lineage | Count |
---|---|
lineage1.1.1.1 | 2 |
lineage3 | 7 |
lineage4.8 | 3 |
lineage4.3.3 | 2 |
lineage1.1.2 | 5 |
lineage4.2.2.2 | 1 |
lineage4.1.1.1 | 2 |
lineage4.3.4.1 | 3 |
lineage4.1.2.1 | 9 |
lineage4.3.4.2 | 5 |
lineage2.2.1 | 10 |
lineage4.7 | 1 |
lineage4.5 | 2 |
lineage1.2.1.2.1 | 2 |
lineage3.1.2 | 2 |
lineage4.9 | 1 |
lineage2.2.2 | 1 |
lineage1.2.2.2 | 4 |
lineage3.1.2.1 | 1 |
lineage4.1.1 | 1 |
lineage4.3.4.2.1 | 2 |
lineage4.4.1.1 | 1 |
lineage1.2.2.1 | 1 |
lineage4.4.2 | 2 |
lineage2.2.1.1 | 1 |
lineage4 | 1 |
lineage4.1.2 | 2 |
lineage4.4 | 1 |
lineage4.2.2 | 1 |
spoligotype | Count |
---|---|
None | 76 |
ID | Drug resistance | Lineage | Country iso2 | SRR22249655 | Other | lineage1.1.1.1 | None | SRR30182506 | Sensitive | lineage3 | None | SRR18715025 | Sensitive | lineage4.8 | None | SRR22251379 | Sensitive | lineage4.3.3 | None | SRR21733351 | Sensitive | lineage3 | None | SRR25827675 | Sensitive | lineage1.1.2 | None | ERR13388664 | Sensitive | lineage4.2.2.2 | None | SRR28868849 | Sensitive | lineage4.1.1.1 | None | ERR5530521 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR11050583 | Sensitive | lineage4.8 | None | ERR11050491 | Sensitive | lineage4.1.2.1 | None | ERR7764357 | Other | lineage4.3.4.2 | None | ERR11068682 | Sensitive | lineage4.1.2.1 | None | SRR28868552 | Sensitive | lineage2.2.1 | None | ERR11050567 | Sensitive | lineage4.7 | None | SRR28868853 | Other | lineage4.5 | None | SRR22251358 | Sensitive | lineage1.2.1.2.1 | None | ERR7764342 | Sensitive | lineage4.3.4.2 | None | ERR12311989 | Sensitive | lineage4.1.2.1 | None | SRR29440718 | Sensitive | lineage3.1.2 | None | SRR29440817 | Sensitive | lineage4.9 | None | ERR7764363 | Sensitive | lineage4.3.4.2 | None | SRR22251382 | HR-TB | lineage2.2.2 | None | SRR28868844 | Sensitive | lineage3.1.2 | None | SRR22250199 | Sensitive | lineage1.1.2 | None | SRR22250196 | Sensitive | lineage1.2.2.2 | None | SRR21733350 | Sensitive | lineage3.1.2.1 | None | SRR22250135 | Sensitive | lineage1.1.2 | None | SRR22249743 | Sensitive | lineage4.5 | None | SRR18715199 | MDR-TB | lineage2.2.1 | None | ERR11067627 | XDR-TB | lineage2.2.1 | None | SRR26112560 | Sensitive | lineage4.1.1 | None | SRR30182628 | Sensitive | lineage4.1.2.1 | None | ERR5530523 | MDR-TB | lineage4.1.2.1 | None | SRR28868559 | Other | lineage1.1.1.1 | None | ERR11488392 | MDR-TB | lineage4.1.1.1 | None | ERR11488671 | Pre-XDR-TB | lineage4.3.4.2.1 | None | SRR27449996 | Other | lineage3 | None | ERR11050546 | Sensitive | lineage4.4.1.1 | None | SRR27450534 | Sensitive | lineage4.3.4.2.1 | None | SRR29358137 | MDR-TB | lineage2.2.1 | None | SRR30182373 | Other | lineage1.2.2.1 | None | SRR27450420 | Sensitive | lineage4.4.2 | None | SRR25827651 | MDR-TB | lineage2.2.1.1 | None | SRR26558639 | Sensitive | lineage1.2.2.2 | None | ERR7764370 | Sensitive | lineage4.3.4.2 | None | SRR27450546 | Sensitive | lineage1.1.2 | None | ERR12057456 | Sensitive | lineage4.3.4.2 | None | ERR11488679 | MDR-TB | lineage4.1.2.1 | None | ERR7764328 | HR-TB | lineage4.3.4.1 | None | SRR22249487 | Sensitive | lineage4.1.2.1 | None | SRR24255950 | MDR-TB | lineage2.2.1 | None | SRR24256382 | MDR-TB | lineage2.2.1 | None | SRR18714983 | Sensitive | lineage4.1.2.1 | None | SRR22249812 | Sensitive | lineage4 | None | SRR22249912 | HR-TB | lineage4.3.3 | None | SRR18714799 | Sensitive | lineage4.3.4.1 | None | ERR11488860 | MDR-TB | lineage4.1.2 | None | SRR18715063 | MDR-TB | lineage2.2.1 | None | SRR22251380 | Sensitive | lineage1.2.2.2 | None | SRR22251381 | Sensitive | lineage1.2.1.2.1 | None | SRR28868458 | Other | lineage4.4 | None | SRR22251143 | Sensitive | lineage1.1.2 | None | DRR473831 | HR-TB | lineage4.2.2 | None | SRR21733343 | Sensitive | lineage2.2.1 | None | SRR28868740 | Sensitive | lineage3 | None | SRR22251486 | Sensitive | lineage3 | None | SRR22250130 | Sensitive | lineage1.2.2.2 | None | SRR29126236 | Sensitive | lineage4.1.2.1 | None | ERR11043749 | Sensitive | lineage2.2.1 | None | SRR28868459 | Sensitive | lineage4.4.2 | None | ERR11488412 | Pre-XDR-TB | lineage4.8 | None | SRR22249491 | HR-TB | lineage2.2.1 | None | SRR22250186 | Sensitive | lineage3 | None | ERR11050707 | Sensitive | lineage3 | None | ERR11050791 | Sensitive | lineage4.1.2 | None |
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