lineage | Count |
---|---|
lineage4.1.2.1 | 9 |
lineage2.2.1 | 148 |
lineage4.3.2 | 2 |
lineage2.2 | 2 |
lineage4.1.4 | 2 |
lineage4.6.4 | 8 |
lineage3.1.1 | 1 |
lineage4.3.4.1 | 3 |
lineage4.8 | 10 |
lineage4.4.1.1 | 7 |
lineage2.2.2 | 2 |
lineage3 | 3 |
lineage2.2.1.1 | 3 |
lineage4.1.1.3 | 1 |
lineage4.7 | 3 |
lineage4.3.3 | 3 |
lineage4.1.2 | 1 |
lineage4.8.2 | 2 |
lineage4.5 | 2 |
lineage4.1.2.1;lineage2.2.1 | 1 |
lineage4.6.1.1 | 1 |
lineage4.8;lineage2.2.1 | 2 |
lineage4.2 | 1 |
lineage4.3.4.2 | 1 |
spoligotype | Count |
---|---|
None | 218 |
ID | Drug resistance | Lineage | Country iso2 | ERR751558 | MDR-TB | lineage4.1.2.1 | pe | ERR8665514 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911114 | Pre-XDR-TB | lineage2.2.1 | vn | ERR776663 | MDR-TB | lineage4.3.2 | None | ERR8665513 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665535 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665532 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665531 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665576 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665559 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665546 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665545 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665588 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665587 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665589 | Pre-XDR-TB | lineage2.2 | None | ERR8665630 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665618 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665661 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665629 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665662 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665730 | MDR-TB | lineage2.2.1 | None | ERR8665673 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665674 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665677 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665718 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665719 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665678 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665727 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665927 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665726 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665771 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665807 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665826 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665846 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665875 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665935 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665731 | MDR-TB | lineage2.2.1 | None | ERR8665772 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665779 | MDR-TB | lineage2.2.1 | None | ERR8665780 | MDR-TB | lineage2.2.1 | None | ERR8665851 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665887 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665934 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665926 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665942 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665976 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665951 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665950 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665943 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665969 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665977 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665975 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665968 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665974 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119527 | MDR-TB | lineage4.1.4 | None | ERR8665997 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975591 | Sensitive | lineage2.2.1 | None | ERR9119537 | MDR-TB | lineage4.6.4 | None | ERR9119594 | MDR-TB | lineage4.6.4 | None | ERR9119585 | MDR-TB | lineage4.6.4 | None | ERR9285960 | Sensitive | lineage3.1.1 | None | ERR9119601 | MDR-TB | lineage4.6.4 | None | ERR9125543 | Sensitive | lineage2.2.1 | None | ERR9125754 | Sensitive | lineage2.2.1 | None | ERR9907720 | MDR-TB | lineage4.3.4.1 | None | ERR9286011 | MDR-TB | lineage2.2.1 | None | ERR9786276 | Sensitive | lineage4.8 | None | SRR10306012 | MDR-TB | lineage2.2.1 | None | SRR10303286 | MDR-TB | lineage2.2.1 | None | SRR1159700 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430363 | MDR-TB | lineage2.2.1 | None | SRR1159977 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162890 | MDR-TB | lineage2.2.1 | None | SRR1166253 | MDR-TB | lineage4.4.1.1 | ro | SRR13232525 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180937 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142365 | Sensitive | lineage2.2.1 | None | SRR13232427 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232462 | MDR-TB | lineage2.2.1 | None | SRR13232523 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166873 | MDR-TB | lineage2.2.1 | None | SRR1173184 | Pre-XDR-TB | lineage2.2.2 | None | SRR1184120 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232507 | MDR-TB | lineage2.2.1 | None | SRR13232531 | MDR-TB | lineage2.2.1 | None | SRR13232578 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232563 | MDR-TB | lineage2.2.1 | None | SRR13232576 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232584 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232579 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232589 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232658 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232632 | MDR-TB | lineage2.2.1 | None | SRR13232680 | MDR-TB | lineage2.2.1 | None | SRR13232662 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232678 | MDR-TB | lineage2.2.1 | None | SRR13232736 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232716 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232750 | MDR-TB | lineage2.2.1 | None | SRR13232765 | MDR-TB | lineage2.2.1 | None | SRR13232780 | MDR-TB | lineage2.2.1 | None | ERR11067650 | MDR-TB | lineage4.1.2.1 | None | SRR14164578 | Sensitive | lineage4.3.4.1 | None | SRR14165120 | Sensitive | lineage4.1.2.1 | None | SRR14164882 | Sensitive | lineage4.3.4.1 | None | SRR14801873 | Sensitive | lineage4.8 | None | SRR15315759 | Sensitive | lineage2.2.1 | None | SRR15368823 | Sensitive | lineage2.2.1 | None | SRR15368889 | Sensitive | lineage2.2.1 | None | SRR16058563 | Sensitive | lineage2.2.1 | None | SRR16057879 | Sensitive | lineage2.2.1 | None | SRR19241814 | Sensitive | lineage4.1.2.1 | None | SRR16156198 | RR-TB | lineage4.4.1.1 | None | SRR16370670 | Pre-XDR-TB | lineage2.2.1 | None | SRR16962415 | Sensitive | lineage4.8 | None | SRR17658564 | Other | lineage3 | None | ERR11050744 | Sensitive | lineage4.1.2.1 | None | SRR16103889 | HR-TB | lineage2.2.1 | None | SRR1765872 | Other | lineage2.2.1 | None | SRR18715256 | MDR-TB | lineage2.2.1 | None | SRR20969583 | Sensitive | lineage2.2.1 | None | SRR20632823 | Pre-XDR-TB | lineage2.2.2 | None | SRR21277506 | Sensitive | lineage2.2.1.1 | None | SRR21277178 | Sensitive | lineage2.2.1 | None | SRR21277411 | Sensitive | lineage2.2.1 | None | SRR2101377 | Sensitive | lineage4.4.1.1 | None | SRR21279458 | Sensitive | lineage2.2.1 | None | SRR21277769 | Sensitive | lineage2.2.1 | None | SRR21709330 | Sensitive | lineage2.2.1 | None | SRR21686096 | Sensitive | lineage2.2.1 | None | SRR22248484 | Sensitive | lineage4.1.1.3 | None | ERR1633879 | Sensitive | lineage4.4.1.1 | za | SRR22424931 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081204 | Sensitive | lineage4.7 | None | ERR11082223 | Sensitive | lineage4.8 | None | SRR6797368 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275459 | Sensitive | lineage2.2.1 | nl | SAMEA2534400 | MDR-TB | lineage4.3.3 | uz | SAMN02419561 | Pre-XDR-TB | lineage2.2.1 | by | ERR3148147 | RR-TB | lineage4.1.2 | None | ERR4815057 | Sensitive | lineage4.8.2 | gb | ERR2027249 | Sensitive | lineage4.1.2.1 | None | ERR2513572 | MDR-TB | lineage2.2.1 | gb | SAMN02414925 | MDR-TB | lineage2.2.1 | se | SAMEA2535077 | MDR-TB | lineage4.3.3 | uz | SRR5067674 | Sensitive | lineage4.5 | vn | ERR228028 | MDR-TB | lineage2.2.1 | ru | ERR229951 | MDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR4817296 | Sensitive | lineage4.1.2.1 | gb | ERR11049278 | RR-TB | lineage4.8 | None | ERR11067183 | RR-TB | lineage4.8 | None | ERR4818857 | Sensitive | lineage4.1.2.1 | None | SRR5067401 | Other | lineage2.2.1 | vn | ERR1198986 | Sensitive | lineage4.6.1.1 | None | ERR2516356 | MDR-TB | lineage2.2.1 | be | ERR4822586 | Pre-XDR-TB | lineage4.8;lineage2.2.1 | tm | ERR2517053 | MDR-TB | lineage2.2.1 | gb | ERR2446503 | Sensitive | lineage2.2.1 | nl | SRR6045520 | RR-TB | lineage2.2.1 | gb | SRR23310880 | MDR-TB | lineage2.2 | None | ERR4820776 | Pre-XDR-TB | lineage4.8 | gb | ERR2517145 | Sensitive | lineage2.2.1 | nl | SRR1723619 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4821156 | Sensitive | lineage4.1.2.1 | gb | ERR270698 | HR-TB | lineage4.5 | None | ERR4828659 | Sensitive | lineage2.2.1 | vn | SRR5709806 | MDR-TB | lineage2.2.1 | th | ERR279580 | Sensitive | lineage4.4.1.1 | None | ERR4828422 | HR-TB | lineage2.2.1.1 | vn | ERR4822594 | Pre-XDR-TB | lineage4.8;lineage2.2.1 | tm | ERR4827552 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046767 | RR-TB | lineage2.2.1 | None | ERR4829668 | Sensitive | lineage4.8 | it | SRR6896484 | Sensitive | lineage4.4.1.1 | None | SRR6458411 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458456 | MDR-TB | lineage2.2.1 | None | ERR2843519 | HR-TB | lineage2.2.1.1 | None | ERR4872121 | MDR-TB | lineage4.1.4 | None | ERR4872187 | MDR-TB | lineage4.6.4 | None | ERR4872196 | MDR-TB | lineage4.6.4 | None | ERR4872207 | MDR-TB | lineage4.6.4 | None | SRR6785512 | Sensitive | lineage4.2 | None | SRR6458448 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830963 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830961 | Pre-XDR-TB | lineage2.2.1 | np | ERR495111 | Sensitive | lineage4.4.1.1 | None | ERR4872131 | MDR-TB | lineage4.6.4 | None | ERR4972584 | MDR-TB | lineage4.3.2 | None | SRR6964598 | RR-TB | lineage3 | None | SRR6797397 | Sensitive | lineage3 | None | SRR6824443 | MDR-TB | lineage2.2.1 | cn | SRR6824379 | Pre-XDR-TB | lineage2.2.1 | cn | SRR7496512 | Sensitive | lineage2.2.1 | us | ERR2677465 | Sensitive | lineage4.8 | de | SRR1723857 | MDR-TB | lineage2.2.1 | cn | SRR7496516 | Sensitive | lineage2.2.1 | us | SRR7516420 | Sensitive | lineage4.8 | None | SRR9738524 | MDR-TB | lineage4.7 | None | SRR7592358 | MDR-TB | lineage4.7 | None | DRR189065 | Sensitive | lineage2.2.1 | None | DRR130091 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023409 | MDR-TB | lineage2.2.1 | None | ERR072044 | Sensitive | lineage4.8.2 | gb | ERR11044747 | Pre-XDR-TB | lineage2.2.1 | None | ERR1193781 | MDR-TB | lineage4.3.4.2 | pt | ERR5866362 | MDR-TB | lineage2.2.1 | None | ERR1193865 | MDR-TB | lineage4.3.3 | uz | ERR4132449 | MDR-TB | lineage2.2.1 | None | ERR4796596 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797535 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797550 | Pre-XDR-TB | lineage2.2.1 | in | ERR5866361 | MDR-TB | lineage2.2.1 | None | ERR3287807 | MDR-TB | lineage2.2.1 | pe | ERR4798413 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799303 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800209 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800365 | Pre-XDR-TB | lineage2.2.1 | in | ERR5866360 | MDR-TB | lineage2.2.1 | None |
---|