lineage | Count |
---|---|
lineage2.2.1 | 45 |
lineage4.3.3 | 4 |
lineage4.4.2 | 3 |
lineage3 | 12 |
lineage4.3.2 | 2 |
lineage4.2.1 | 2 |
lineage4.3.4.2 | 2 |
lineage4.5 | 11 |
lineage2.2.2 | 19 |
lineage2.2.2;lineage4 | 1 |
lineage4.8 | 2 |
lineage4.1.2.1 | 2 |
lineage1.1.1 | 2 |
lineage3.1.2.1 | 3 |
lineage2.2.1.1 | 1 |
lineage4.1.2.1.1 | 1 |
lineage3.1.2 | 1 |
lineage2.2.1;lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 114 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR13290592 | MDR-TB | lineage2.2.1 | None |
ERR2707143 | MDR-TB | lineage4.3.3 | cd |
ERR2707069 | MDR-TB | lineage4.3.3 | cd |
ERR4811359 | MDR-TB | lineage4.4.2 | cn |
ERR502928 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4796804 | Pre-XDR-TB | lineage2.2.1 | in |
SRR13232571 | Pre-XDR-TB | lineage2.2.1 | None |
SRR2100838 | MDR-TB | lineage3 | None |
ERR2516732 | MDR-TB | lineage4.3.2 | pe |
SRR13232564 | Pre-XDR-TB | lineage2.2.1 | None |
SRR18714952 | MDR-TB | lineage4.2.1 | None |
ERR4797988 | Pre-XDR-TB | lineage2.2.1 | in |
SRR1368333 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13262168 | XDR-TB | lineage2.2.1 | None |
ERR1034590 | Pre-XDR-TB | lineage3 | pk |
SRR11662523 | MDR-TB | lineage2.2.1 | None |
ERR4800609 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11044003 | Pre-XDR-TB | lineage2.2.1 | None |
ERR387059 | HR-TB | lineage3 | None |
SRR1162811 | MDR-TB | lineage2.2.1 | None |
ERR1034859 | Pre-XDR-TB | lineage4.3.4.2 | pt |
SRR1011521 | Pre-XDR-TB | lineage4.5 | None |
SRR1165604 | MDR-TB | lineage2.2.1 | None |
ERR4798731 | Pre-XDR-TB | lineage2.2.1 | in |
ERR4797961 | Pre-XDR-TB | lineage2.2.1 | in |
SAMN02360626 | Pre-XDR-TB | lineage2.2.2 | kr |
ERR13290591 | MDR-TB | lineage2.2.1 | None |
SRR1165502 | MDR-TB | lineage2.2.1 | None |
SRR5153860 | Pre-XDR-TB | lineage4.2.1 | None |
SRR3742670 | Pre-XDR-TB | lineage2.2.1 | None |
SRR25206930 | MDR-TB | lineage2.2.1 | None |
SRR1019192 | Pre-XDR-TB | lineage4.5 | None |
ERR2514935 | HR-TB | lineage3 | gb |
SRR30180260 | MDR-TB | lineage4.5 | None |
SRR1013546 | Pre-XDR-TB | lineage2.2.2 | None |
ERR13290946 | MDR-TB | lineage4.5 | None |
SRR1011522 | Pre-XDR-TB | lineage4.5 | None |
ERR13290988 | Pre-XDR-TB | lineage4.5 | None |
SAMN02360566 | Pre-XDR-TB | lineage2.2.2 | kr |
SRR1048861 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1003105 | RR-TB | lineage2.2.2;lineage4 | None |
SRR26056448 | HR-TB | lineage2.2.1 | None |
SRR20632788 | MDR-TB | lineage2.2.1 | None |
ERR11082702 | MDR-TB | lineage4.8 | None |
ERR2516568 | HR-TB | lineage4.1.2.1 | pe |
ERR270730 | MDR-TB | lineage3 | None |
ERR7902747 | HR-TB | lineage1.1.1 | None |
SAMN02599147 | HR-TB | lineage3.1.2.1 | in |
SAMN02360552 | Pre-XDR-TB | lineage2.2.2 | kr |
SRR1013561 | Pre-XDR-TB | lineage2.2.2 | None |
ERR10465992 | HR-TB | lineage1.1.1 | None |
ERR2510439 | MDR-TB | lineage3 | pk |
ERR2510594 | Pre-XDR-TB | lineage3 | pk |
SRR1048845 | Pre-XDR-TB | lineage2.2.2 | None |
SRR25207327 | MDR-TB | lineage4.4.2 | None |
ERR1035099 | Pre-XDR-TB | lineage2.2.1.1 | vn |
ERR760600 | MDR-TB | lineage4.1.2.1.1 | ar |
SRR1048880 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1048879 | Pre-XDR-TB | lineage2.2.2 | None |
SRR28119825 | MDR-TB | lineage2.2.1 | None |
SRR28394030 | MDR-TB | lineage4.3.2 | None |
SRR1013562 | Pre-XDR-TB | lineage2.2.2 | None |
SRR7898219 | Pre-XDR-TB | lineage3.1.2 | in |
SRR1166869 | MDR-TB | lineage2.2.1 | None |
SRR29093110 | MDR-TB | lineage2.2.1 | None |
SRR1048862 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1003106 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1013545 | Pre-XDR-TB | lineage2.2.2 | None |
ERR4799162 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4799066 | Pre-XDR-TB | lineage2.2.1 | in |
SAMN02414967 | MDR-TB | lineage2.2.1 | se |
SRR23862181 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1172978 | HR-TB | lineage3.1.2.1 | None |
ERR688022 | Pre-XDR-TB | lineage3 | None |
ERR4796360 | XDR-TB | lineage2.2.1 | in |
ERR8665555 | Pre-XDR-TB | lineage2.2.1 | None |
SRR13232499 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665554 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1003104 | Pre-XDR-TB | lineage2.2.2 | None |
SRR22251450 | HR-TB | lineage2.2.1 | None |
SRR29231712 | MDR-TB | lineage4.3.3 | None |
ERR1034870 | Pre-XDR-TB | lineage4.3.4.2 | pt |
SRR1172856 | HR-TB | lineage3.1.2.1 | None |
ERR13290593 | MDR-TB | lineage2.2.1 | None |
ERR13284913 | MDR-TB | lineage4.8 | None |
SRR29440931 | MDR-TB | lineage3 | None |
ERR13291074 | Pre-XDR-TB | lineage4.5 | None |
ERR4797926 | Pre-XDR-TB | lineage4.1.2.1 | in |
ERR13266907 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13290590 | MDR-TB | lineage2.2.1 | None |
ERR13290830 | Pre-XDR-TB | lineage4.5 | None |
ERR13290848 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None |
SRR833219 | Pre-XDR-TB | lineage4.5 | None |
ERR13276179 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10040372 | Pre-XDR-TB | lineage4.4.2 | None |
ERR13291058 | Pre-XDR-TB | lineage4.5 | None |
SRR29231005 | MDR-TB | lineage4.3.3 | None |
ERR8665842 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4798886 | Pre-XDR-TB | lineage2.2.1 | in |
SRR29772561 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4811316 | MDR-TB | lineage2.2.1 | cn |
SAMN02360620 | Pre-XDR-TB | lineage2.2.2 | kr |
SRR1048844 | Pre-XDR-TB | lineage2.2.2 | None |
ERR13291087 | Pre-XDR-TB | lineage4.5 | None |
ERR2517093 | MDR-TB | lineage3 | gb |
ERR8665596 | Pre-XDR-TB | lineage2.2.1 | None |
SRR25207185 | MDR-TB | lineage2.2.1 | None |
SRR25827329 | XDR-TB | lineage2.2.1 | None |
ERR2510560 | Pre-XDR-TB | lineage3 | pk |
ERR2510551 | XDR-TB | lineage3 | pk |
SRR1013574 | Pre-XDR-TB | lineage2.2.2 | None |
SRR13180339 | Pre-XDR-TB | lineage2.2.1 | None |
SAMN02360560 | Pre-XDR-TB | lineage2.2.2 | kr |
SRR1013573 | Pre-XDR-TB | lineage2.2.2 | None |