lineage | Count |
---|---|
lineage4.4.2;lineage2.2.1 | 1 |
lineage2.2.2 | 40 |
lineage4.5 | 2 |
lineage4 | 1 |
lineage2.2 | 9 |
lineage4.9 | 2 |
lineage4;lineage2.2.2 | 1 |
1 | |
lineage1.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 58 |
ID | Drug resistance | Lineage | Country iso2 | SRR20969357 | HR-TB | lineage4.4.2;lineage2.2.1 | None | SAMN02360561 | MDR-TB | lineage2.2.2 | kr | SAMN02360619 | Pre-XDR-TB | lineage2.2.2 | kr | ERR023256 | Other | lineage4.5 | None | SAMN02360551 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02398712 | Pre-XDR-TB | lineage2.2.2 | kr | ERR023253 | HR-TB | lineage4 | None | SRR1013544 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013543 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013563 | MDR-TB | lineage2.2.2 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013564 | MDR-TB | lineage2.2.2 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1048842 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013669 | Pre-XDR-TB | lineage2.2 | None | SRR1013679 | Pre-XDR-TB | lineage2.2 | None | SRR1013680 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048843 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013668 | Pre-XDR-TB | lineage2.2 | None | SRR1047982 | Sensitive | lineage4.9 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048863 | MDR-TB | lineage2.2.2 | None | SRR1048864 | MDR-TB | lineage2.2.2 | None | SRR1048885 | MDR-TB | None | SRR1049062 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1047984 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049063 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049075 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049074 | Pre-XDR-TB | lineage2.2.2 | None | SRR1144776 | Pre-XDR-TB | lineage2.2.2 | None | SRR1144749 | Pre-XDR-TB | lineage2.2.2 | None | SRR1144790 | Pre-XDR-TB | lineage2.2.2 | None | SRR1144780 | Pre-XDR-TB | lineage2.2.2 | None | SRR1144783 | Pre-XDR-TB | lineage2.2.2 | None | ERR11138648 | Pre-XDR-TB | lineage2.2.2 | None | SRR1144813 | Pre-XDR-TB | lineage2.2.2 | None | SRR1144807 | Pre-XDR-TB | lineage2.2.2 | None | SRR21576583 | Pre-XDR-TB | lineage1.2.1.2 | None | ERR11138658 | Pre-XDR-TB | lineage2.2.2 | None | ERR11138650 | Pre-XDR-TB | lineage2.2.2 | None | ERR11138653 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02398698 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR234229 | Other | lineage4.5 | cn | SAMN02398704 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02360613 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02398711 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02398693 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02398713 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02398696 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None |
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