Rv3261 - c.-201C>T
Drug resistance types
117 Sensitive
16 RR-TB
21 HR-TB
88 MDR-TB
34 Pre-XDR-TB
1 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 285 |
| lineage2.2.1;lineage4 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 287 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25207070 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266015 | Sensitive | lineage2.2.1 | None | ERR4810934 | MDR-TB | lineage2.2.1 | cn | SRR25206936 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420669 | HR-TB | lineage2.2.1 | None | SRR12420536 | MDR-TB | lineage2.2.1 | None | ERR13266213 | Sensitive | lineage2.2.1 | None | ERR4797231 | Sensitive | lineage2.2.1 | in | SRR12420780 | MDR-TB | lineage2.2.1 | None | ERR3276038 | Sensitive | lineage2.2.1 | nl | SRR12420531 | MDR-TB | lineage2.2.1 | None | SRR12420572 | Sensitive | lineage2.2.1 | None | SRR12420667 | Sensitive | lineage2.2.1 | None | SRR12420745 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420697 | MDR-TB | lineage2.2.1 | None | SRR12420820 | Sensitive | lineage2.2.1 | None | SRR12420510 | Sensitive | lineage2.2.1 | None | SRR6824345 | MDR-TB | lineage2.2.1 | cn | SRR7517805 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420439 | Other | lineage2.2.1 | None | ERR4811298 | Pre-XDR-TB | lineage2.2.1 | cn | SRR12420607 | Sensitive | lineage2.2.1 | None | SRR12420296 | Sensitive | lineage2.2.1 | None | ERR4797233 | HR-TB | lineage2.2.1 | in | SRR21727555 | Sensitive | lineage2.2.1 | None | SRR20970031 | Sensitive | lineage2.2.1 | None | SRR26112612 | Sensitive | lineage2.2.1 | None | SRR29772763 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267114 | XDR-TB | lineage2.2.1 | None | SRR12420735 | Sensitive | lineage2.2.1 | None | SRR12420283 | Sensitive | lineage2.2.1 | None | SRR12420615 | Sensitive | lineage2.2.1 | None | SRR12420759 | RR-TB | lineage2.2.1 | None | SRR12420499 | Sensitive | lineage2.2.1 | None | SRR12420660 | Sensitive | lineage2.2.1 | None | SRR12420726 | HR-TB | lineage2.2.1 | None | SRR25207369 | Pre-XDR-TB | lineage2.2.1 | None | ERR12554685 | HR-TB | lineage2.2.1 | None | ERR13266355 | Sensitive | lineage2.2.1 | None | SRR6824503 | MDR-TB | lineage2.2.1 | cn | SRR671840 | MDR-TB | lineage2.2.1 | cn | SRR12420825 | HR-TB | lineage2.2.1 | None | SRR12420801 | HR-TB | lineage2.2.1 | None | SRR12420741 | Sensitive | lineage2.2.1 | None | ERR4811641 | Sensitive | lineage2.2.1 | cn | ERR502957 | MDR-TB | lineage2.2.1 | None | SRR12420519 | Pre-XDR-TB | lineage2.2.1 | None | ERR1367641 | HR-TB | lineage2.2.1 | None | SRR25207365 | MDR-TB | lineage2.2.1 | None | SRR671733 | MDR-TB | lineage2.2.1 | cn | SRR12420467 | MDR-TB | lineage2.2.1 | None | ERR4810793 | Pre-XDR-TB | lineage2.2.1 | cn | SRR12420310 | MDR-TB | lineage2.2.1 | None | ERR3273119 | MDR-TB | lineage2.2.1 | None | SRR12420681 | Sensitive | lineage2.2.1 | None | SRR12420813 | Other | lineage2.2.1 | None | SRR12420582 | Sensitive | lineage2.2.1 | None | SRR16058083 | Sensitive | lineage2.2.1 | None | SRR25207387 | MDR-TB | lineage2.2.1 | None | ERR4797230 | HR-TB | lineage2.2.1 | in | ERR9125161 | Sensitive | lineage2.2.1 | None | SRR12420452 | MDR-TB | lineage2.2.1 | None | ERR4810948 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810956 | MDR-TB | lineage2.2.1 | cn | SRR12420542 | Sensitive | lineage2.2.1 | None | SRR12420431 | MDR-TB | lineage2.2.1 | None | SRR6824545 | MDR-TB | lineage2.2.1 | cn | SRR15014627 | MDR-TB | lineage2.2.1 | None | ERR4797234 | MDR-TB | lineage2.2.1 | in | SRR12420663 | MDR-TB | lineage2.2.1 | None | SRR12420345 | MDR-TB | lineage2.2.1 | None | SRR12420752 | MDR-TB | lineage2.2.1 | None | SRR12420380 | Sensitive | lineage2.2.1 | None | SRR12420577 | Sensitive | lineage2.2.1 | None | SRR12420286 | RR-TB | lineage2.2.1 | None | SRR12420657 | Sensitive | lineage2.2.1 | None | SRR671765 | MDR-TB | lineage2.2.1 | cn | SRR12420450 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516261 | MDR-TB | lineage2.2.1 | be | SRR12420770 | Sensitive | lineage2.2.1 | None | SRR12420635 | MDR-TB | lineage2.2.1 | None | SRR12420698 | Sensitive | lineage2.2.1 | None | SRR12420292 | Sensitive | lineage2.2.1 | None | SRR25206977 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420294 | MDR-TB | lineage2.2.1 | None | ERR502958 | MDR-TB | lineage2.2.1 | None | ERR4811610 | Sensitive | lineage2.2.1 | cn | SRR12420748 | RR-TB | lineage2.2.1 | None | SRR12420721 | Sensitive | lineage2.2.1 | None | SRR12420828 | Sensitive | lineage2.2.1 | None | SRR12420371 | Sensitive | lineage2.2.1 | None | SRR12420370 | RR-TB | lineage2.2.1 | None | SRR12420766 | MDR-TB | lineage2.2.1 | None | SRR12420797 | MDR-TB | lineage2.2.1 | None | SRR12420642 | MDR-TB | lineage2.2.1 | None | SRR671747 | Sensitive | lineage2.2.1 | cn | SRR12420777 | Sensitive | lineage2.2.1 | None | SRR10305840 | Sensitive | lineage2.2.1 | None | ERR4811310 | Pre-XDR-TB | lineage2.2.1 | cn | SRR12420448 | Other | lineage2.2.1 | None | ERR4798644 | MDR-TB | lineage2.2.1 | None | ERR4810933 | MDR-TB | lineage2.2.1 | cn | SRR12420312 | Sensitive | lineage2.2.1 | None | SRR10305949 | Sensitive | lineage2.2.1 | None | SRR12420814 | MDR-TB | lineage2.2.1 | None | SRR12420465 | MDR-TB | lineage2.2.1 | None | SRR12420430 | Sensitive | lineage2.2.1 | None | SRR12420710 | HR-TB | lineage2.2.1 | None | ERR3276138 | Sensitive | lineage2.2.1 | nl | SRR12420490 | HR-TB | lineage2.2.1 | None | SRR12420783 | Sensitive | lineage2.2.1 | None | SRR12420652 | HR-TB | lineage2.2.1 | None | SRR30180263 | MDR-TB | lineage2.2.1 | None | ERR4799068 | Pre-XDR-TB | lineage2.2.1 | in | SRR1710082 | Sensitive | lineage2.2.1 | cn | SRR1723485 | MDR-TB | lineage2.2.1 | None | SRR18911228 | Sensitive | lineage2.2.1 | None | SRR8237312 | MDR-TB | lineage2.2.1 | np | ERR1367615 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723486 | MDR-TB | lineage2.2.1 | None | SRR12420400 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420453 | RR-TB | lineage2.2.1 | None | SRR12420462 | RR-TB | lineage2.2.1 | None | SRR12420483 | Other | lineage2.2.1 | None | ERR4811288 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811295 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN03246245 | MDR-TB | lineage2.2.1 | cn | SRR21689934 | Sensitive | lineage2.2.1 | None | SRR22251330 | Sensitive | lineage2.2.1 | None | SRR12420549 | Sensitive | lineage2.2.1 | None | SRR12420593 | Sensitive | lineage2.2.1 | None | SRR12420692 | MDR-TB | lineage2.2.1 | None | SRR12420553 | Sensitive | lineage2.2.1 | None | SRR15723130 | HR-TB | lineage2.2.1 | None | ERR4797227 | Pre-XDR-TB | lineage2.2.1 | in | SRR18054775 | MDR-TB | lineage2.2.1 | None | SRR12420757 | Sensitive | lineage2.2.1 | None | SRR12420379 | Sensitive | lineage2.2.1;lineage4 | None | SRR12420484 | Sensitive | lineage2.2.1 | None | SRR12420702 | Pre-XDR-TB | lineage2.2.1 | None | SRR671737 | MDR-TB | lineage2.2.1 | cn | DRR034442 | HR-TB | lineage2.2.1 | None | SRR12420399 | Sensitive | lineage2.2.1 | None | SRR12420753 | Sensitive | lineage2.2.1 | None | ERR2516413 | MDR-TB | lineage2.2.1 | nl | SRR25206949 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420457 | MDR-TB | lineage2.2.1 | None | SRR10305988 | MDR-TB | lineage2.2.1 | None | SRR12420291 | Other | lineage2.2.1 | None | SRR12420364 | Sensitive | lineage2.2.1 | None | SRR12420775 | Sensitive | lineage2.2.1 | None | SRR12420368 | Sensitive | lineage2.2.1 | None | SRR12420373 | Sensitive | lineage2.2.1 | None | SRR12420405 | MDR-TB | lineage2.2.1 | None | SRR12420525 | MDR-TB | lineage2.2.1 | None | SRR12420634 | RR-TB | lineage2.2.1 | None | ERR4811337 | MDR-TB | lineage2.2.1 | cn | SRR25206952 | Pre-XDR-TB | lineage2.2.1 | None | SRR671727 | MDR-TB | lineage2.2.1 | cn | SRR21727764 | HR-TB | lineage2.2.1 | None | SRR12420679 | MDR-TB | lineage2.2.1 | None | SRR10305774 | Sensitive | lineage2.2.1 | None | SRR12420605 | Sensitive | lineage2.2.1 | None | SRR12420522 | Sensitive | lineage2.2.1 | None | SRR25207079 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180408 | Sensitive | lineage2.2.1 | None | SRR12420325 | MDR-TB | lineage2.2.1 | None | SRR19612245 | MDR-TB | lineage2.2.1 | None | SRR12420458 | HR-TB | lineage2.2.1 | None | SRR12420493 | Sensitive | lineage2.2.1 | None | SRR12420502 | Sensitive | lineage2.2.1 | None | SRR12420464 | MDR-TB | lineage2.2.1 | None | SRR12420687 | Sensitive | lineage2.2.1 | None | SRR12420790 | HR-TB | lineage2.2.1 | None | SRR12420629 | MDR-TB | lineage2.2.1 | None | SRR12420272 | RR-TB | lineage2.2.1 | None | SRR12420712 | Sensitive | lineage2.2.1 | None | ERR4810791 | Pre-XDR-TB | lineage2.2.1 | cn | SRR12420638 | RR-TB | lineage2.2.1 | None | SRR15723127 | Sensitive | lineage2.2.1 | None | SRR12420666 | Sensitive | lineage2.2.1 | None | SRR12420365 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810995 | MDR-TB | lineage2.2.1 | cn | SRR12420554 | Sensitive | lineage2.2.1 | None | SRR21279455 | Sensitive | lineage2.2.1 | None | SRR1723487 | MDR-TB | lineage2.2.1 | None | SRR12420760 | Sensitive | lineage2.2.1 | None | SRR12420348 | Sensitive | lineage2.2.1 | None | SRR12420545 | MDR-TB | lineage2.2.1 | None | ERR11083081 | Sensitive | lineage2.2.1 | None | ERR13265906 | Sensitive | lineage2.2.1 | None | SRR671730 | Sensitive | lineage2.2.1 | cn | SRR12420444 | RR-TB | lineage2.2.1 | None | SRR12420684 | RR-TB | lineage2.2.1 | None | SRR23691423 | MDR-TB | lineage2.2.1 | None | ERR13265245 | Sensitive | lineage2.2.1 | None | SRR12420335 | MDR-TB | lineage2.2.1 | None | SRR12420500 | Sensitive | lineage2.2.1 | None | SRR12420689 | Sensitive | lineage2.2.1 | None | SAMN03246244 | MDR-TB | lineage2.2.1 | cn | SRR12420328 | MDR-TB | lineage2.2.1 | None | SRR12420375 | MDR-TB | lineage2.2.1 | None | SRR12420550 | Sensitive | lineage2.2.1 | None | SRR12420808 | MDR-TB | lineage2.2.1 | None | SRR21689669 | Sensitive | lineage2.2.1 | None | SRR12420318 | Other | lineage2.2.1 | None | SRR21690663 | Sensitive | lineage2.2.1 | None | SRR12420420 | RR-TB | lineage2.2.1 | None | SRR12420787 | Sensitive | lineage2.2.1 | None | SRR12420592 | MDR-TB | lineage2.2.1 | None | SRR12420454 | Sensitive | lineage2.2.1 | None | ERR4811280 | Pre-XDR-TB | lineage2.2.1 | cn | SRR30182869 | Sensitive | lineage2.2.1 | None | SRR12420715 | MDR-TB | lineage2.2.1 | None | ERR4831479 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420425 | Sensitive | lineage2.2.1 | None | SRR12420655 | HR-TB | lineage2.2.1 | None | SRR7517806 | MDR-TB | lineage2.2.1 | ch | SRR12420627 | Other | lineage2.2.1 | None | SRR671728 | RR-TB | lineage2.2.1 | cn | SRR25206961 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829142 | Pre-XDR-TB | lineage2.2.1 | pk | SRR29440712 | Sensitive | lineage2.2.1 | None | SRR12420445 | MDR-TB | lineage2.2.1 | None | ERR4810867 | MDR-TB | lineage2.2.1 | cn | SRR10040152 | Pre-XDR-TB | lineage2.2.1 | None | SRR15315713 | HR-TB | lineage2.2.1 | None | SRR15316073 | Sensitive | lineage2.2.1 | None | SRR12420276 | MDR-TB | lineage2.2.1 | None | SRR12420352 | Sensitive | lineage2.2.1 | None | SRR12420704 | Sensitive | lineage2.2.1 | None | SRR12420789 | Sensitive | lineage2.2.1 | None | SRR15316611 | Sensitive | lineage2.2.1 | None | SRR12420259 | Sensitive | lineage2.2.1 | None | SRR12420285 | Sensitive | lineage2.2.1 | None | SRR12420331 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420398 | Sensitive | lineage2.2.1 | None | SRR12420411 | Sensitive | lineage2.2.1 | None | SRR12420633 | Sensitive | lineage2.2.1 | None | SRR12420265 | MDR-TB | lineage2.2.1 | None | SRR12420696 | Sensitive | lineage2.2.1 | None | SRR12420719 | MDR-TB | lineage2.2.1 | None | SRR12420600 | Sensitive | lineage2.2.1 | None | SRR12420323 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420675 | Other | lineage2.2.1 | None | SRR12420363 | Other | lineage2.2.1 | None | ERR4797237 | Sensitive | lineage2.2.1 | in | SRR6824639 | MDR-TB | lineage2.2.1 | cn | SRR12420401 | RR-TB | lineage2.2.1 | None | SRR6480369 | Sensitive | lineage2.2.1 | None | ERR3276234 | Sensitive | lineage2.2.1 | nl | SRR12420659 | HR-TB | lineage2.2.1 | None | SRR12420686 | Sensitive | lineage2.2.1 | None | SRR12420763 | MDR-TB | lineage2.2.1 | None | SRR12420481 | MDR-TB | lineage2.2.1 | None | SRR12420275 | RR-TB | lineage2.2.1 | None | SRR24799226 | MDR-TB | lineage2.2.1 | None | SRR12420333 | HR-TB | lineage2.2.1 | None | SRR22249630 | HR-TB | lineage2.2.1 | None | SRR23691333 | Other | lineage2.2.1 | None | SRR12420419 | MDR-TB | lineage2.2.1 | None | SRR12420784 | Sensitive | lineage2.2.1;lineage4 | None | SRR25207104 | MDR-TB | lineage2.2.1 | None | ERR4811653 | Sensitive | lineage2.2.1 | cn | SRR12420621 | Sensitive | lineage2.2.1 | None | SRR12420779 | Sensitive | lineage2.2.1 | None | SRR1723484 | MDR-TB | lineage2.2.1 | None | SRR12420537 | Sensitive | lineage2.2.1 | None | SRR10305651 | MDR-TB | lineage2.2.1 | None | SRR10305828 | MDR-TB | lineage2.2.1 | None | SRR12420776 | Sensitive | lineage2.2.1 | None | SRR12420358 | Sensitive | lineage2.2.1 | None | SRR10040416 | MDR-TB | lineage2.2.1 | None | SRR12420279 | Sensitive | lineage2.2.1 | None | SRR12420403 | Sensitive | lineage2.2.1 | None | SRR12420428 | MDR-TB | lineage2.2.1 | None | SRR15369073 | Sensitive | lineage2.2.1 | None | ERR11081976 | Sensitive | lineage2.2.1 | None | SRR21690427 | Sensitive | lineage2.2.1 | None | ERR4811287 | MDR-TB | lineage2.2.1 | cn | SRR29289349 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316599 | Sensitive | lineage2.2.1 | None | SRR25207223 | MDR-TB | lineage2.2.1 | None | SRR12420418 | RR-TB | lineage2.2.1 | None | SRR25207346 | MDR-TB | lineage2.2.1 | None | SRR25207071 | MDR-TB | lineage2.2.1 | None | SRR14088385 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
