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SRA data
Rv2780
- c.436_437dupGC
Drug resistance types
0 Sensitive
0 RR-TB
5 HR-TB
18 MDR-TB
143 Pre-XDR-TB
13 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.3.3
38
lineage2.2.1
37
lineage4.2.1
16
lineage2.2.2
16
lineage4.8
15
lineage3
8
lineage4.1.2.1
6
lineage4.1.1.3
6
lineage4.3.2
6
lineage4.4.1.1
5
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
180
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR130106
Pre-XDR-TB
lineage4.5
None
ERR015611
Pre-XDR-TB
lineage2.2.1
None
ERR1035304
MDR-TB
lineage4.3.3
br
ERR1035312
Pre-XDR-TB
lineage4.3.3
br
ERR10748499
XDR-TB
lineage2.2.2
None
ERR10762311
Pre-XDR-TB
lineage2.2.1;lineage4.2.1
None
ERR10762383
Pre-XDR-TB
lineage4.2.1
None
ERR11043789
MDR-TB
lineage4.2.1.1
None
ERR11466311
MDR-TB
lineage4.3.4.2.1
None
ERR11488562
MDR-TB
lineage4.3.4.2.1
None
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