Rv3261 - c.-201C>T


Drug resistance types
110 Sensitive 16 RR-TB 21 HR-TB 87 MDR-TB 32 Pre-XDR-TB 0 XDR-TB 10 Other
lineage Counts
lineage Count
lineage2.2.1 274
lineage2.2.1;lineage4 2
spoligotype Counts
spoligotype Count
None 276
Geographic prevalence
Country level data for this variant is available for 48 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR24799226 MDR-TB lineage2.2.1 None
SRR671730 Sensitive lineage2.2.1 cn
SRR12420813 Other lineage2.2.1 None
SRR12420679 MDR-TB lineage2.2.1 None
ERR4811288 Pre-XDR-TB lineage2.2.1 cn
SRR12420452 MDR-TB lineage2.2.1 None
ERR4811280 Pre-XDR-TB lineage2.2.1 cn
ERR4810948 Pre-XDR-TB lineage2.2.1 cn
SRR12420605 Sensitive lineage2.2.1 None
DRR034442 HR-TB lineage2.2.1 None
SRR8237312 MDR-TB lineage2.2.1 np
SRR12420545 MDR-TB lineage2.2.1 None
SRR21279455 Sensitive lineage2.2.1 None
SRR21727555 Sensitive lineage2.2.1 None
SRR12420325 MDR-TB lineage2.2.1 None
ERR502957 MDR-TB lineage2.2.1 None
SRR19612245 MDR-TB lineage2.2.1 None
SRR12420379 Sensitive lineage2.2.1;lineage4 None
ERR1367615 Pre-XDR-TB lineage2.2.1 None
SRR21727764 HR-TB lineage2.2.1 None
SRR7517805 Pre-XDR-TB lineage2.2.1 None
SRR12420629 MDR-TB lineage2.2.1 None
ERR11083081 Sensitive lineage2.2.1 None
SRR12420697 MDR-TB lineage2.2.1 None
SRR12420667 Sensitive lineage2.2.1 None
ERR4811653 Sensitive lineage2.2.1 cn
SRR12420291 Other lineage2.2.1 None
SRR12420704 Sensitive lineage2.2.1 None
SRR12420776 Sensitive lineage2.2.1 None
SRR12420638 RR-TB lineage2.2.1 None
SRR12420484 Sensitive lineage2.2.1 None
SRR12420465 MDR-TB lineage2.2.1 None
SRR1723485 MDR-TB lineage2.2.1 None
SRR12420657 Sensitive lineage2.2.1 None
SRR12420702 Pre-XDR-TB lineage2.2.1 None
SRR25206952 Pre-XDR-TB lineage2.2.1 None
SRR671765 MDR-TB lineage2.2.1 cn
SRR12420450 Pre-XDR-TB lineage2.2.1 None
SRR12420335 MDR-TB lineage2.2.1 None
SRR25206977 Pre-XDR-TB lineage2.2.1 None
SRR12420572 Sensitive lineage2.2.1 None
ERR4811287 MDR-TB lineage2.2.1 cn
SRR10305651 MDR-TB lineage2.2.1 None
SRR15316599 Sensitive lineage2.2.1 None
SRR12420418 RR-TB lineage2.2.1 None
SRR12420684 RR-TB lineage2.2.1 None
SRR12420797 MDR-TB lineage2.2.1 None
SRR12420642 MDR-TB lineage2.2.1 None
SRR671747 Sensitive lineage2.2.1 cn
SRR14088385 Pre-XDR-TB lineage2.2.1 None
SRR12420550 Sensitive lineage2.2.1 None
SRR12420371 Sensitive lineage2.2.1 None
SRR12420554 Sensitive lineage2.2.1 None
SRR10305828 MDR-TB lineage2.2.1 None
ERR4811310 Pre-XDR-TB lineage2.2.1 cn
SRR12420448 Other lineage2.2.1 None
SRR12420686 Sensitive lineage2.2.1 None
SRR12420669 HR-TB lineage2.2.1 None
SRR12420536 MDR-TB lineage2.2.1 None
SRR23691423 MDR-TB lineage2.2.1 None
SRR12420780 MDR-TB lineage2.2.1 None
SRR12420405 MDR-TB lineage2.2.1 None
SRR12420808 MDR-TB lineage2.2.1 None
SRR12420312 Sensitive lineage2.2.1 None
SRR12420420 RR-TB lineage2.2.1 None
SRR12420633 Sensitive lineage2.2.1 None
SRR23691333 Other lineage2.2.1 None
SRR12420348 Sensitive lineage2.2.1 None
SRR12420453 RR-TB lineage2.2.1 None
SRR12420490 HR-TB lineage2.2.1 None
SRR12420652 HR-TB lineage2.2.1 None
SRR12420467 MDR-TB lineage2.2.1 None
SRR21689669 Sensitive lineage2.2.1 None
ERR1367641 HR-TB lineage2.2.1 None
SRR12420368 Sensitive lineage2.2.1 None
SRR12420296 Sensitive lineage2.2.1 None
SRR22249630 HR-TB lineage2.2.1 None
SRR12420345 MDR-TB lineage2.2.1 None
SRR12420401 RR-TB lineage2.2.1 None
SRR12420457 MDR-TB lineage2.2.1 None
ERR4797230 HR-TB lineage2.2.1 in
SRR12420779 Sensitive lineage2.2.1 None
SRR12420775 Sensitive lineage2.2.1 None
SRR12420481 MDR-TB lineage2.2.1 None
SRR18911228 Sensitive lineage2.2.1 None
ERR4811337 MDR-TB lineage2.2.1 cn
SRR12420681 Sensitive lineage2.2.1 None
SRR12420370 RR-TB lineage2.2.1 None
SRR12420430 Sensitive lineage2.2.1 None
SRR12420419 MDR-TB lineage2.2.1 None
ERR4810956 MDR-TB lineage2.2.1 cn
SRR12420542 Sensitive lineage2.2.1 None
SRR12420431 MDR-TB lineage2.2.1 None
SRR12420464 MDR-TB lineage2.2.1 None
ERR4797234 MDR-TB lineage2.2.1 in
SRR22251330 Sensitive lineage2.2.1 None
SRR12420537 Sensitive lineage2.2.1 None
SRR12420760 Sensitive lineage2.2.1 None
SRR12420745 Pre-XDR-TB lineage2.2.1 None
SRR12420659 HR-TB lineage2.2.1 None
SRR6480369 Sensitive lineage2.2.1 None
SRR12420380 Sensitive lineage2.2.1 None
SRR12420358 Sensitive lineage2.2.1 None
SRR25207079 Pre-XDR-TB lineage2.2.1 None
SRR12420553 Sensitive lineage2.2.1 None
SRR15723127 Sensitive lineage2.2.1 None
SRR25206936 Pre-XDR-TB lineage2.2.1 None
SRR12420411 Sensitive lineage2.2.1 None
SRR15369073 Sensitive lineage2.2.1 None
SRR12420283 Sensitive lineage2.2.1 None
SRR12420365 Pre-XDR-TB lineage2.2.1 None
ERR4810995 MDR-TB lineage2.2.1 cn
SRR12420770 Sensitive lineage2.2.1 None
SRR12420279 Sensitive lineage2.2.1 None
ERR4811610 Sensitive lineage2.2.1 cn
ERR4810793 Pre-XDR-TB lineage2.2.1 cn
SRR12420292 Sensitive lineage2.2.1 None
SRR12420428 MDR-TB lineage2.2.1 None
ERR502958 MDR-TB lineage2.2.1 None
SRR12420748 RR-TB lineage2.2.1 None
SRR671727 MDR-TB lineage2.2.1 cn
SRR12420710 HR-TB lineage2.2.1 None
SRR12420499 Sensitive lineage2.2.1 None
SRR25207346 MDR-TB lineage2.2.1 None
SRR12420425 Sensitive lineage2.2.1 None
SRR12420483 Other lineage2.2.1 None
SRR12420259 Sensitive lineage2.2.1 None
ERR4797231 Sensitive lineage2.2.1 in
SRR12420458 HR-TB lineage2.2.1 None
SRR12420328 MDR-TB lineage2.2.1 None
ERR4811295 Pre-XDR-TB lineage2.2.1 cn
SRR12420784 Sensitive lineage2.2.1;lineage4 None
SAMN03246244 MDR-TB lineage2.2.1 cn
SRR12420363 Other lineage2.2.1 None
SRR12420735 Sensitive lineage2.2.1 None
SRR16058083 Sensitive lineage2.2.1 None
ERR4798644 MDR-TB lineage2.2.1 None
ERR4810933 MDR-TB lineage2.2.1 cn
SRR25206961 Pre-XDR-TB lineage2.2.1 None
SRR12420285 Sensitive lineage2.2.1 None
SRR12420634 RR-TB lineage2.2.1 None
SRR12420502 Sensitive lineage2.2.1 None
SRR12420814 MDR-TB lineage2.2.1 None
ERR9125161 Sensitive lineage2.2.1 None
SRR25207223 MDR-TB lineage2.2.1 None
SRR12420787 Sensitive lineage2.2.1 None
SRR12420726 HR-TB lineage2.2.1 None
SRR12420500 Sensitive lineage2.2.1 None
SRR12420592 MDR-TB lineage2.2.1 None
SRR12420759 RR-TB lineage2.2.1 None
ERR3276138 Sensitive lineage2.2.1 nl
SRR12420696 Sensitive lineage2.2.1 None
SRR12420454 Sensitive lineage2.2.1 None
SRR671840 MDR-TB lineage2.2.1 cn
SRR7517806 MDR-TB lineage2.2.1 ch
SRR12420825 HR-TB lineage2.2.1 None
SRR671728 RR-TB lineage2.2.1 cn
ERR4829142 Pre-XDR-TB lineage2.2.1 pk
ERR12554685 HR-TB lineage2.2.1 None
ERR4799068 Pre-XDR-TB lineage2.2.1 in
ERR4797227 Pre-XDR-TB lineage2.2.1 in
SRR12420276 MDR-TB lineage2.2.1 None
SRR12420741 Sensitive lineage2.2.1 None
SRR12420600 Sensitive lineage2.2.1 None
SRR12420364 Sensitive lineage2.2.1 None
SRR12420323 Pre-XDR-TB lineage2.2.1 None
SRR12420692 MDR-TB lineage2.2.1 None
SRR12420400 Pre-XDR-TB lineage2.2.1 None
SRR20970031 Sensitive lineage2.2.1 None
SRR25207369 Pre-XDR-TB lineage2.2.1 None
SRR12420582 Sensitive lineage2.2.1 None
SRR12420549 Sensitive lineage2.2.1 None
SRR25207071 MDR-TB lineage2.2.1 None
SRR671733 MDR-TB lineage2.2.1 cn
SRR26112612 Sensitive lineage2.2.1 None
SRR25207387 MDR-TB lineage2.2.1 None
SRR10305988 MDR-TB lineage2.2.1 None
SRR12420820 Sensitive lineage2.2.1 None
SRR12420275 RR-TB lineage2.2.1 None
SRR1723484 MDR-TB lineage2.2.1 None
SRR10305774 Sensitive lineage2.2.1 None
SRR12420531 MDR-TB lineage2.2.1 None
SRR12420333 HR-TB lineage2.2.1 None
SRR13180408 Sensitive lineage2.2.1 None
SRR12420752 MDR-TB lineage2.2.1 None
SRR6824545 MDR-TB lineage2.2.1 cn
SRR12420763 MDR-TB lineage2.2.1 None
SRR12420265 MDR-TB lineage2.2.1 None
SRR12420687 Sensitive lineage2.2.1 None
ERR4810867 MDR-TB lineage2.2.1 cn
SRR12420663 MDR-TB lineage2.2.1 None
SRR12420790 HR-TB lineage2.2.1 None
SRR12420719 MDR-TB lineage2.2.1 None
SAMN03246245 MDR-TB lineage2.2.1 cn
ERR4831479 Pre-XDR-TB lineage2.2.1 None
SRR12420655 HR-TB lineage2.2.1 None
SRR1723486 MDR-TB lineage2.2.1 None
SRR21689934 Sensitive lineage2.2.1 None
ERR11081976 Sensitive lineage2.2.1 None
ERR4810791 Pre-XDR-TB lineage2.2.1 cn
SRR12420577 Sensitive lineage2.2.1 None
SRR10040152 Pre-XDR-TB lineage2.2.1 None
SRR12420373 Sensitive lineage2.2.1 None
SRR12420286 RR-TB lineage2.2.1 None
ERR4811298 Pre-XDR-TB lineage2.2.1 cn
SRR12420318 Other lineage2.2.1 None
SRR10305949 Sensitive lineage2.2.1 None
SRR12420666 Sensitive lineage2.2.1 None
SRR12420615 Sensitive lineage2.2.1 None
SRR10040416 MDR-TB lineage2.2.1 None
SRR1723487 MDR-TB lineage2.2.1 None
ERR4811641 Sensitive lineage2.2.1 cn
SRR12420698 Sensitive lineage2.2.1 None
SRR12420525 MDR-TB lineage2.2.1 None
SRR12420294 MDR-TB lineage2.2.1 None
SRR12420375 MDR-TB lineage2.2.1 None
SRR21690427 Sensitive lineage2.2.1 None
SRR12420444 RR-TB lineage2.2.1 None
SRR12420272 RR-TB lineage2.2.1 None
SRR12420721 Sensitive lineage2.2.1 None
SRR12420828 Sensitive lineage2.2.1 None
ERR3276038 Sensitive lineage2.2.1 nl
SRR12420766 MDR-TB lineage2.2.1 None
SRR6824345 MDR-TB lineage2.2.1 cn
SRR12420445 MDR-TB lineage2.2.1 None
SRR12420398 Sensitive lineage2.2.1 None
SRR12420777 Sensitive lineage2.2.1 None
SRR15316611 Sensitive lineage2.2.1 None
SRR12420403 Sensitive lineage2.2.1 None
ERR2516261 MDR-TB lineage2.2.1 be
SRR12420635 MDR-TB lineage2.2.1 None
SRR12420801 HR-TB lineage2.2.1 None
SRR12420621 Sensitive lineage2.2.1 None
SRR12420689 Sensitive lineage2.2.1 None
SRR12420399 Sensitive lineage2.2.1 None
SRR15315713 HR-TB lineage2.2.1 None
SRR12420510 Sensitive lineage2.2.1 None
SRR21690663 Sensitive lineage2.2.1 None
SRR12420522 Sensitive lineage2.2.1 None
SRR12420439 Other lineage2.2.1 None
SRR25207104 MDR-TB lineage2.2.1 None
SRR12420712 Sensitive lineage2.2.1 None
SRR12420783 Sensitive lineage2.2.1 None
SRR12420715 MDR-TB lineage2.2.1 None
SRR12420627 Other lineage2.2.1 None
ERR3273119 MDR-TB lineage2.2.1 None
ERR4797233 HR-TB lineage2.2.1 in
SRR12420519 Pre-XDR-TB lineage2.2.1 None
ERR4810934 MDR-TB lineage2.2.1 cn
SRR18054775 MDR-TB lineage2.2.1 None
SRR12420310 MDR-TB lineage2.2.1 None
SRR12420593 Sensitive lineage2.2.1 None
SRR12420757 Sensitive lineage2.2.1 None
SRR671737 MDR-TB lineage2.2.1 cn
SRR12420462 RR-TB lineage2.2.1 None
SRR12420352 Sensitive lineage2.2.1 None
SRR10305840 Sensitive lineage2.2.1 None
SRR15014627 MDR-TB lineage2.2.1 None
SRR12420493 Sensitive lineage2.2.1 None
SRR25207070 Pre-XDR-TB lineage2.2.1 None
SRR12420789 Sensitive lineage2.2.1 None
SRR1710082 Sensitive lineage2.2.1 cn
SRR12420607 Sensitive lineage2.2.1 None
SRR12420331 Pre-XDR-TB lineage2.2.1 None
SRR12420675 Other lineage2.2.1 None
ERR2516413 MDR-TB lineage2.2.1 nl
SRR12420753 Sensitive lineage2.2.1 None
SRR6824639 MDR-TB lineage2.2.1 cn
ERR4797237 Sensitive lineage2.2.1 in
SRR25206949 Pre-XDR-TB lineage2.2.1 None
ERR3276234 Sensitive lineage2.2.1 nl
SRR6824503 MDR-TB lineage2.2.1 cn
SRR15316073 Sensitive lineage2.2.1 None
SRR25207365 MDR-TB lineage2.2.1 None
SRR12420660 Sensitive lineage2.2.1 None
SRR15723130 HR-TB lineage2.2.1 None