Rv2780 - c.436_437dupGC


Drug resistance types
0 Sensitive 0 RR-TB 4 HR-TB 16 MDR-TB 124 Pre-XDR-TB 12 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.3.4.2.1 2
lineage2.2.1 34
lineage4.5 4
lineage3 7
lineage4.3.2 6
lineage4.3.3 35
lineage2.2.2 14
lineage4.2.1 14
lineage4.8.1 1
lineage4.8 10
lineage4.1.1.1 1
lineage4.1.1.3 6
lineage4.2.1;lineage4.3.3 2
lineage4.3.4.2 1
lineage4 1
lineage4.4.1.1 3
lineage4.3.4.1 1
lineage4.3 2
lineage2.2.1;lineage4.2.1 2
lineage2.2.1;lineage4.2 1
lineage4.2.1.1 1
lineage4.1.2.1 4
lineage1.1.2 1
lineage4.4.1.1.1 1
lineage4.2.2.2 1
lineage1.2.2.2;lineage2.2.1;lineage3 1
spoligotype Counts
spoligotype Count
None 156
Geographic prevalence
Country level data for this variant is available for 29 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11488562 MDR-TB lineage4.3.4.2.1 None
ERR4797944 Pre-XDR-TB lineage2.2.1 in
ERR4822369 Pre-XDR-TB lineage4.5 None
SAMN02628522 Pre-XDR-TB lineage3 ir
SRR15364444 Pre-XDR-TB lineage2.2.1 None
ERR4423616 Pre-XDR-TB lineage4.3.2 None
SRR13870379 Pre-XDR-TB lineage4.3.3 None
ERR8025434 Pre-XDR-TB lineage2.2.2 None
SRR14802053 Pre-XDR-TB lineage2.2.1 None
SRR1011463 Pre-XDR-TB lineage4.3.3 None
ERR5864810 XDR-TB lineage4.3.3 None
SRR24709991 Pre-XDR-TB lineage4.3.3 None
ERR4972474 MDR-TB lineage4.3.2 None
ERR8025419 Pre-XDR-TB lineage2.2.2 None
ERR5758445 Pre-XDR-TB lineage2.2.2 None
SRR13312538 Pre-XDR-TB lineage4.3.3 None
SRR10147685 Pre-XDR-TB lineage4.5 None
SRR5152957 Pre-XDR-TB lineage2.2.1 None
ERR133887 Pre-XDR-TB lineage4.3.3 ru
SRR1062835 Pre-XDR-TB lineage4.3.3 None
ERR10762383 Pre-XDR-TB lineage4.2.1 None
ERR10748499 XDR-TB lineage2.2.2 None
SRR1169159 Pre-XDR-TB lineage2.2.1 None
ERR015611 Pre-XDR-TB lineage2.2.1 None
ERR552809 Pre-XDR-TB lineage4.8.1 sz
SAMN02403631 Pre-XDR-TB lineage2.2.2 za
SRR3544717 Pre-XDR-TB lineage4.3.3 None
ERR1035312 Pre-XDR-TB lineage4.3.3 br
ERR1873431 Pre-XDR-TB lineage2.2.1 None
SRR1166094 Pre-XDR-TB lineage4.8 ro
SRR1182985 Pre-XDR-TB lineage3 None
ERR7361966 Pre-XDR-TB lineage2.2.2 None
ERR4972536 HR-TB lineage4.3.2 None
SRR13232623 Pre-XDR-TB lineage2.2.1 None
ERR9992706 XDR-TB lineage2.2.2 None
ERR11773737 Pre-XDR-TB lineage4.3.3 None
SRR28339299 Pre-XDR-TB lineage2.2.1 None
SRR28498675 Pre-XDR-TB lineage4.2.1 None
SRR28498573 Pre-XDR-TB lineage4.2.1 None
SRR28339300 Pre-XDR-TB lineage2.2.1 None
ERR11489025 Pre-XDR-TB lineage4.1.1.1 None
ERR4830778 Pre-XDR-TB lineage4.5 None
SRR1175524 Pre-XDR-TB lineage2.2.2 None
SAMN02584596 Pre-XDR-TB lineage2.2.1 md
SRR6356943 Pre-XDR-TB lineage2.2.1 None
ERR4796896 XDR-TB lineage4.8 in
ERR9806943 Pre-XDR-TB lineage4.1.1.3 None
SRR10397238 Pre-XDR-TB lineage4.2.1;lineage4.3.3 None
ERR1664653 MDR-TB lineage4.2.1 None
SRR13423564 Pre-XDR-TB lineage2.2.1 None
SRR13312534 Pre-XDR-TB lineage4.3.3 None
ERR4813840 HR-TB lineage4.3.4.2 None
SRR7755686 Pre-XDR-TB lineage2.2.1 None
ERR4830950 XDR-TB lineage2.2.1 np
SRR14781924 Pre-XDR-TB lineage2.2.1 None
SRR14807583 Pre-XDR-TB lineage2.2.1 None
SRR23311066 Pre-XDR-TB lineage4.2.1 None
ERR3287846 Pre-XDR-TB lineage4 pe
SRR13312531 Pre-XDR-TB lineage4.3.3 None
ERR4813219 Pre-XDR-TB lineage4.1.1.3 None
SRR8357447 Pre-XDR-TB lineage2.2.1 None
SRR1175523 Pre-XDR-TB lineage2.2.2 None
SRR14782700 XDR-TB lineage4.2.1 None
ERR4011119 Pre-XDR-TB lineage2.2.2 None
SRR13312533 Pre-XDR-TB lineage4.3.3 None
SRR1180328 Pre-XDR-TB lineage4.3.3 None
SRR1166130 MDR-TB lineage4.8 ro
SRR1181260 Pre-XDR-TB lineage4.3.3 None
SRR7341679 MDR-TB lineage4.8 ro
ERR5864811 Pre-XDR-TB lineage4.3.3 None
SRR13423554 Pre-XDR-TB lineage2.2.1 None
SAMN02350422 Pre-XDR-TB lineage4.3.3 za
SRR7653018 Pre-XDR-TB lineage4.3.3 None
SRR16370615 Pre-XDR-TB lineage4.4.1.1 None
SRR7755763 Pre-XDR-TB lineage2.2.1 None
SRR1180403 Pre-XDR-TB lineage4.3.3 None
SRR11662408 Pre-XDR-TB lineage2.2.1 None
ERR4276875 MDR-TB lineage4.8 None
SRR24256065 MDR-TB lineage4.3.3 None
ERR9907792 Pre-XDR-TB lineage4.3.4.1 None
SAMN01925660 Pre-XDR-TB lineage4.3.3 None
ERR2510654 Pre-XDR-TB lineage2.2.1 it
SRR10147697 Pre-XDR-TB lineage4.3 None
ERR10762311 Pre-XDR-TB lineage2.2.1;lineage4.2.1 None
SRR7646051 Pre-XDR-TB lineage2.2.1;lineage4.2 None
SRR1166303 Pre-XDR-TB lineage2.2.1 None
ERR4972528 Pre-XDR-TB lineage4.3.3 None
SRR14782156 Pre-XDR-TB lineage2.2.1 None
ERR11043789 MDR-TB lineage4.2.1.1 None
ERR2515541 XDR-TB lineage2.2.2 za
ERR4813820 Pre-XDR-TB lineage4.3.2 None
SRR11662327 Pre-XDR-TB lineage2.2.1 None
ERR4831271 MDR-TB lineage4.8 de
SRR16089401 Pre-XDR-TB lineage4.4.1.1 None
SRR6356969 Pre-XDR-TB lineage2.2.1 None
DRR130106 Pre-XDR-TB lineage4.5 None
SRR10380018 Pre-XDR-TB lineage4.2.1 None
SRR13312539 Pre-XDR-TB lineage4.3.3 None
ERR4276876 MDR-TB lineage4.8 None
SRR6356936 Pre-XDR-TB lineage4.8 None
SRR13312535 Pre-XDR-TB lineage4.3.3 None
ERR4830942 Pre-XDR-TB lineage2.2.1 np
ERR12118032 Pre-XDR-TB lineage4.1.1.3 None
ERR11488984 XDR-TB lineage4.3.2 None
SRR10808353 Pre-XDR-TB lineage4.1.2.1 None
ERR1664663 MDR-TB lineage4.2.1 None
SRR24256254 Pre-XDR-TB lineage4.3.3 None
ERR1664643 MDR-TB lineage4.2.1 None
SRR13312532 Pre-XDR-TB lineage4.3.3 None
ERR4812297 Pre-XDR-TB lineage4.1.1.3 None
ERR5897080 Pre-XDR-TB lineage3 None
SRR7755731 Pre-XDR-TB lineage2.2.1 None
SRR1175494 Pre-XDR-TB lineage2.2.2 None
ERR11466311 MDR-TB lineage4.3.4.2.1 None
ERR4813100 Pre-XDR-TB lineage2.2.1 pe
SRR24466786 Pre-XDR-TB lineage4.8 None
SRR847779 Pre-XDR-TB lineage4.3.3 za
SAMN01925661 Pre-XDR-TB lineage4.3.3 None
SRR23310883 HR-TB lineage4.2.1 None
ERR2184286 Pre-XDR-TB lineage4.1.2.1 pe
SRR14782279 Pre-XDR-TB lineage4.2.1 None
SRR13312530 Pre-XDR-TB lineage4.2.1;lineage4.3.3 None
ERR4972491 Pre-XDR-TB lineage4.3.2 None
SRR1180179 Pre-XDR-TB lineage3 None
ERR4799443 Pre-XDR-TB lineage1.1.2 in
SRR13232648 Pre-XDR-TB lineage2.2.1 None
ERR7911708 Pre-XDR-TB lineage4.1.1.3 za
ERR5897091 Pre-XDR-TB lineage3 None
ERR5758442 Pre-XDR-TB lineage2.2.2 None
ERR4830767 Pre-XDR-TB lineage4.3 ir
SRR1181321 Pre-XDR-TB lineage4.3.3 None
SRR7755647 Pre-XDR-TB lineage2.2.1 None
ERR5897092 Pre-XDR-TB lineage3 None
ERR2516738 XDR-TB lineage4.1.2.1 pe
SRR14801569 HR-TB lineage4.2.1 None
SRR10379908 XDR-TB lineage4.2.1 None
ERR8975695 Pre-XDR-TB lineage4.3.3 None
SRR924227 Pre-XDR-TB lineage4.3.3 None
ERR9993114 XDR-TB lineage4.1.1.3 None
ERR8975724 XDR-TB lineage4.4.1.1.1 None
SRR847783 Pre-XDR-TB lineage4.3.3 za
ERR2864220 MDR-TB lineage4.2.1 pt
SRR28646097 MDR-TB lineage4.1.2.1 None
SRR28351311 Pre-XDR-TB lineage2.2.1 None
SRR28351416 Pre-XDR-TB lineage4.3.3 None
ERR4798314 Pre-XDR-TB lineage4.2.2.2 in
ERR3794398 Pre-XDR-TB lineage2.2.1 None
SRR24827304 Pre-XDR-TB lineage4.4.1.1 None
SRR1172075 Pre-XDR-TB lineage3 None
ERR5864809 Pre-XDR-TB lineage4.3.3 None
SRR7755689 Pre-XDR-TB lineage2.2.1;lineage4.2.1 None
SRR25827875 Pre-XDR-TB lineage1.2.2.2;lineage2.2.1;lineage3 None
SRR1175492 Pre-XDR-TB lineage2.2.2 None
ERR1035304 MDR-TB lineage4.3.3 br
SRR10379898 Pre-XDR-TB lineage2.2.1 None
SRR6356930 Pre-XDR-TB lineage4.8 None