lineage | Count |
---|---|
lineage2.2.2 | 191 |
lineage4.4.2;lineage4.9 | 1 |
lineage4.5 | 4 |
lineage4.1.1 | 2 |
La1.7;lineage2.2.2 | 1 |
lineage1.1.3.1 | 1 |
lineage2.2.1 | 2 |
spoligotype | Count |
---|---|
None | 202 |
ID | Drug resistance | Lineage | Country iso2 | SRR1049028 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049039 | MDR-TB | lineage2.2.2 | None | SRR1049069 | Pre-XDR-TB | lineage2.2.2 | None | SRR26387472 | MDR-TB | lineage2.2.2 | None | SRR16089538 | Sensitive | lineage2.2.2 | None | SRR6397697 | MDR-TB | lineage2.2.2 | ca | SRR1013627 | MDR-TB | lineage2.2.2 | None | SRR28239462 | Sensitive | lineage2.2.2 | None | SRR26387470 | MDR-TB | lineage2.2.2 | None | SRR067486 | Sensitive | lineage2.2.2 | None | ERR4195671 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049059 | Pre-XDR-TB | lineage2.2.2 | None | ERR11798524 | MDR-TB | lineage2.2.2 | None | SRR1013593 | MDR-TB | lineage2.2.2 | None | SRR28467020 | Pre-XDR-TB | lineage2.2.2 | None | SRR28467045 | MDR-TB | lineage2.2.2 | None | SRR1013555 | Pre-XDR-TB | lineage2.2.2 | None | ERR1213827 | Sensitive | lineage2.2.2 | kr | ERR3132100 | MDR-TB | lineage2.2.2 | None | ERR3132080 | MDR-TB | lineage2.2.2 | None | SRR1049045 | Pre-XDR-TB | lineage2.2.2 | None | SRR15316209 | Sensitive | lineage4.4.2;lineage4.9 | None | SRR7796667 | Pre-XDR-TB | lineage2.2.2 | None | DRR474022 | Sensitive | lineage2.2.2 | None | ERR13230057 | Other | lineage2.2.2 | None | SRR29053346 | Sensitive | lineage2.2.2 | None | ERR10465955 | Sensitive | lineage2.2.2 | None | ERR13232608 | MDR-TB | lineage2.2.2 | None | SRR30180419 | MDR-TB | lineage4.5 | None | SRR1048979 | MDR-TB | lineage2.2.2 | None | SRR11033603 | Sensitive | lineage2.2.2 | None | SRR29055382 | Sensitive | lineage2.2.2 | None | SRR23691399 | Sensitive | lineage2.2.2 | None | SRR21675639 | Sensitive | lineage2.2.2 | None | SRR26387495 | MDR-TB | lineage2.2.2 | None | SRR16088007 | Sensitive | lineage2.2.2 | None | SAMN02360557 | Pre-XDR-TB | lineage2.2.2 | kr | SRR26387497 | MDR-TB | lineage2.2.2 | None | SRR23862060 | Sensitive | lineage2.2.2 | None | SRR30182620 | HR-TB | lineage2.2.2 | None | SRR26112807 | Sensitive | lineage2.2.2 | None | SAMN02398699 | Pre-XDR-TB | lineage2.2.2 | kr | DRR473915 | HR-TB | lineage2.2.2 | None | ERR3132282 | Sensitive | lineage2.2.2 | None | SRR069947 | Sensitive | lineage2.2.2 | None | ERR13243575 | MDR-TB | lineage2.2.2 | None | SRR067489 | Sensitive | lineage2.2.2 | None | DRR130192 | Pre-XDR-TB | lineage2.2.2 | None | SRR26111905 | Sensitive | lineage4.1.1 | None | ERR3132278 | Sensitive | lineage2.2.2 | None | SAMN02360555 | Pre-XDR-TB | lineage2.2.2 | kr | DRR130165 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013552 | Pre-XDR-TB | lineage2.2.2 | None | SRR067502 | Sensitive | lineage2.2.2 | None | SRR070032 | Sensitive | lineage2.2.2 | None | SRR1048854 | Pre-XDR-TB | lineage2.2.2 | None | SRR067468 | Sensitive | lineage2.2.2 | None | SRR1049058 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049047 | Pre-XDR-TB | lineage2.2.2 | None | ERR3132074 | MDR-TB | lineage2.2.2 | None | SRR29093925 | MDR-TB | lineage2.2.2 | None | ERR13230578 | Sensitive | La1.7;lineage2.2.2 | None | ERR13258464 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013594 | MDR-TB | lineage2.2.2 | None | SRR1013551 | Pre-XDR-TB | lineage2.2.2 | None | SRR069941 | Sensitive | lineage2.2.2 | None | SRR067493 | Sensitive | lineage2.2.2 | None | SRR29093926 | MDR-TB | lineage2.2.2 | None | SRR6650411 | Sensitive | lineage1.1.3.1 | None | DRR130098 | MDR-TB | lineage2.2.2 | None | ERR13243548 | MDR-TB | lineage2.2.2 | None | ERR4822348 | MDR-TB | lineage2.2.2 | None | SRR1049020 | Pre-XDR-TB | lineage2.2.2 | None | SRR28239978 | Sensitive | lineage2.2.2 | None | SRR29225203 | HR-TB | lineage2.2.2 | None | SRR29225201 | HR-TB | lineage2.2.2 | None | SRR29681403 | Pre-XDR-TB | lineage2.2.2 | None | SRR29093358 | MDR-TB | lineage2.2.2 | None | SRR30333231 | Sensitive | lineage2.2.2 | None | SRR26387496 | MDR-TB | lineage2.2.2 | None | SRR067488 | Sensitive | lineage2.2.2 | None | SAMN02360610 | Pre-XDR-TB | lineage2.2.2 | kr | SRR1049044 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013648 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013682 | Pre-XDR-TB | lineage2.2.2 | None | SRR29093380 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013628 | MDR-TB | lineage2.2.2 | None | ERR11138629 | Sensitive | lineage2.2.2 | None | SRR28467071 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048978 | MDR-TB | lineage2.2.2 | None | SRR1013632 | Pre-XDR-TB | lineage2.2.2 | None | ERR028623 | HR-TB | lineage2.2.2 | None | SAMN02360604 | Pre-XDR-TB | lineage2.2.2 | kr | SRR21709347 | HR-TB | lineage2.2.2 | None | SRR21714042 | Sensitive | lineage2.2.2 | None | SRR26387475 | MDR-TB | lineage2.2.2 | None | SAMN02360603 | Pre-XDR-TB | lineage2.2.2 | kr | DRR130096 | Pre-XDR-TB | lineage2.2.2 | None | ERR11069075 | MDR-TB | lineage2.2.2 | None | ERR11081550 | MDR-TB | lineage2.2.2 | None | SRR7796668 | Pre-XDR-TB | lineage2.2.2 | None | SRR26112739 | Sensitive | lineage2.2.2 | None | ERR11069054 | MDR-TB | lineage2.2.2 | None | SRR1013626 | Pre-XDR-TB | lineage2.2.2 | None | SRR8758892 | MDR-TB | lineage2.2.2 | None | ERR11082603 | Sensitive | lineage2.2.2 | None | SRR1049024 | MDR-TB | lineage2.2.2 | None | SRR1049029 | Pre-XDR-TB | lineage2.2.2 | None | SRR18591743 | HR-TB | lineage2.2.2 | None | SRR29093912 | MDR-TB | lineage2.2.2 | None | SRR26112246 | Sensitive | lineage4.1.1 | None | SRR18591744 | MDR-TB | lineage2.2.2 | None | ERR1213851 | MDR-TB | lineage2.2.2 | kr | ERR2516692 | MDR-TB | lineage2.2.2 | nl | ERR025439 | HR-TB | lineage2.2.2 | nl | SRR1013644 | MDR-TB | lineage2.2.2 | None | SRR1049025 | MDR-TB | lineage2.2.2 | None | SRR1049046 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013649 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013683 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049068 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049019 | Pre-XDR-TB | lineage2.2.2 | None | ERR400424 | Sensitive | lineage2.2.2 | gb | DRR474026 | Sensitive | lineage2.2.2 | None | ERR8665907 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093939 | MDR-TB | lineage2.2.2 | None | SRR28240136 | Sensitive | lineage2.2.2 | None | ERR3132076 | MDR-TB | lineage2.2.2 | None | SRR1013625 | Pre-XDR-TB | lineage2.2.2 | None | SRR067547 | Sensitive | lineage2.2.2 | None | ERR11043495 | MDR-TB | lineage2.2.2 | None | DRR130095 | Pre-XDR-TB | lineage2.2.2 | None | SRR28240191 | Sensitive | lineage2.2.2 | None | SRR069934 | Sensitive | lineage2.2.2 | None | ERR1213853 | MDR-TB | lineage2.2.2 | kr | SAMN02360594 | MDR-TB | lineage2.2.2 | kr | ERR403246 | Sensitive | lineage2.2.2 | None | ERR13284063 | MDR-TB | lineage2.2.2 | None | SAMN02360576 | MDR-TB | lineage2.2.2 | kr | SRR26387474 | MDR-TB | lineage2.2.2 | None | SRR28170731 | Sensitive | lineage2.2.2 | None | SRR1049038 | MDR-TB | lineage2.2.2 | None | ERR13291080 | Pre-XDR-TB | lineage4.5 | None | DRR130191 | Pre-XDR-TB | lineage2.2.2 | None | ERR13291094 | MDR-TB | lineage4.5 | None | SRR28467054 | HR-TB | lineage2.2.2 | None | ERR13194014 | HR-TB | lineage2.2.2 | None | SRR1048850 | Pre-XDR-TB | lineage2.2.2 | None | SRR29225202 | HR-TB | lineage2.2.2 | None | SRR17657925 | MDR-TB | lineage2.2.2 | None | ERR13243562 | MDR-TB | lineage2.2.2 | None | ERR13243569 | Pre-XDR-TB | lineage2.2.2 | None | ERR13231249 | Sensitive | lineage2.2.2 | None | ERR8665906 | Pre-XDR-TB | lineage2.2.1 | None | SRR069982 | Sensitive | lineage2.2.2 | None | ERR13265638 | Sensitive | lineage2.2.2 | None | SRR070000 | Sensitive | lineage2.2.2 | None | SRR26112099 | Sensitive | lineage2.2.2 | None | ERR11043658 | MDR-TB | lineage2.2.2 | None | SRR067484 | Sensitive | lineage2.2.2 | None | SRR26387473 | MDR-TB | lineage2.2.2 | None | ERR1213830 | Sensitive | lineage2.2.2 | kr | SRR21747073 | MDR-TB | lineage4.5 | None | SRR1013645 | MDR-TB | lineage2.2.2 | None | ERR9124885 | MDR-TB | lineage2.2.2 | None | ERR13194006 | MDR-TB | lineage2.2.2 | None | ERR1213865 | MDR-TB | lineage2.2.2 | kr | SRR1013650 | Pre-XDR-TB | lineage2.2.2 | None | SRR26387499 | MDR-TB | lineage2.2.2 | None | SRR22251534 | HR-TB | lineage2.2.2 | None | DRR130190 | Pre-XDR-TB | lineage2.2.2 | None | SRR067534 | Sensitive | lineage2.2.2 | None | SRR28859992 | Sensitive | lineage2.2.2 | None | ERR13254328 | MDR-TB | lineage2.2.2 | None | SRR16058414 | MDR-TB | lineage2.2.2 | None | SRR069922 | Sensitive | lineage2.2.2 | None | ERR867562 | Sensitive | lineage2.2.2 | None | ERR2516143 | Pre-XDR-TB | lineage2.2.2 | es | SRR1013662 | Pre-XDR-TB | lineage2.2.2 | None | SRR6930929 | HR-TB | lineage2.2.2 | None | SRR26397807 | Sensitive | lineage2.2.2 | None | SRR29681255 | Pre-XDR-TB | lineage2.2.2 | None | ERR11050001 | Sensitive | lineage2.2.2 | None | SRR1013631 | Pre-XDR-TB | lineage2.2.2 | None | SRR1144737 | Pre-XDR-TB | lineage2.2.2 | None | ERR867556 | Sensitive | lineage2.2.2 | None | SRR1013651 | Pre-XDR-TB | lineage2.2.2 | None | SRR18591741 | MDR-TB | lineage2.2.2 | None | SRR14520034 | Sensitive | lineage2.2.2 | None | SRR069930 | Sensitive | lineage2.2.2 | None | ERR11083136 | MDR-TB | lineage2.2.2 | None | SAMN02360593 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02360601 | MDR-TB | lineage2.2.2 | kr | ERR11138637 | MDR-TB | lineage2.2.2 | None | SAMN02360616 | Pre-XDR-TB | lineage2.2.2 | kr | ERR11775684 | Sensitive | lineage2.2.2 | None | SRR18591742 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013556 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048851 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360596 | Pre-XDR-TB | lineage2.2.2 | kr | DRR130097 | Pre-XDR-TB | lineage2.2.2 | None | SRR21677625 | MDR-TB | lineage2.2.2 | None |
---|