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SRA data
Rv2477c
- c.-400G>A
Drug resistance types
71 Sensitive
4 RR-TB
4 HR-TB
23 MDR-TB
34 Pre-XDR-TB
3 XDR-TB
8 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1.1
136
lineage2.2.1.1;lineage4.6.1
4
lineage2.2.1.1;lineage3
3
lineage2.2.1.1;lineage3;lineage4.1.1.1
1
lineage2.2.1.1;lineage2.2.1.2;lineage3
1
lineage2.2.1.1;lineage3.1.2
1
lineage1.1.3.1;lineage2.2.1.1
1
Showing 1 to 7 of 7 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
147
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR10225494
Pre-XDR-TB
lineage2.2.1.1
None
ERR11067540
Sensitive
lineage2.2.1.1
None
ERR1213887
Pre-XDR-TB
lineage2.2.1.1
np
ERR13261089
Sensitive
lineage2.2.1.1
None
ERR13265264
Sensitive
lineage2.2.1.1
None
ERR13266592
Sensitive
lineage2.2.1.1
None
ERR13266784
MDR-TB
lineage2.2.1.1
None
ERR13266808
Pre-XDR-TB
lineage2.2.1.1
None
ERR13285355
Sensitive
lineage2.2.1.1
None
ERR13290875
Pre-XDR-TB
lineage2.2.1.1
None
Showing 1 to 10 of 147 entries
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