 | in | ERR4800077 | Pre-XDR-TB | lineage2.2.1 | in | SRR21798459 | HR-TB | lineage4.1.2 | None | ERR4800594 | Pre-XDR-TB | lineage3.1.2 | in | ERR3287312 | Pre-XDR-TB | lineage4.3.4.2 | pe | SRR28351186 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827514 | Pre-XDR-TB | lineage3 | None | SRR28351580 | Pre-XDR-TB | lineage3 | None | ERR775340 | MDR-TB | lineage4.3.4.2 | pe | ERR403296 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393330 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1952142 | MDR-TB | lineage1.1.2 | ie | SRR6824351 | RR-TB | lineage2.2.1 | cn | ERR4024907 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274025 | Pre-XDR-TB | lineage4.2.1 | None | ERR4798355 | MDR-TB | lineage2.2.1 | in | ERR4798368 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798760 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799472 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800060 | XDR-TB | lineage4.1.2.1 | in | ERR4813291 | MDR-TB | lineage4.3.4.2 | pe | SRR11972357 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR6358868 | MDR-TB | lineage4.6.1.1 | None | ERR8774231 | Pre-XDR-TB | lineage4.1.3 | None | ERR13284060 | Pre-XDR-TB | lineage2.2.1 | None | SRR29358144 | MDR-TB | lineage4.1.2.1 | None | ERR13266731 | Pre-XDR-TB | lineage3.1.2 | None | SRR8357447 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291025 | MDR-TB | lineage2.2.2 | None | ERR6397176 | MDR-TB | lineage4.1.2.1 | None | SRR28393251 | MDR-TB | lineage4.3.4.2 | None | SRR25827460 | Pre-XDR-TB | lineage4.8 | None | SRR25827499 | Pre-XDR-TB | lineage3 | None | SRR5073923 | HR-TB | lineage2.2.1 | None | SRR29358140 | MDR-TB | lineage4.1.2.1 | None | ERR13266671 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420636 | MDR-TB | lineage4.5 | None | ERR11082649 | MDR-TB | lineage4.1.2.1 | None | ERR4797510 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796974 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797438 | Pre-XDR-TB | lineage2.2.1 | in | ERR13285093 | MDR-TB | lineage4.1.2.1 | None | ERR4800328 | MDR-TB | lineage4.8 | in | ERR4799148 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798460 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798666 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796973 | Pre-XDR-TB | lineage2.2.1 | in | SRR671787 | Pre-XDR-TB | lineage2.2.1 | cn | SRR25827791 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044355 | MDR-TB | lineage3 | None | ERR751593 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR751354 | MDR-TB | lineage4.3.3 | pe | ERR8665984 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044618 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665596 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256286 | Pre-XDR-TB | lineage2.2.1 | None |
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