Rv2752c - c.480C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
71 Sensitive
1 RR-TB
0 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 70 |
| lineage3 | 4 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage1.2.2.2 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 83 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25524712 | Sensitive | lineage4.9 | None | SRR070025 | MDR-TB | lineage3 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR25524722 | Sensitive | lineage4.9 | None | SRR25524705 | Sensitive | lineage4.9 | None | SRR25101016 | Sensitive | lineage4.9 | None | SRR14160046 | Sensitive | lineage4.9 | None | SRR25524727 | Sensitive | lineage4.9 | None | SRR25524716 | Sensitive | lineage4.9 | None | SRR2101141 | Sensitive | lineage4.9 | None | SRR25524694 | Sensitive | lineage4.9 | None | SRR25524726 | Sensitive | lineage4.9 | None | SRR25100996 | Sensitive | lineage4.9 | None | SRR25524725 | Sensitive | lineage4.9 | None | SRR25101027 | Sensitive | lineage4.9 | None | SRR17567956 | Sensitive | lineage4.9 | None | SRR25101060 | Sensitive | lineage4.9 | None | SRR25524715 | Sensitive | lineage4.9 | None | SRR25524692 | Sensitive | lineage4.9 | None | SRR25524704 | Sensitive | lineage4.9 | None | SRR25524711 | Sensitive | lineage4.9 | None | SRR25524697 | Sensitive | lineage4.9 | None | SRR25524714 | Sensitive | lineage4.9 | None | SRR25101005 | Sensitive | lineage4.9 | None | SRR17567912 | Sensitive | lineage4.9 | None | SRR25524717 | Sensitive | lineage4.9 | None | SRR25101070 | Sensitive | lineage4.9 | None | SRR25524718 | Sensitive | lineage4.9 | None | SRR25524708 | Sensitive | lineage4.9 | None | ERR4820372 | Sensitive | lineage4.9 | gb | SRR17567955 | Sensitive | lineage4.9 | None | SRR25101072 | Sensitive | lineage4.9 | None | SRR25524723 | Sensitive | lineage4.9 | None | SRR25524710 | Sensitive | lineage4.9 | None | SRR25524696 | Sensitive | lineage4.9 | None | SRR25101068 | Sensitive | lineage4.9 | None | SRR25524713 | Sensitive | lineage4.9 | None | SRR25524707 | Sensitive | lineage4.9 | None | SRR17567954 | Sensitive | lineage4.9 | None | SRR25101038 | Sensitive | lineage4.9 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR28045395 | Sensitive | lineage1.2.2.2 | None | SRR17567883 | Sensitive | lineage4.9 | None | SRR067483 | MDR-TB | lineage3 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR17567884 | Sensitive | lineage4.9 | None | SRR25101069 | Sensitive | lineage4.9 | None | SRR17567890 | Sensitive | lineage4.9 | None | SRR25524720 | Sensitive | lineage4.9 | None | SRR25524702 | Sensitive | lineage4.9 | None | SRR25524709 | Sensitive | lineage4.9 | None | SRR17567953 | Sensitive | lineage4.9 | None | SRR25101049 | Sensitive | lineage4.9 | None | SRR17567957 | Sensitive | lineage4.9 | None | SRR25524693 | Sensitive | lineage4.9 | None | SRR17567923 | Sensitive | lineage4.9 | None | SRR17567901 | Sensitive | lineage4.9 | None | ERR330703 | Sensitive | lineage4.9 | None | SRR25524698 | Sensitive | lineage4.9 | None | SRR25524724 | Sensitive | lineage4.9 | None | SRR17567934 | Sensitive | lineage4.9 | None | SRR17567945 | Sensitive | lineage4.9 | None | SRR25100995 | Sensitive | lineage4.9 | None | SRR25524719 | Sensitive | lineage4.9 | None | SRR14160047 | Sensitive | lineage4.9 | None | SRR25524703 | Sensitive | lineage4.9 | None | SRR25524695 | Sensitive | lineage4.9 | None | SRR25524721 | Sensitive | lineage4.9 | None | SRR25524706 | Sensitive | lineage4.9 | None | SRR14160054 | Sensitive | lineage4.9 | None | SRR25524701 | Sensitive | lineage4.9 | None | SRR14160065 | Sensitive | lineage4.9 | None | SRR25101071 | Sensitive | lineage4.9 | None | SRR14160066 | Sensitive | lineage4.9 | None | ERR2516655 | MDR-TB | lineage3 | nl | SRR070031 | MDR-TB | lineage3 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR25524699 | Sensitive | lineage4.9 | None | SRR25524700 | Sensitive | lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
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