lineage | Count |
---|---|
lineage2.2.1 | 10 |
lineage4.3.4.2.1 | 10 |
lineage2.2.2 | 6 |
lineage3 | 7 |
lineage4.2.2 | 1 |
lineage4.2.1 | 1 |
lineage2.2.1;lineage4.2 | 1 |
lineage1.2.2.2 | 1 |
lineage4.5 | 1 |
lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 39 |
ID | Drug resistance | Lineage | Country iso2 | ERR13261347 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165639 | MDR-TB | lineage4.3.4.2.1 | None | SRR1169263 | MDR-TB | lineage4.3.4.2.1 | None | ERR13288847 | XDR-TB | lineage2.2.2 | None | ERR2515261 | HR-TB | lineage3 | za | SRR16087971 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207059 | MDR-TB | lineage4.2.2 | None | SRR10380056 | Pre-XDR-TB | lineage4.2.1 | None | ERR9992723 | XDR-TB | lineage2.2.2 | None | ERR4797072 | Pre-XDR-TB | lineage2.2.1 | in | SRR1165627 | MDR-TB | lineage4.3.4.2.1 | None | SRR25207061 | MDR-TB | lineage2.2.1;lineage4.2 | None | ERR4798273 | Pre-XDR-TB | lineage3 | in | SRR11972411 | HR-TB | lineage2.2.1 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02403601 | MDR-TB | lineage4.3.4.2.1 | za | ERR2516050 | HR-TB | lineage3 | za | SRR28409524 | HR-TB | lineage1.2.2.2 | None | SAMN02403600 | MDR-TB | lineage4.3.4.2.1 | za | ERR4798018 | Pre-XDR-TB | lineage2.2.1 | in | SRR29681215 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798290 | Pre-XDR-TB | lineage3 | in | ERR3132082 | HR-TB | lineage4.5 | None | SRR1167353 | MDR-TB | lineage4.3.4.2.1 | None | ERR4800644 | HR-TB | lineage4.9 | None | SRR6896432 | HR-TB | lineage3 | None | ERR2515725 | Pre-XDR-TB | lineage2.2.2 | za | SRR1169243 | MDR-TB | lineage4.3.4.2.1 | None | SRR1167348 | MDR-TB | lineage4.3.4.2.1 | None | SRR1172204 | MDR-TB | lineage4.3.4.2.1 | None | ERR10112851 | XDR-TB | lineage2.2.1 | None | ERR2516066 | Pre-XDR-TB | lineage2.2.2 | za | SRR6896440 | HR-TB | lineage3 | None | ERR4798456 | MDR-TB | lineage3 | in | ERR5917997 | XDR-TB | lineage2.2.2 | za | SRR11662718 | Pre-XDR-TB | lineage2.2.1 | None | ERR5758321 | Pre-XDR-TB | lineage2.2.2 | None | ERR5865973 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169187 | MDR-TB | lineage4.3.4.2.1 | None |
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