Rv2780 - c.436_437dupGC


Drug resistance types
0 Sensitive 0 RR-TB 1 HR-TB 14 MDR-TB 107 Pre-XDR-TB 6 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.3.3 21
lineage4.2.1 14
lineage2.2.1 29
lineage4.1.1.3 5
lineage3 8
lineage4.1.2.1 3
lineage4.8.1 1
lineage2.2.2 14
lineage4.5 3
lineage4.3 1
lineage4.8 9
lineage4.3.2 5
lineage4.2;lineage2.2.1 1
lineage4.2.1;lineage2.2.1 2
lineage4.2.1.1 1
lineage4 1
lineage4.2.2.2 1
lineage1.1.2 1
lineage4.3.4.1 1
lineage4.4.1.1.1 1
lineage4.3.3;lineage4.2.1 2
lineage2.2 1
lineage4.4.1.1 2
lineage4.3.4.2 1
spoligotype Counts
spoligotype Count
None 128
Geographic prevalence
Country level data for this variant is available for 30 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3544717 Pre-XDR-TB lineage4.3.3 None
ERR1664663 MDR-TB lineage4.2.1 None
ERR1664653 MDR-TB lineage4.2.1 None
ERR1664643 MDR-TB lineage4.2.1 None
ERR4813100 Pre-XDR-TB lineage2.2.1 pe
SAMN02585960 Pre-XDR-TB lineage4.3.3 za
ERR4813219 Pre-XDR-TB lineage4.1.1.3 None
SAMN02628522 Pre-XDR-TB lineage3 ir
ERR133887 Pre-XDR-TB lineage4.3.3 ru
ERR2184286 Pre-XDR-TB lineage4.1.2.1 pe
SAMN02350422 Pre-XDR-TB lineage4.3.3 za
ERR2510654 Pre-XDR-TB lineage2.2.1 it
ERR552809 Pre-XDR-TB lineage4.8.1 sz
SAMN02403631 Pre-XDR-TB lineage2.2.2 za
SRR847779_SRR924227 Pre-XDR-TB lineage4.3.3 None
SRR5152957 Pre-XDR-TB lineage2.2.1 None
ERR2515541 XDR-TB lineage2.2.2 za
ERR4822369 Pre-XDR-TB lineage4.5 None
SRR23310883 MDR-TB lineage4.2.1 None
ERR2516738 Pre-XDR-TB lineage4.1.2.1 pe
SRR23311066 MDR-TB lineage4.2.1 None
ERR4830767 Pre-XDR-TB lineage4.3 ir
ERR2864220 MDR-TB lineage4.2.1 pt
ERR4830950 Pre-XDR-TB lineage2.2.1 np
ERR4830778 Pre-XDR-TB lineage4.5 None
SRR6356936 Pre-XDR-TB lineage4.8 None
SRR6356969 Pre-XDR-TB lineage2.2.1 None
ERR4830942 Pre-XDR-TB lineage2.2.1 np
SRR6356930 Pre-XDR-TB lineage4.8 None
SRR6356943 Pre-XDR-TB lineage2.2.1 None
ERR4831271 MDR-TB lineage4.8 de
ERR4972474 MDR-TB lineage4.3.2 None
ERR4972491 Pre-XDR-TB lineage4.3.2 None
SRR6807746 Pre-XDR-TB lineage4.2.1 None
ERR4972536 XDR-TB lineage4.3.2 None
ERR4972528 Pre-XDR-TB lineage4.3.3 None
SRR7755647 Pre-XDR-TB lineage2.2.1 None
SRR924228 Pre-XDR-TB lineage4.3.3 None
SRR924227 Pre-XDR-TB lineage4.3.3 None
SRR847779 Pre-XDR-TB lineage4.3.3 za
SRR847783 Pre-XDR-TB lineage4.3.3 za
SRR7341679 MDR-TB lineage4.8 ro
SRR8357447 Pre-XDR-TB lineage2.2.1 None
SRR7646051 Pre-XDR-TB lineage4.2;lineage2.2.1 None
SRR7755686 Pre-XDR-TB lineage2.2.1 None
ERR1035312 Pre-XDR-TB lineage4.3.3 br
SRR7755689 Pre-XDR-TB lineage4.2.1;lineage2.2.1 None
SRR7755731 Pre-XDR-TB lineage2.2.1 None
DRR130106 Pre-XDR-TB lineage4.5 None
ERR1035304 MDR-TB lineage4.3.3 br
SRR7755763 Pre-XDR-TB lineage2.2.1 None
ERR10748499 Pre-XDR-TB lineage2.2.2 None
ERR4423616 Pre-XDR-TB lineage4.3.2 None
ERR10762311 Pre-XDR-TB lineage4.2.1;lineage2.2.1 None
ERR4011119 Pre-XDR-TB lineage2.2.2 None
ERR4276875 MDR-TB lineage4.8 None
ERR10762383 Pre-XDR-TB lineage4.2.1 None
ERR11043789 MDR-TB lineage4.2.1.1 None
ERR3287846 XDR-TB lineage4 pe
ERR3794398 Pre-XDR-TB lineage2.2.1 None
ERR4276876 MDR-TB lineage4.8 None
ERR4798314 Pre-XDR-TB lineage4.2.2.2 in
ERR4797944 Pre-XDR-TB lineage2.2.1 in
ERR4796896 XDR-TB lineage4.8 in
ERR5897092 Pre-XDR-TB lineage3 None
ERR4812297 Pre-XDR-TB lineage4.1.1.3 None
ERR5864811 Pre-XDR-TB lineage4.3.3 None
ERR4799443 Pre-XDR-TB lineage1.1.2 in
ERR5897080 Pre-XDR-TB lineage3 None
ERR5897091 Pre-XDR-TB lineage3 None
ERR8975695 Pre-XDR-TB lineage4.3.3 None
ERR7361966 Pre-XDR-TB lineage2.2.2 None
ERR7911708 Pre-XDR-TB lineage4.1.1.3 za
ERR8665675 Pre-XDR-TB lineage2.2.1 None
ERR9907792 Pre-XDR-TB lineage4.3.4.1 None
ERR8975724 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9992706 Pre-XDR-TB lineage2.2.2 None
SRR10379898 Pre-XDR-TB lineage2.2.1 None
ERR9993114 Pre-XDR-TB lineage4.1.1.3 None
SRR1011463 Pre-XDR-TB lineage4.3.3 None
SRR10380018 Pre-XDR-TB lineage4.2.1 None
SRR10379908 XDR-TB lineage4.2.1 None
SRR1175523 Pre-XDR-TB lineage2.2.2 None
SRR10397238 Pre-XDR-TB lineage4.3.3;lineage4.2.1 None
SRR1062835 Pre-XDR-TB lineage4.3.3 None
SRR10808353 Pre-XDR-TB lineage4.1.2.1 None
SRR1166094 Pre-XDR-TB lineage4.8 ro
SRR1172065 Pre-XDR-TB lineage3 None
SRR1166130 MDR-TB lineage4.8 ro
SRR1166303 Pre-XDR-TB lineage2.2.1 None
SRR1169159 Pre-XDR-TB lineage2.2.1 None
SRR1172075 Pre-XDR-TB lineage3 None
SRR1175524 Pre-XDR-TB lineage2.2.2 None
SRR1180403 Pre-XDR-TB lineage4.3.3 None
SRR1180179 Pre-XDR-TB lineage3 None
SRR1180328 Pre-XDR-TB lineage4.3.3 None
SRR1175494 Pre-XDR-TB lineage2.2 None
SRR1175492 Pre-XDR-TB lineage2.2.2 None
SRR13870379 Pre-XDR-TB lineage4.3.3 None
SRR1181321 Pre-XDR-TB lineage4.3.3 None
SRR1182985 Pre-XDR-TB lineage3 None
SRR13232623 Pre-XDR-TB lineage2.2.1 None
SRR13232648 Pre-XDR-TB lineage2.2.1 None
SRR13423564 Pre-XDR-TB lineage2.2.1 None
SRR1181260 Pre-XDR-TB lineage4.3.3 None
SRR13312530 Pre-XDR-TB lineage4.3.3;lineage4.2.1 None
SRR13423554 Pre-XDR-TB lineage2.2.1 None
SRR14782156 Pre-XDR-TB lineage2.2.1 None
SRR14781924 Pre-XDR-TB lineage2.2.1 None
SRR14782700 XDR-TB lineage4.2.1 None
SRR14782279 Pre-XDR-TB lineage4.2.1 None
SRR14801569 Pre-XDR-TB lineage4.2.1 None
SRR14782693 Pre-XDR-TB lineage4.2.1 None
SRR15364444 Pre-XDR-TB lineage2.2.1 None
SRR14807583 Pre-XDR-TB lineage2.2.1 None
SRR14802053 Pre-XDR-TB lineage2.2.1 None
ERR8025419 Pre-XDR-TB lineage2.2.2 None
SRR16089401 Pre-XDR-TB lineage4.4.1.1 None
SRR16370615 Pre-XDR-TB lineage4.4.1.1 None
ERR4813820 Pre-XDR-TB lineage4.3.2 None
ERR8025434 Pre-XDR-TB lineage2.2.2 None
ERR8025584 Pre-XDR-TB lineage2.2.2 None
ERR1873431 Pre-XDR-TB lineage2.2.1 None
ERR5758442 Pre-XDR-TB lineage2.2.2 None
ERR9806943 Pre-XDR-TB lineage4.1.1.3 None
ERR5758445 Pre-XDR-TB lineage2.2.2 None
ERR4813840 HR-TB lineage4.3.4.2 None
SAMN02584596 Pre-XDR-TB lineage2.2.1 md