lineage | Count |
---|---|
lineage2.2.1 | 177 |
lineage4.7 | 4 |
lineage4.2.2.2 | 1 |
lineage4.3.3 | 13 |
lineage4.4.1.1 | 13 |
lineage4.8 | 13 |
lineage4.3 | 1 |
lineage4.1.2.1 | 10 |
lineage4.1.2 | 1 |
lineage4.3.2 | 2 |
lineage2.2.1.2 | 1 |
lineage2.2.2 | 2 |
lineage4.6.4 | 8 |
lineage4.1.4 | 2 |
lineage2.2.1;lineage4.1.2.1 | 1 |
lineage4.8.2 | 2 |
lineage2.2.1.1 | 4 |
lineage4.3.4.2 | 3 |
lineage4.9 | 2 |
lineage4.1.1;lineage4.3.3 | 1 |
lineage4.6.3 | 1 |
lineage2.2.1;lineage4.8 | 2 |
lineage4.5 | 3 |
lineage3.1.1 | 1 |
lineage4.3.4.1 | 3 |
lineage3.1.2 | 2 |
lineage3 | 4 |
lineage4.2.1.1 | 1 |
lineage4.6.2.2 | 1 |
lineage4.6.1.1 | 1 |
lineage2.2.1;lineage4.4.1.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.2.2 | 1 |
spoligotype | Count |
---|---|
None | 283 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR5866362 | MDR-TB | lineage2.2.1 | None |
SRR7592358 | MDR-TB | lineage4.7 | None |
SRR27332272 | Sensitive | lineage4.2.2.2 | None |
ERR1193865 | MDR-TB | lineage4.3.3 | uz |
ERR8665673 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665727 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665968 | Pre-XDR-TB | lineage2.2.1 | None |
DRR473799 | Other | lineage2.2.1 | None |
ERR11774977 | Sensitive | lineage4.4.1.1 | None |
ERR552080 | MDR-TB | lineage4.3.3 | None |
SRR28351475 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4820776 | Pre-XDR-TB | lineage4.8 | gb |
ERR13292094 | HR-TB | lineage2.2.1 | None |
DRR130091 | Pre-XDR-TB | lineage2.2.1 | None |
SRR22251650 | Sensitive | lineage4.3 | None |
SRR16057879 | Sensitive | lineage2.2.1 | None |
ERR8665771 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1180937 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11067650 | MDR-TB | lineage4.1.2.1 | None |
SRR13232658 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13291551 | Sensitive | lineage2.2.1 | None |
ERR8665718 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4817296 | Sensitive | lineage4.1.2.1 | gb |
ERR8665927 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2446503 | Sensitive | lineage2.2.1 | nl |
ERR552080_ERR552079 | MDR-TB | lineage4.3.3 | None |
ERR9286011 | MDR-TB | lineage2.2.1 | None |
ERR2516356 | MDR-TB | lineage2.2.1 | be |
ERR3148147 | RR-TB | lineage4.1.2 | None |
SRR7069279 | MDR-TB | lineage2.2.1 | None |
ERR11465077 | Sensitive | lineage4.4.1.1 | None |
SRR21686096 | Sensitive | lineage2.2.1 | None |
SRR13232632 | MDR-TB | lineage2.2.1 | None |
SRR7516420 | Sensitive | lineage4.8 | None |
ERR2027249 | Sensitive | lineage4.1.2.1 | None |
SRR6458448 | Pre-XDR-TB | lineage2.2.1 | None |
ERR279580 | Sensitive | lineage4.4.1.1 | None |
SRR10430363 | MDR-TB | lineage2.2.1 | None |
ERR776663 | MDR-TB | lineage4.3.2 | None |
ERR8665678 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665730 | MDR-TB | lineage2.2.1 | None |
ERR8665851 | Pre-XDR-TB | lineage2.2.1 | None |
SRR25827328 | Pre-XDR-TB | lineage2.2.1.2 | None |
SRR14801753 | HR-TB | lineage4.3.3 | None |
ERR8665588 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4972584 | MDR-TB | lineage4.3.2 | None |
ERR8665826 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665926 | Pre-XDR-TB | lineage2.2.1 | None |
SRR20632823 | Pre-XDR-TB | lineage2.2.2 | None |
ERR8665942 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4829668 | Sensitive | lineage4.8 | it |
SRR16156198 | RR-TB | lineage4.4.1.1 | None |
SRR6046767 | RR-TB | lineage2.2.1 | None |
SRR28239721 | MDR-TB | lineage2.2.1 | None |
ERR13260562 | MDR-TB | lineage4.3.3 | None |
ERR8665779 | MDR-TB | lineage2.2.1 | None |
ERR2517145 | Sensitive | lineage2.2.1 | nl |
ERR4830963 | Pre-XDR-TB | lineage2.2.1 | np |
SRR18715256 | MDR-TB | lineage2.2.1 | None |
ERR4797535 | Pre-XDR-TB | lineage2.2.1 | in |
ERR8665935 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665589 | Other | lineage2.2.1 | None |
SRR1765872 | Other | lineage2.2.1 | None |
ERR9119585 | MDR-TB | lineage4.6.4 | None |
ERR8665531 | Pre-XDR-TB | lineage2.2.1 | None |
ERR9125754 | Sensitive | lineage2.2.1 | None |
SRR10303286 | MDR-TB | lineage2.2.1 | None |
ERR9119527 | MDR-TB | lineage4.1.4 | None |
ERR8665513 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4800209 | HR-TB | lineage2.2.1 | in |
SRR1723857 | MDR-TB | lineage2.2.1 | cn |
SRR15368823 | Sensitive | lineage2.2.1 | None |
SRR29017498 | Sensitive | lineage2.2.1 | None |
ERR13265894 | Sensitive | lineage2.2.1 | None |
SRR25827377 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4830961 | Pre-XDR-TB | lineage2.2.1 | np |
SRR14801873 | Sensitive | lineage4.8 | None |
SRR29441074 | Other | lineage2.2.1 | None |
SRR6458456 | MDR-TB | lineage2.2.1 | None |
ERR4872207 | MDR-TB | lineage4.6.4 | None |
SRR29081648 | HR-TB | lineage4.3.3 | None |
ERR8665934 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665618 | Pre-XDR-TB | lineage2.2.1 | None |
SRR22424931 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11050744 | Sensitive | lineage4.1.2.1 | None |
ERR13273027 | Sensitive | lineage4.8 | None |
SRR24710079 | MDR-TB | lineage2.2.1 | None |
ERR229951 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None |
SRR13232780 | MDR-TB | lineage2.2.1 | None |
ERR8665975 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6896484 | Sensitive | lineage4.4.1.1 | None |
ERR8665969 | Pre-XDR-TB | lineage2.2.1 | None |
SRR24709976 | XDR-TB | lineage2.2.1 | None |
SRR7496516 | Sensitive | lineage2.2.1 | us |
ERR13232377 | Sensitive | lineage2.2.1 | None |
ERR4815057 | Sensitive | lineage4.8.2 | gb |
SRR25514970 | MDR-TB | lineage2.2.1 | None |
ERR13230064 | Sensitive | lineage2.2.2 | None |
ERR8665943 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4818857 | Sensitive | lineage4.1.2.1 | None |
SRR29050991 | HR-TB | lineage2.2.1.1 | None |
ERR4872196 | MDR-TB | lineage4.6.4 | None |
SRR25395643 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR2843519 | HR-TB | lineage2.2.1.1 | None |
SRR16058563 | Sensitive | lineage2.2.1 | None |
ERR11488986 | RR-TB | lineage4.9 | None |
SRR20969583 | Sensitive | lineage2.2.1 | None |
ERR13260394 | Sensitive | lineage4.1.2.1 | None |
ERR4828659 | Sensitive | lineage2.2.1 | vn |
ERR8665719 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665976 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11081204 | Sensitive | lineage4.7 | None |
ERR8665514 | Pre-XDR-TB | lineage2.2.1 | None |
SRR28706621 | MDR-TB | lineage2.2.1 | None |
SRR28393559 | MDR-TB | lineage2.2.1 | None |
SRR6045520 | RR-TB | lineage2.2.1 | gb |
SRR1166873 | MDR-TB | lineage2.2.1 | None |
SRR28393404 | Sensitive | lineage4.1.1;lineage4.3.3 | None |
SRR25515249 | Pre-XDR-TB | lineage2.2.1 | None |
SRR28393390 | MDR-TB | lineage2.2.1 | None |
ERR11775596 | Sensitive | lineage4.4.1.1 | None |
SRR28389837 | Sensitive | lineage4.3.4.2 | None |
ERR4827552 | Pre-XDR-TB | lineage2.2.1 | None |
ERR072044 | Sensitive | lineage4.8.2 | gb |
SAMEA2534400 | MDR-TB | lineage4.3.3 | uz |
SAMEA2535077 | MDR-TB | lineage4.3.3 | uz |
SRR2101377 | Sensitive | lineage4.4.1.1 | None |
ERR1193781 | MDR-TB | lineage4.3.4.2 | pt |
SRR16103889 | HR-TB | lineage2.2.1 | None |
SRR1162890 | MDR-TB | lineage2.2.1 | None |
SRR7496512 | Sensitive | lineage2.2.1 | us |
SRR16370670 | Pre-XDR-TB | lineage2.2.1 | None |
SRR16962415 | Sensitive | lineage4.8 | None |
ERR4800365 | Pre-XDR-TB | lineage2.2.1 | in |
ERR11082223 | Sensitive | lineage4.8 | None |
ERR9119594 | MDR-TB | lineage4.6.4 | None |
SRR13232507 | MDR-TB | lineage2.2.1 | None |
SRR13232531 | MDR-TB | lineage2.2.1 | None |
ERR13258455 | Pre-XDR-TB | lineage2.2.1 | None |
SRR27332283 | Sensitive | lineage4.6.3 | None |
ERR4822586 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | tm |
ERR553022 | MDR-TB | lineage4.3.3 | None |
SRR1723619 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR9738524 | MDR-TB | lineage4.7 | None |
ERR270698 | HR-TB | lineage4.5 | None |
ERR4796596 | Pre-XDR-TB | lineage2.2.1 | in |
SRR1166253 | MDR-TB | lineage4.4.1.1 | ro |
SRR13232579 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4821156 | Sensitive | lineage4.1.2.1 | gb |
ERR8665535 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665726 | Pre-XDR-TB | lineage2.2.1 | None |
ERR1633879 | Sensitive | lineage4.4.1.1 | za |
SRR21279458 | Sensitive | lineage2.2.1 | None |
SRR15368889 | Sensitive | lineage2.2.1 | None |
SRR6458411 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10306012 | MDR-TB | lineage2.2.1 | None |
SRR13232427 | Pre-XDR-TB | lineage2.2.1 | None |
SRR13232584 | Pre-XDR-TB | lineage2.2.1 | None |
SRR13232716 | Pre-XDR-TB | lineage2.2.1 | None |
ERR9285960 | Sensitive | lineage3.1.1 | None |
SAMN02419561 | Pre-XDR-TB | lineage2.2.1 | by |
SRR14164578 | Sensitive | lineage4.3.4.1 | None |
ERR8665576 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2517053 | MDR-TB | lineage2.2.1 | gb |
ERR8665661 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2513572 | MDR-TB | lineage2.2.1 | gb |
ERR9125543 | Sensitive | lineage2.2.1 | None |
ERR8665559 | Pre-XDR-TB | lineage2.2.1 | None |
SRR12142365 | Sensitive | lineage2.2.1 | None |
DRR474032 | Other | lineage2.2.1 | None |
ERR3287807 | MDR-TB | lineage2.2.1 | pe |
ERR4872131 | MDR-TB | lineage4.6.4 | None |
SRR13232578 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665629 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665674 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665677 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665807 | Pre-XDR-TB | lineage2.2.1 | None |
SRR21709330 | Sensitive | lineage2.2.1 | None |
SRR21277506 | Sensitive | lineage2.2.1.1 | None |
DRR189065 | Sensitive | lineage2.2.1 | None |
SRR7069914 | Sensitive | lineage3.1.2 | None |
ERR4822594 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | tm |
ERR9119537 | MDR-TB | lineage4.6.4 | None |
ERR8665875 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665662 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665546 | Pre-XDR-TB | lineage2.2.1 | None |
SRR25206908 | MDR-TB | lineage4.5 | None |
SRR15315759 | Sensitive | lineage2.2.1 | None |
SRR17658564 | Other | lineage3 | None |
ERR8665846 | Pre-XDR-TB | lineage2.2.1 | None |
SRR25534159 | MDR-TB | lineage2.2.1 | None |
SRR24466785 | Sensitive | lineage4.8 | None |
ERR9786276 | Sensitive | lineage4.8 | None |
ERR8665545 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665587 | HR-TB | lineage2.2.1 | None |
ERR4872187 | MDR-TB | lineage4.6.4 | None |
SRR5067401 | Other | lineage2.2.1 | vn |
SAMN02414925 | MDR-TB | lineage2.2.1 | se |
SRR13232765 | MDR-TB | lineage2.2.1 | None |
SRR14164882 | Sensitive | lineage4.3.4.1 | None |
ERR8665630 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1184120 | Pre-XDR-TB | lineage2.2.1 | None |
SRR23310880 | MDR-TB | lineage2.2.1 | None |
ERR553023 | MDR-TB | lineage4.3.3 | None |
ERR4799303 | Pre-XDR-TB | lineage2.2.1 | in |
SRR13232589 | Pre-XDR-TB | lineage2.2.1 | None |
SRR21277411 | Sensitive | lineage2.2.1 | None |
ERR13290772 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5866360 | MDR-TB | lineage2.2.1 | None |
SRR13232563 | MDR-TB | lineage2.2.1 | None |
ERR4828422 | HR-TB | lineage2.2.1.1 | vn |
ERR8665780 | MDR-TB | lineage2.2.1 | None |
ERR8665977 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29539324 | HR-TB | lineage4.2.1.1 | None |
SRR13232662 | Pre-XDR-TB | lineage2.2.1 | None |
SRR28858462 | MDR-TB | lineage4.9 | None |
ERR13291754 | Sensitive | lineage2.2.1 | None |
ERR8665532 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665772 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6797397 | Sensitive | lineage3 | None |
SRR13232750 | MDR-TB | lineage2.2.1 | None |
ERR4132449 | MDR-TB | lineage2.2.1 | None |
ERR8665950 | Pre-XDR-TB | lineage2.2.1 | None |
SRR13232678 | MDR-TB | lineage2.2.1 | None |
ERR12311952 | Sensitive | lineage4.4.1.1 | None |
SRR24256291 | Pre-XDR-TB | lineage2.2.1 | None |
SRR13232523 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11465897 | Sensitive | lineage4.4.1.1 | None |
ERR13260693 | Pre-XDR-TB | lineage4.3.3 | None |
ERR13284769 | MDR-TB | lineage4.1.2.1 | None |
ERR11775585 | Sensitive | lineage4.4.1.1 | None |
ERR8665731 | MDR-TB | lineage2.2.1 | None |
ERR8665887 | Pre-XDR-TB | lineage2.2.1 | None |
ERR551151 | HR-TB | lineage4.6.2.2 | None |
ERR5866361 | MDR-TB | lineage2.2.1 | None |
ERR4872121 | MDR-TB | lineage4.1.4 | None |
SRR28045689 | Sensitive | lineage3 | None |
ERR8665951 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665997 | Pre-XDR-TB | lineage2.2.1 | None |
ERR228028 | MDR-TB | lineage2.2.1 | ru |
SRR13232736 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8975591 | Sensitive | lineage2.2.1 | None |
SRR13232576 | Pre-XDR-TB | lineage2.2.1 | None |
ERR553023_ERR553022 | MDR-TB | lineage4.3.3 | None |
ERR11044747 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665974 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11798538 | MDR-TB | lineage2.2.1 | None |
SRR6824379 | Pre-XDR-TB | lineage2.2.1 | cn |
ERR13289704 | RR-TB | lineage2.2.1 | None |
ERR552079 | MDR-TB | lineage4.3.3 | None |
ERR2677465 | Sensitive | lineage4.8 | de |
SRR21277769 | Sensitive | lineage2.2.1 | None |
ERR1198986 | Sensitive | lineage4.6.1.1 | None |
ERR9119601 | MDR-TB | lineage4.6.4 | None |
ERR4797550 | Pre-XDR-TB | lineage2.2.1 | in |
SRR1159700 | Pre-XDR-TB | lineage2.2.1 | None |
SRR22249594 | Sensitive | lineage4.8 | None |
SRR29273683 | MDR-TB | lineage4.7 | None |
SRR5067674 | Sensitive | lineage4.5 | vn |
ERR11049278 | RR-TB | lineage4.8 | None |
SRR13232680 | MDR-TB | lineage2.2.1 | None |
SRR13232525 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11465076 | Sensitive | lineage2.2.1;lineage4.4.1.1 | None |
SRR5709806 | MDR-TB | lineage2.2.1 | th |
ERR4798413 | Pre-XDR-TB | lineage2.2.1 | in |
ERR9907720 | MDR-TB | lineage4.3.4.1 | None |
ERR495111 | Sensitive | lineage4.4.1.1 | None |
SRR6797368 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6964598 | RR-TB | lineage3 | None |
SRR21277178 | Other | lineage2.2.1 | None |
SRR1159977 | Pre-XDR-TB | lineage2.2.1 | None |
SRR22248484 | Sensitive | lineage4.1.1.3 | None |
SRR6785512 | Sensitive | lineage4.2.2 | None |
ERR1023409 | MDR-TB | lineage2.2.1 | None |
SRR24709966 | MDR-TB | lineage2.2.1 | None |
SRR7070027 | Sensitive | lineage3.1.2 | None |
ERR7911114 | Pre-XDR-TB | lineage2.2.1 | vn |
ERR3275459 | Sensitive | lineage2.2.1 | nl |
SRR13232462 | MDR-TB | lineage2.2.1 | None |
ERR11067183 | RR-TB | lineage4.8 | None |
SRR25515754 | MDR-TB | lineage2.2.1 | None |
ERR751558 | MDR-TB | lineage4.1.2.1 | pe |
SRR19241814 | Sensitive | lineage4.1.2.1 | None |