Rv2477c - c.-400G>A


Drug resistance types
48 Sensitive 4 RR-TB 4 HR-TB 22 MDR-TB 31 Pre-XDR-TB 3 XDR-TB 8 Other
lineage Counts
lineage Count
lineage2.2.1.1 109
lineage2.2.1.1;lineage3.1.2 1
lineage2.2.1.1;lineage4.6.1 4
lineage2.2.1.1;lineage3 3
lineage2.2.1.1;lineage2.2.1.2;lineage3 1
lineage2.2.1.1;lineage3;lineage4.1.1.1 1
lineage1.1.3.1;lineage2.2.1.1 1
spoligotype Counts
spoligotype Count
None 120
Geographic prevalence
Country level data for this variant is available for 37 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR21689840 Sensitive lineage2.2.1.1 None
ERR4814411 Sensitive lineage2.2.1.1 gb
SRR8217900 Other lineage2.2.1.1 None
SRR6650402 Sensitive lineage2.2.1.1 None
SRR6650257 Sensitive lineage2.2.1.1 None
SRR18911594 Sensitive lineage2.2.1.1 None
SRR25827528 MDR-TB lineage2.2.1.1 None
SRR26112384 Sensitive lineage2.2.1.1 None
SRR25827465 Sensitive lineage2.2.1.1;lineage3.1.2 None
SRR5817465 Pre-XDR-TB lineage2.2.1.1 None
ERR4799231 HR-TB lineage2.2.1.1 in
ERR4799352 Pre-XDR-TB lineage2.2.1.1 in
SRR1173415 MDR-TB lineage2.2.1.1;lineage4.6.1 None
ERR4798428 MDR-TB lineage2.2.1.1 in
ERR4423534 MDR-TB lineage2.2.1.1 None
SRR6797796 Sensitive lineage2.2.1.1 None
SRR26399407 Sensitive lineage2.2.1.1 None
SRR21676414 Sensitive lineage2.2.1.1 None
ERR4799236 Sensitive lineage2.2.1.1 in
ERR4798331 Sensitive lineage2.2.1.1 in
SRR21728168 Sensitive lineage2.2.1.1 None
ERR4423650 MDR-TB lineage2.2.1.1 None
SRR25827869 Pre-XDR-TB lineage2.2.1.1 None
ERR4798295 Pre-XDR-TB lineage2.2.1.1 in
SRR6152782 Sensitive lineage2.2.1.1 ca
SRR6797434 Sensitive lineage2.2.1.1 None
SRR25340920 Sensitive lineage2.2.1.1 None
SRR7069622 Sensitive lineage2.2.1.1 None
ERR3077945 MDR-TB lineage2.2.1.1 None
ERR4799516 MDR-TB lineage2.2.1.1 in
SRR28045760 Sensitive lineage2.2.1.1 None
SRR25827645 Pre-XDR-TB lineage2.2.1.1 None
SRR18593231 MDR-TB lineage2.2.1.1;lineage3 None
ERR3132127 Pre-XDR-TB lineage2.2.1.1 None
SRR6797370 Sensitive lineage2.2.1.1 None
ERR4796449 Pre-XDR-TB lineage2.2.1.1 in
ERR4799999 MDR-TB lineage2.2.1.1 in
ERR10225494 Pre-XDR-TB lineage2.2.1.1 None
ERR4798513 Sensitive lineage2.2.1.1 in
SRR22175261 Pre-XDR-TB lineage2.2.1.1 None
SRR17856656 HR-TB lineage2.2.1.1 None
SRR2101233 Other lineage2.2.1.1 None
ERR4796398 Pre-XDR-TB lineage2.2.1.1 in
SRR25340745 Sensitive lineage2.2.1.1 None
SRR21675928 Sensitive lineage2.2.1.1 None
SRR22424757 Pre-XDR-TB lineage2.2.1.1 None
ERR4797116 Sensitive lineage2.2.1.1 in
SRR6797351 Sensitive lineage2.2.1.1 None
SRR18914234 Sensitive lineage2.2.1.1 None
SRR25827356 Pre-XDR-TB lineage2.2.1.1;lineage2.2.1.2;lineage3 None
SRR6152857 Sensitive lineage2.2.1.1 ca
SRR25827812 Pre-XDR-TB lineage2.2.1.1;lineage3 None
SRR25827435 XDR-TB lineage2.2.1.1 None
SRR20969519 HR-TB lineage2.2.1.1 None
SRR5535861 MDR-TB lineage2.2.1.1 None
ERR4423651 RR-TB lineage2.2.1.1 None
SRR1200798 Sensitive lineage2.2.1.1 None
ERR4423774 MDR-TB lineage2.2.1.1 None
ERR405221 MDR-TB lineage2.2.1.1 None
SRR1173245 MDR-TB lineage2.2.1.1;lineage4.6.1 None
ERR4800238 HR-TB lineage2.2.1.1 in
SRR21685248 Sensitive lineage2.2.1.1 None
SRR28044953 Pre-XDR-TB lineage2.2.1.1 None
SRR28046072 Pre-XDR-TB lineage2.2.1.1 None
SRR28044786 Sensitive lineage2.2.1.1 None
ERR2510870 Pre-XDR-TB lineage2.2.1.1 pk
ERR2510871 Pre-XDR-TB lineage2.2.1.1 pk
ERR4800352 MDR-TB lineage2.2.1.1 in
SRR25827652 Pre-XDR-TB lineage2.2.1.1;lineage3;lineage4.1.1.1 None
SRR6797299 Sensitive lineage1.1.3.1;lineage2.2.1.1 None
ERR4799334 Sensitive lineage2.2.1.1 None
SRR6650247 Sensitive lineage2.2.1.1 None
ERR386827 Other lineage2.2.1.1 None
SRR5535924 MDR-TB lineage2.2.1.1 None
ERR4800245 MDR-TB lineage2.2.1.1 None
SRR26112366 Sensitive lineage2.2.1.1 None
SRR5341212 Sensitive lineage2.2.1.1 None
ERR4423659 MDR-TB lineage2.2.1.1 None
ERR4423773 MDR-TB lineage2.2.1.1 None
SRR22249541 Sensitive lineage2.2.1.1 None
SRR21710594 Sensitive lineage2.2.1.1 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR6152908 Sensitive lineage2.2.1.1 ca
SRR5067334 Sensitive lineage2.2.1.1 vn
ERR4799425 Sensitive lineage2.2.1.1 in
SRR18213697 Other lineage2.2.1.1 None
SRR6797755 Sensitive lineage2.2.1.1 None
ERR4799743 Pre-XDR-TB lineage2.2.1.1 in
ERR4800081 Pre-XDR-TB lineage2.2.1.1 in
ERR4797650 Sensitive lineage2.2.1.1 in
SRR25827423 Pre-XDR-TB lineage2.2.1.1 None
ERR4799862 Pre-XDR-TB lineage2.2.1.1 in
ERR351895 Other lineage2.2.1.1 None
ERR4797477 Sensitive lineage2.2.1.1 in
SRR6650180 Other lineage2.2.1.1 None
ERR1213887 Pre-XDR-TB lineage2.2.1.1 np
ERR4423653 MDR-TB lineage2.2.1.1 None
SRR1173866 MDR-TB lineage2.2.1.1;lineage4.6.1 None
ERR2513936 Sensitive lineage2.2.1.1 gb
SRR1173873 MDR-TB lineage2.2.1.1;lineage4.6.1 None
SRR15014750 Pre-XDR-TB lineage2.2.1.1 None
SRR25827674 XDR-TB lineage2.2.1.1;lineage3 None
ERR4423658 RR-TB lineage2.2.1.1 None
ERR4797130 RR-TB lineage2.2.1.1 in
ERR4816923 Sensitive lineage2.2.1.1 None
SRR28044467 Pre-XDR-TB lineage2.2.1.1 None
SRR28045809 XDR-TB lineage2.2.1.1 None
SRR28045563 Pre-XDR-TB lineage2.2.1.1 None
SRR28045731 Sensitive lineage2.2.1.1 None
ERR2510252 Pre-XDR-TB lineage2.2.1.1 pk
ERR2510305 MDR-TB lineage2.2.1.1 pk
ERR4831012 Pre-XDR-TB lineage2.2.1.1 np
SRR18910995 Sensitive lineage2.2.1.1 None
ERR11067540 Sensitive lineage2.2.1.1 None
ERR4799502 Pre-XDR-TB lineage2.2.1.1 in
ERR4798155 Pre-XDR-TB lineage2.2.1.1 in
SRR16115014 Sensitive lineage2.2.1.1 None
ERR4799658 Pre-XDR-TB lineage2.2.1.1 in
SRR27450128 Other lineage2.2.1.1 None
SRR5065231 Other lineage2.2.1.1 vn