lineage | Count |
---|---|
lineage2.2.1 | 10 |
lineage3 | 7 |
lineage4.3.4.2.1 | 10 |
lineage2.2.2 | 6 |
lineage4.2.2 | 1 |
lineage2.2.1;lineage4.2 | 1 |
lineage4.9 | 1 |
lineage1.2.2.2 | 1 |
lineage4.5 | 1 |
lineage4.2.1 | 1 |
lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 40 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2516050 | HR-TB | lineage3 | za |
SAMN02403600 | MDR-TB | lineage4.3.4.2.1 | za |
SRR6896440 | HR-TB | lineage3 | None |
ERR4798456 | MDR-TB | lineage3 | in |
ERR5917997 | XDR-TB | lineage2.2.2 | za |
ERR2515261 | HR-TB | lineage3 | za |
ERR4798018 | Pre-XDR-TB | lineage2.2.1 | in |
SRR11662718 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4798290 | Pre-XDR-TB | lineage3 | in |
SRR25207059 | MDR-TB | lineage4.2.2 | None |
ERR5865973 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1169187 | MDR-TB | lineage4.3.4.2.1 | None |
ERR13288847 | XDR-TB | lineage2.2.2 | None |
SRR25207061 | MDR-TB | lineage2.2.1;lineage4.2 | None |
ERR4798273 | Pre-XDR-TB | lineage3 | in |
ERR2515725 | Pre-XDR-TB | lineage2.2.2 | za |
ERR4800644 | HR-TB | lineage4.9 | None |
SRR28409524 | HR-TB | lineage1.2.2.2 | None |
SRR16087971 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5758321 | Pre-XDR-TB | lineage2.2.2 | None |
ERR9992723 | XDR-TB | lineage2.2.2 | None |
SRR1167353 | MDR-TB | lineage4.3.4.2.1 | None |
ERR4797072 | Pre-XDR-TB | lineage2.2.1 | in |
SRR1165639 | MDR-TB | lineage4.3.4.2.1 | None |
SRR1169243 | MDR-TB | lineage4.3.4.2.1 | None |
SRR1169263 | MDR-TB | lineage4.3.4.2.1 | None |
SRR1167348 | MDR-TB | lineage4.3.4.2.1 | None |
SRR1172204 | MDR-TB | lineage4.3.4.2.1 | None |
ERR10112851 | XDR-TB | lineage2.2.1 | None |
SAMN02403601 | MDR-TB | lineage4.3.4.2.1 | za |
ERR2516066 | Pre-XDR-TB | lineage2.2.2 | za |
ERR3132082 | HR-TB | lineage4.5 | None |
SRR10380056 | Pre-XDR-TB | lineage4.2.1 | None |
SRR29681215 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1165627 | MDR-TB | lineage4.3.4.2.1 | None |
ERR13261347 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13291114 | XDR-TB | lineage2.1 | None |
SRR6896432 | HR-TB | lineage3 | None |
SRR11972411 | HR-TB | lineage2.2.1 | None |