Rv3083 - c.6_*1408del
Drug resistance types
140 Sensitive
4 RR-TB
3 HR-TB
10 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 157 |
| lineage4.8.1 | 6 |
| lineage4.8.2 | 13 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 176 |
Geographic prevalence
Country level data for this variant is available for 71 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7069939 | Sensitive | lineage4.8 | None | ERR2202611 | Sensitive | lineage4.8 | None | ERR978717 | Sensitive | lineage4.8 | gl | SRR6045936 | Sensitive | lineage4.8 | gb | SRR6397952 | Sensitive | lineage4.8 | ca | ERR2517531 | Sensitive | lineage4.8 | nl | SRR7069815 | Sensitive | lineage4.8 | None | SRR4033245 | Sensitive | lineage4.8.1 | None | ERR978777 | Sensitive | lineage4.8 | gl | ERR552415 | MDR-TB | lineage4.8.1 | sz | ERR11243612 | Sensitive | lineage4.8 | None | ERR1633884 | Sensitive | lineage4.8 | za | SRR7069598 | Sensitive | lineage4.8 | None | ERR978659 | Sensitive | lineage4.8 | None | ERR978672 | Sensitive | lineage4.8 | gl | ERR2514479 | Sensitive | lineage4.8.2 | gb | ERR1465924 | Sensitive | lineage4.8 | ch | ERR2228950 | Sensitive | lineage4.8 | dk | SRR3103512 | Sensitive | lineage4.8 | None | ERR553135 | Sensitive | lineage4.8 | de | SRR6981959 | Sensitive | lineage4.8 | None | ERR2514884 | Sensitive | lineage4.8.2 | gb | ERR1633929 | Sensitive | lineage4.8.1 | za | SRR3105730 | MDR-TB | lineage4.8 | None | ERR2486958 | Sensitive | lineage4.8 | None | SRR7070084 | Sensitive | lineage4.8 | None | ERR552698 | Sensitive | lineage4.8 | None | SRR7070422 | Sensitive | lineage4.8 | None | ERR387037 | Sensitive | lineage4.8.2 | None | ERR3287338 | RR-TB | lineage4.8 | pe | ERR553009 | Other | lineage4.8 | None | ERR978688 | Sensitive | lineage4.8 | gl | ERR978781 | Sensitive | lineage4.8 | gl | ERR279502 | Sensitive | lineage4.8 | None | ERR11243633 | Sensitive | lineage4.8 | None | SRR7069888 | Other | lineage4.8 | None | ERR1555039 | RR-TB | lineage4.8 | None | SRR7069199 | Other | lineage4.8 | None | SRR7070486 | Sensitive | lineage4.8 | None | SRR6064836 | Sensitive | lineage4.8 | ca | SRR7069846 | Sensitive | lineage4.8 | None | ERR2513114 | Sensitive | lineage4.8 | gb | SRR7068947 | Sensitive | lineage4.8 | None | ERR027469 | Sensitive | lineage4.8 | ru | ERR1034965 | Sensitive | lineage4.8 | za | SRR7069470 | Sensitive | lineage4.8 | None | ERR3561980 | HR-TB | lineage4.8 | None | SRR2100912 | MDR-TB | lineage4.8 | None | SRR7070172 | Sensitive | lineage4.8 | None | ERR551434 | Sensitive | lineage4.8 | de | ERR552162 | Sensitive | lineage4.8 | None | SRR7592347 | Pre-XDR-TB | lineage4.8 | None | ERR047015 | Sensitive | lineage4.8 | None | ERR234260 | Sensitive | lineage4.8 | None | ERR11243625 | Sensitive | lineage4.8 | None | ERR550938 | Sensitive | lineage4.8 | de | ERR2517651 | Other | lineage4.8 | nl | ERR2229051 | Sensitive | lineage4.8 | dk | ERR552728 | Sensitive | lineage4.8 | None | SRR7069015 | Other | lineage4.8 | None | ERR2517592 | Sensitive | lineage4.8 | nl | ERR2514553 | Sensitive | lineage4.8 | gb | ERR978828 | Sensitive | lineage4.8 | None | SRR7068873 | Other | lineage4.8 | None | SRR7069155 | Sensitive | lineage4.8 | None | SRR7069645 | Sensitive | lineage4.8 | None | ERR2600429 | Sensitive | lineage4.8 | None | SRR7453040 | Sensitive | lineage4.8 | None | SRR7069291 | Sensitive | lineage4.8 | None | SRR6807761 | Sensitive | lineage4.8 | None | SRR6397758 | Sensitive | lineage4.8 | ca | SRR7069087 | Sensitive | lineage4.8 | None | SRR7070009 | Sensitive | lineage4.8 | None | SRR7069730 | Other | lineage4.8 | None | ERR3132118 | Sensitive | lineage4.8 | None | SRR7069177 | Sensitive | lineage4.8 | None | ERR386829 | Sensitive | lineage4.8 | None | ERR978659_ERR978660 | Sensitive | lineage4.8 | None | SRR6061385 | Sensitive | lineage4.8 | ca | SRR1175517 | MDR-TB | lineage4.8 | None | ERR2707073 | RR-TB | lineage4.8 | cd | ERR278525 | MDR-TB | lineage4.8 | None | ERR551551_ERR551550 | Other | lineage4.8 | None | ERR552803 | Sensitive | lineage4.8 | de | SRR10380208 | Sensitive | lineage4.8 | None | ERR1633935 | Sensitive | lineage4.8 | za | ERR023246 | Sensitive | lineage4.8 | None | SRR7068991 | Sensitive | lineage4.8 | None | ERR2202589 | Sensitive | lineage4.8 | None | SRR1159346 | Sensitive | lineage4.8 | None | SRR7069946 | Other | lineage4.8 | None | ERR2514705 | Sensitive | lineage4.8 | gb | ERR2509887 | Sensitive | lineage4.8.2 | gb | ERR11243635 | Sensitive | lineage4.8 | None | SRR6046735 | Sensitive | lineage4.8 | None | ERR2202617 | Sensitive | lineage4.8 | None | SRR6856023 | MDR-TB | lineage4.8.1 | None | ERR2229798 | Sensitive | lineage4.8 | None | ERR911919 | Sensitive | lineage4.8 | None | ERR550759 | Sensitive | lineage4.8 | de | ERR2514656 | Sensitive | lineage4.8 | gb | ERR1465913 | Sensitive | lineage4.8 | mk | ERR2513864 | Sensitive | lineage4.8.2 | gb | ERR2600609 | Other | lineage4.8 | None | ERR1950017 | Sensitive | lineage4.8 | dk | SRR7341677 | MDR-TB | lineage4.8 | ro | ERR1034917 | Sensitive | lineage4.8 | za | SRR6074056 | Sensitive | lineage4.8 | ca | ERR386975 | Sensitive | lineage4.8.2 | None | ERR1034653 | MDR-TB | lineage4.8 | bg | ERR2600550 | Sensitive | lineage4.8 | None | ERR2229008 | Sensitive | lineage4.8 | dk | ERR257893 | Sensitive | lineage4.8 | nl | SRR833004 | MDR-TB | lineage4.8 | None | ERR2517321 | Sensitive | lineage4.8 | nl | ERR2229606 | Sensitive | lineage4.8 | None | SRR7070596 | Other | lineage4.8 | None | ERR067756 | Sensitive | lineage4.8 | ru | ERR2503382 | Sensitive | lineage4.8 | fi | ERR2229281 | Sensitive | lineage4.8 | dk | ERR072050 | Sensitive | lineage4.8.2 | gb | SRR7069013 | Other | lineage4.8 | None | SRR7069971 | Sensitive | lineage4.8 | None | SRR7069864 | Sensitive | lineage4.8 | None | SRR7068876 | Other | lineage4.8 | None | ERR2514551 | Sensitive | lineage4.8 | gb | ERR2517418 | Sensitive | lineage4.8 | nl | ERR978821 | Sensitive | lineage4.8 | gl | SRR10397255 | Sensitive | lineage4.8 | None | SRR7070022 | Other | lineage4.8 | None | ERR234180 | Sensitive | lineage4.8 | vn | SRR833188 | MDR-TB | lineage4.8.1 | None | SRR7069047 | Sensitive | lineage4.8 | None | ERR046755 | Sensitive | lineage4.8.2 | gb | SRR7131193 | Sensitive | lineage4.8 | None | ERR2229218 | Sensitive | lineage4.8 | dk | SRR3103502 | Sensitive | lineage4.8 | None | SRR2100103 | Sensitive | lineage4.8 | None | SRR7069702 | Sensitive | lineage4.8 | None | ERR495157 | Sensitive | lineage4.8.1 | None | SRR7069101 | Sensitive | lineage4.8 | None | ERR161110 | Other | lineage4.8 | mw | SRR1159038 | Sensitive | lineage4.8 | None | ERR403261 | HR-TB | lineage4.8 | None | SRR7070560 | Sensitive | lineage4.8 | None | ERR553314 | HR-TB | lineage4.8 | None | ERR11243592 | Sensitive | lineage4.8 | None | ERR978737 | Sensitive | lineage4.8 | gl | ERR040103 | Sensitive | lineage4.8.2 | gb | ERR067763 | Sensitive | lineage4.8 | ru | SRR7070016 | Sensitive | lineage4.8 | None | SRR5486903 | RR-TB | lineage4.8 | None | SRR9738493 | Pre-XDR-TB | lineage4.8 | None | ERR270628 | Sensitive | lineage4.8.2 | None | ERR046952 | Sensitive | lineage4.8 | gb | ERR072019 | Sensitive | lineage4.8 | gb | SRR7069564 | Sensitive | lineage4.8 | None | ERR978807 | Sensitive | lineage4.8 | gl | SRR7070075 | Other | lineage4.8.2 | None | SRR5266552 | Sensitive | lineage4.8 | None | ERR2228943 | Sensitive | lineage4.8 | dk | SRR7070442 | Sensitive | lineage4.8.2 | None | SAMN02419539 | Sensitive | lineage4.8 | by | ERR031474 | Sensitive | lineage4.8 | None | ERR2516348 | Sensitive | lineage4.8 | be | ERR234221 | Sensitive | lineage4.8 | us | SRR7069751 | Sensitive | lineage4.8 | None | ERR978718 | Sensitive | lineage4.8 | gl | SRR10380067 | Sensitive | lineage4.8 | None | ERR4821170 | Sensitive | lineage4.8 | None | ERR1035191 | Pre-XDR-TB | lineage4.8 | pt | SRR7070170 | Sensitive | lineage4.8 | None | ERR2229352 | Sensitive | lineage4.8 | dk | SRR7070053 | Sensitive | lineage4.8.2 | None | SRR6045209 | Sensitive | lineage4.8 | gb | ERR553360 | Sensitive | lineage4.8 | None |
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